Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          --------->REM1(1)                                       <-------TEIL                          --------->LBD16                         <---------HSFB2a(2)                         --------->HSFB2a(2)          <---------At4g35610           -------->P    <---------HSFC1(1)    <---------ICU4 -->ARR11(3)             --------->HSFC1(1) --------->WOX13(1)                                     <- ---ARR11(3)   ------>MYB83         --------->At4g35610          <-----------RAV1(1)               <- ---ARR14(3)   ------>MYB46(1)      --------->ZAT2    --------->At4g35610      <---------TOE2(2)   <- -->ARR14(3)  --------->WOX13(1)--------->MYB52(1)    <---------ZAT2  <------NtERF2      <---------REM1(1)   ttctctccagacttaccaatctcatttccagaaataccagcttcatcaatcttggcagatgggtcttctggtggccaaacgctggttttagatgtagaga  24669600                                                                                            ------>ZmHOX2a(1)                                                                                          <---------HSFC1(2)                                                                                          ------>ZmHOX2a(2)                                                                                          --------->HSFC1(2)                                                                                         <------ZmHOX2a(2)                                            <------NtERF2                               --------->AGP1                                           --------->LBD16                              --------->ARR11(3)                                           ------>NtERF2                                <---------GLK1(2)                                          --------->ANAC46                        --------->YAB1                                         <---------LBD16                          <---------ICU4                              <------ZmHOX2a(1)                        =========================HOX2a_HOX2a                           <---------HSFB2a(2)                         ==========================HOX2a_HOX2a    ------->TEIL           --------->HSFB2a(2)                         ------>ZmHOX2a(1)<---------ARR14(2) --------ANAC58            --------->HSFC1(1)                      <---------ARR14(2)   <---------ARR11(3) --------ANAC58            <---------HSFC1(1) <----------DOF2      --------->ARR14(2)   --------->ARR14(2) --------ANAC46      --------------->AGL15--------->LBD16 <---------TOE2(3)    --------->WOX13(1)  <-   tgcttgaacccatccagtgtctacttcttctaggactagagaccccggcatttgggaataaatgttgagtttcctccatgtccatcatcagatccttctg  24669700                           ------>ZmHOX2a(2)                          --------->CCA1(2)                          <------ZmHOX2a(2)                         <---------AGP1                         --------->ARR11(3)                         <---------ARR11(3)                         --------->AGP1                         <---------ARR14(2)                         --------->ARR14(2)                                                --------->ANAC58                        <---------CCA1(2)               --------->ANAC58                   --------->ANAC58                       ----------->ARR10                --------->ANAC58      <----------DOF2                ------->TEIL                        --------->CCA1(2)      --------->ARR11(3) ---------DOF2---------->DOF2                      <----------ID1          <---------ARR11(3)    ----   cctttgatacagacgatgaagctcgtagatctgagataacaagtattgtaagagagacaagaaatactgaaatgagacatcttttgaagacagacgcact  24669800                                                                      --------->YAB1                                                                     <---------ATHB12                                        --------->TOE2(2)           --------->ANAC58                                        --------->TOE2(3)--------->ARR14(2)                                --------->DAG2           <---------ARR14(2)                     <---------LBD16   ----------->RAV1(2)--------->GLK1(2)                <---------ANAC58        <---------------AGL15  ---------->DOF2           <---------GLK1(2)                 <---------ANAC58 ----->YAB1  <-----------------AGL2   -------->P ---------->DOF2    --------->ANAC58       <---------ANAC46   catagagtgactctaactagaattggggaatgaaaaagctaacctgagtttcaaagacagattcttggccaagcatggtctgtttcaatgtttccttgta  24669900                                                                --------->CCA1(2)                                                        --------->ZAT14                                                        <---------ZAT14                                                        --------->REM1(2)                                                     <---------ANAC58                    --------->ZAT14                  <---------ANAC46        --------->ANAC58                    <---------ZAT14                <---------ARR11(3)        --------->ANAC46                    <---------ZAT18                --------->ARR11(3)        --------->ANAC58             <------ZmHOX2a(2)               <---------ARR11(1)--------->ARR14(2)            <---------ARR11(3)             <---------SPL7      <---------ARR14(2)            --------->ARR11(3)            --------->RAP2.6(2) <------ZmHOX2a(1)      ------>ZmHOX2a(1)        ---------->DOF2              ---------->DOF2<-----------------------TaNAC69(2)       --------->AHL20(2)          <---------MYB52(1)<---------ANAC58 --------->ANAC46            ---   ctgtctcaaataaagatcacagtagactaatctattcgttaaggccgtatcaatatcgtgtacaggatacaaactccacaagctatcctcttgcatttcc  24670000                                                                --------------->AtSPL8                                                             ------------>CBF                                                      <---------ANAC55(2)                                                      <------MYB46(1)                                                      ----------->GT1                                                      <------MYB83                                                     --------->MYB111(1)                --------->MYB46(3)                   --------->MYB46(2)           --------->YAB1                            --------->MYB59 --------->ANAC58        <-------     --------->ANAC46    <---------DAG2            <<<<<<<<<MYB98   ------->TEIL   <------------CBF    ------->GAMYB        <----------DOF2           <---------MYB52(1)--------->ANAC58      <--------- ------>AtLEC2  <---------MYB52(2)      <------ZmHOX2a(1)   --------->ANAC46   --------->ANAC46     <   attcaacacacagtgataacaaacctcctttttttaagaacaggacagagtaagttaggtaaacacaatgtacccaaaaacaccgaattgatgcatcagg  24670100       --------->ARR11(3)                                                     --------->TOE1(2)       <---------ARR11(3)                                                     --------->TOE2(2) --------->ANAC58                                                           <---------ARR14(2) --------->ANAC58 ------>MYB83                       --------->YAB1 ---------->DOF2 ----RAV1(2)      ------>MYB46(1)                <-------TEIL   ---------->DOF2 --HVH21    ---------->DOF2 <-----------GT1  --------->ICU4 <----------ID1  ------->TEIL            - ---------LBD16   --------->MYB52(1)         <---------YAB1----------->GT1  --------->ARR14(2)  -----   gactcggaagaacttaaaccgaacagtttttaactgaaatttcagcgatgattcatcaaaatgggaaaaagaaagatgaatctgcgagagaagaaactta  24670200                                                      <---------ANAC58                                                      <---------ANAC46                                                  <------------CBF                                        --------->ARR11(3)                 --------->TOE1(2)      <---------ARR14(2)   <------ZmHOX2a(1)                    --------->ARR14(2)                                  <------ZmHOX2a(1) <---------TOE2(3)                      <---------GLK1(2)                                 <---------TOE2(3) -------->MYB52(1)                      <---------ARR11(3)                   --------->At4g35610  --- --->P         <-------TEIL          <---------TOE1(2)<---------ANAC58       <---------At4g35610 ----   cctaaggaagagaagagttcatacgaagaaacaaattccaaggattttctgagattgcgagtttatcgattatcgtctctgctcaagaagctaaggagat  24670300                                   ------>ZmHOX2a(2)                                  <------ZmHOX2a(2)                                 --------->AGP1                                 --------->ARR11(3)                                 --------->ARR14(2)                                 <---------ARR14(2)                                 <---------ARR11(3)                        <---------ZAT18                        --------->ZAT18                       <---------ANAC58                            --------->DAG2      <---------REM1(1)<---------ANAC55(2)           --------->ARR11(3)    <---------ANAC46   <---------ANAC58              <---------ARR11(3)   --------->ALFIN1    --------->ANAC55(2)           --------->ARR14(2)              <---------At4g35610  <---------ZAT14  <---------GLK1(1)      --------->YAB1          ---------->DOF2    --------->At4g35610 --------->ALFIN1  --------->CCA1(2)     <---------YAB1  <-----------HVH21       <---------REM1(1) ------>DAG2    --------->ANAC58 <---------AGP1      <---------ARR14(2)  <----------ID1 ------>DOF2    --------->ANAC58<---------GLK1(1)  ----------->ARR10  --------->ALFIN1   aaagtgtggtgaagcgataagaaatgcgtactcgagatctgttatcatggaagaagatttgtcagagagaaagtggagacaaaatgtagcagacaaacac  24670400                                                  <----------DOF2                                              <---------ZAT18                                              <---------ZAT14                                              --------->ZAT14                                            --------------->AtSPL8             ----------->GT1         <---------ANAC58     ------>ZmHOX2a(1)                <-------GAMYB           ---------->DOF2           <---------ANAC58  ------>ZmHOX2a(1)             <----------DOF2   --------->ALFIN1              <----------DOF2------->TEIL                     <----------DOF2   ttgaagtggaagcgaaagtaaaatagaagttgagactttccgtcttactgtactttcctccttcgtcttctgtgtctctctgtctttctttttcgttgaa  24670500  Previous    Next  AGI:  At5g61300.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G07790.1); similar to hypothetical protein OsI_037595 [Oryza sativa (indica cultivar-group)] (GB:EAY83636.1); similar to Os12g0577800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067117.1) Range:  from: 24667930    to: 24670002    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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