Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                <---------ARR14(2)                                                              --------->ARR14(2)                                                             <---------CCA1(2)                                    <---------AHL20(2)     --------->YAB1                                    --------->AHL20(2)    <---------YAB1                                --------->ICU4           <---------ARR11(3)         <---------YAB1       --------->YAB1 --------->AHL20(2)                       <-----------GT1 -------REM1(1)              --------->AHL20(2)   --------->MYB59     --------->ARR11(3) ------RAV1(1)      ----------->GT1--------->AHL20(2)  --------->ICU4 <---------ARR11(3) <---------CCA1(2)   ttgtagtcgttatcaatgtaaccggtaacaaataaaaattaatgagataaattaggcatgatcatatccatagatattgtcaaacaattttctatcttca  24640100                                                                                           <---------                                                         <----------DOF2           -------->P                               <----------DOF2---------->DOF2  <---------AtLEC2 <---------MYB52(2)   agtagtttttggttttgggcgaaaatatgttctctttgacaaattcaacaaagaccattctttttggatgacaaaattgacaacttacccattctttttg  24640200                         <---------ICU4         <---------AHL20(2)              --------->At4g35610 -DOF2   --------->AHL20(2)        ---------->DOF2----------->GT1        <----------DOF2            -   ggctcatacaatttatcaactaaaccatcagtacaaaaaaagaagcagaaattagaaaaatataagaaaatgactctttctctgtaagaaaaaatccaac  24640300                                            ------>ZmHOX2a(2)                                           --------->CCA1(2)                                           <------ZmHOX2a(2)                                          <---------AGP1                                   --------->YAB1                         ------>ZmHOX2a(1)--------->ARR11(3)                         =========================HOX2a_HOX2a                 <---------DAG2                    --------->ANAC55(2)   --------->AGP1                      <----------DOF2            --------->ANAC46       --------->AHL20(2)                      <-----------GT1<---------HSFB2a(2)       <---------AHL20(2)==========================HOX2a_HOX2a          ----------->GT1   --------->HSFB2a(2)      --------->YAB1<---------ANAC58      <---------ARR11(3)       ---------->DOF2   <----------DOF2     <---------YAB1 <---------ANAC55(2)  --------->RVE1(1)     <---------MYB52(1)    <---------DAG2 -------->TOE2(3)   <---------ANAC58  ---------->DOF2         --------->TOE2(3)   <-----------GT1   -   tacgtttattatatccacaattacgtcctatatacaattaaaaagatctaaattgctctattttcgttagaaagtagttactttttacttttttagaagt  24640400                                                                                 ------->MYC3                                                                                 ------->MYC2                                                                                 <-------MYC2                                                                                 <-------MYC3                                                                              <---------ALFIN1                                                                             ------>ZmHOX2a(2)                                                                        <---------WOX13(1)                                                                      <---------AHL20(2)                                                                      --------->ATHB12            ---------->DOF2                                          <---------AHL20(2)    ----------->GT1                                                  --------->AHL20(2)   --------->HSFC1(1)       <-----------GT1                  <---------AHL20(2) --------->ANAC46   --------->HSFB2a(2)     ----------->HVH21         --------->ARR11(3)<------------CBF            --   <---------HSFB2a(2) <---------AHL20(2)       <---------AHL20(2)<---------AHL20(2)       ----------  ------>ZmHOX2a(2)<---------AHL20(2)          --------->AHL20(2)--------->AHL20(2)       <---------- -------->ARR11(3) --------->AHL20(2)          <---------AHL20(2)<---------AHL20(2)   <----------DOF2   ttgatctagaaaaaaaaagaattatatatatgaccgttttagatttgaattaaatgattttgttttatttattaattgatccacgttcctttctacaatt  24640500                                                                                               ------                                                                                               ------                     --------->AHL20(2)        --------->ARR11(3)                            <-------         <-----------GT1                       <---------ARR11(3)                          <---------ARR14(2) -------->ID1        <---------AHL20(2)    ---------->DOF2                                 --------->ARR14(2) -->CBF <-----------GT1  *TSS           --------->ANAC58            <---------GLK1(2)     --------->ATERF1(1) -GT1   <---------AHL20(2)              --------->ANAC58--------------->AtSPL8<---------MYB46(3)   tgttttttttttaatctccttgataaattttcgtcaacacatacccaaagacctccttgttgtactctcaaattcttgggtcgttctgagtcgtctccgc  24640600                                                                ------>ZmHOX2a(1)                ----  <---------ARR11(3)                                         ------>ZmHOX2a(1)                ------>MYB46(1)  --------->ARR11(3)------>ZmHOX2a(2) <<<<<<<<<TBF1     <------MYB46(1)                       ------>MYB83 >NtERF2    <---------DAG2         <<<<<<<<<TBF1        <------MYB83                        <-------- --->LBD16  <----------DOF2   <----------DOF2      --------->ATHB12 ------>ZmHOX2a(1)     ------->TEIL --LBD16---------->ID1------>ZmHOX2a(1)  <<<<<<<<<TBF1 --------->MYB59                --------->YAB1   gttaaatcttttccctttttgatcctttcttcctttcttcttcttcttcgcattgatttggtcctccttcctcttctattctattcattaagaacctaat  24640700                                  --------->ZAT14                                --------->ANAC46       --------->ARR14(2)                             <---------ZAT14           <---------ARR14(2)                       --------->ANAC55(2)             --------->GLK1(2)                       --------->ANAC58            ------->GAMYB                       --------->ANAC46            --------->TOE2(3)                       --------->ANAC58      --------->ANAC46                      <---------LBD16       --------->LBD16--------->At4g35610   <---------GLK1(2) ----->YAB1         <---------REM1(2)      <-----------RAV1(2)   <---------CCA1(2) -MYB59          <<<<<<<<<TBF1<---------ALFIN1    --------->MYB46(3) <----------DOF2         <-------   cttcatcttctccatcttcttcttcacggactccacttcgctcatccaggtaaccacaatctgctctctatcttttgcttcaaaattctcagttcctttc  24640800                      ------>ZmHOX2a(1)                      --------->LBD16                     --------->TOE1(2)                    ----------->RAV1(2)                    ------>ZmHOX2a(2)                    =================================HOX2a_HOX2a                   ==================================HOX2a_HOX2a                   <------ZmHOX2a(2)                  <---------GLK1(2)                  --------->ARR14(2)                  --------->ARR11(3)                  <---------ARR11(3)          ------>ZmHOX2a(1)                                 -----                  --------->AGP1          --------->ARR14(2)                         --------->AHL20(2)                  <---------ARR14(2)    <---------ANAC58            --------->LBD16  --------->ICU4             --------->At4g35610        <---------ANAC58           <---------HSFB2a(2)          <----          <---------MYB52(1)           --------------->AtSPL3      --------->HSFB2a(2)<---------ICU4<        <---------ANAC58               --------------->AtSPL8 <---------ANAC58       <---------AHL20(2) ---DOF2<---------ANAC58   <----------DOF2<---------MYB52(1)  <---------ANAC58       <---------ATHB51   ttctcaatttccgtctgctagatcctgggctttcgatttgttccgttcctcttctgcgattgtttcgttccagagagaattatcgaaataattaagcgaa  24640900             --------->YAB1            <---------YAB1                         --------->YAB1      <---------AtMYB61                           <---------ATHB51    --------->ALFIN1                      --------->ARR14(2)                --------->ATHB12  <---------ANAC46                 --------->At4g35610           <------MYB83 <---------WOX13(1)  <---------ANAC58                --------->ANAC46<---------ATHB12     <---------YAB1  <---------ANAC58                --------->RAP2.6(2)            <------MYB46(1) ---->ARR14(2)                  <---------At4g35610<---------ICU4----------->GT1 -----ARR14(2)              <----------DOF2  --------->ANAC46   --------->MYB59                <----- ---------ANAC46      <---------TOE1(2)   <---------ARR14(2)    <---------TOE2(3)              <-----   ttttgtgtgtggttttcatagtcttgggttctttagccgctacatatactcaattatgcccaaaattaggtttaaaattgattaactaaaacttatactt  24641000  Previous    Next  AGI:  At5g61210.1    Description:  SNAP33 (synaptosomal-associated protein 33); SNAP receptor. Identical to SNAP25 homologous protein SNAP33 (SNAP33) [Arabidopsis Thaliana] (GB:Q9S7P9); similar to SNAP30 (synaptosomal-associated protein 30) [Arabidopsis thaliana] (TAIR:AT1G13890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64486.1); contains InterPro domain Target SNARE coiled-coil region (InterPro:IPR000727); contains InterPro domain SNAP-25 (InterPro:IPR000928) Range:  from: 24640525    to: 24642857    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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