Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <---------ANAC58             <---------ANAC46                                                     <---------ANAC58       <---------AHL20(2)      -                                                     <---------ANAC46      <---------AHL20(2)       - --------YAB1                                 <---------At4g35610      <----------DOF2     <---------LBD16 ---DOF2           <---------ATHB12           --------->At4g35610<---------MYB52(1)    --------->ATHB12   tcttatagtctctggtcgctaatgactcgtattcttggtccagttttcagctcttgtgtgtaaatttgttagtcttttttaatgtcgagtaattggggaa  24637700                <---------HSFB2a(2)                --------->HSFB2a(2)                                          <---------MYB46(3)    <-            <---------ZAT2                                        <----------DOF2    <---------ARR11(3) <---------ANAC58                                               ------->TEIL <------MYB83          -- <---------ANAC58                                       <---------At4g35610  <------MYB46(1)       -- -------->At4g35610         <---------HSFB2a(2)         --------->At4g35610<---------WOX13(1)      -- -------->ZAT2 <---------LBD16                      <---------MYB46(3)    <---------GLK1(2)   -------   gtagctcgcgagatagctcgggaagtagttcaagaagcgatgttgacaactcgtttgatgctgacgaacttttacagattggttcaagatgtatggaggt  24637800                                                                      <---------TOE1(2)                                                                   ------>ZmHOX2a(2)       <-----------GT1 <----------DOF2                           --------->ARR11(3) --------ARR14(2)      ------>ZmHOX2a(1)                         <---------ARR11(3)           <------ ------->GLK1(2)      --------->TOE2(3)                        <---------YAB1                <------- ----->TEIL        <---------ARR11(3)                      <---------DAG2             <---------REM1(1) ------->ARR14(2) <---------CCA1(2)           <-------TEIL <----------DOF2        <---------YAB1 ---->GT1 <----------DOF2           <---------WOX13(1)   ---------->ID1     <---------YAB1<---------At4g35610   gaatctgtttttctttctctatatcctttgtctcagagattgatgaagttcatatttttggctttatgatctcatgttttcattgtaattgtagctacgg  24637900                                   --------->ALFIN1                    <-----------ARR10                            <---------ANAC58        <---------GLK1(1)  ----------->HVH21                     <---------ANAC58                 <--  ---------->DOF2   --------->GLK1(2)                       ------>ZmHOX2a(1) ----------->GT1     <-- ---ANAC46         <---------GLK1(2)                 <---------KAN4(2)    --------->ZAT6<---------WOX13(1) --LBD16--------->GLK1(1) <-----------HVH21  <-----------HVH21   <---------ANAC46     --------->ATHB12   agagaaaaggagatgcttagagaatctcagtcacagagtgttgaacttgtcagagtatgttcctcttgtgtgttttagactagtgaattgattgttcaaa  24638000                                          <------MYB83                   <---------ANAC46                                          <------MYB46(1)           <---------GLK1(2)               -                                        <--------P             <-----------HVH21                   <- -------DAG2      <----------DOF2 <---------STY1(1)     --------->ARR14(2)                    <------ --------DOF2---------->ID1  <-----------GT1            <---------ARR14(2)          --------->CCA1(2)   ctttttctgagatttgttgtcttttttttttttaccctagaggttggaactgaatgcgaattcgttgtcagagtctcgtttagaagataagagaagaatt  24638100                                       <------MYB83                                     <---------WOX13(1)          *TSS                   <------ZmHOX2a(1)  --------->GLK1(2) <-----------RAV1(1)          <---------HSFB2a(2)  <---------GLK1(2)                       --------->At4g35610 -------->ARR11(3)            <-----------RAV1(2)  --------->ARR14(2)              <---------AHL20(2) --------At4g35610            --------->HSFB2a(2)----------->ARR10 --------->GLK1(1)       ---------- ---GLK1(1)                 -------->P <------MYB46(1)       ------->TEIL      <---------AHL20(2)   cagatgttggagaaagaattgttgaattgctaccaggagattggtaatggagagattctcatgaaactgaaatctaggcatatattttatatgagctaaa  24638200                                   --------->ANAC58                                   --------->ANAC58                                   <---------ANAC55(2)                                =============================HOX2a_HOX2a                                <------ZmHOX2a(2)             --------->MYB46(3)                           <---------LBD16            <------ZmHOX2a(1)                           <---------ANAC58         --------->LBD16                  --------->ARR11(3)                           <---------ANAC58        <-----------RAV1(2)               <---------ARR11(3)             <----------DOF2--------->LBD16     --------->ANAC58                ------->TEIL           ---------->ID1  <---------ANAC46     --------->ANAC58        --------->ZAT18   <----------DOF2 <---------GLK1(2)          <---------At4g35610       <---------ZAT14 ->GT1 <----------DOF2    <---------LBD16     --------->At4g35610       <---------ZAT18------>ZmHOX2a(2)   aaacactttctttgtctttcagattatttgcgggatcaagtaaacttcagaagccaggaaatgaacgacctgagtgaacatgtactcgatcttgaagtca  24638300                                                                                        --------->ANAC58                                                                                        --------->ANAC58                                                                                 <-----------RAV1(1)                                                                                 <---------MYB46(3)                                   <---------------AGL15                      <-----------RAV1(1)                        >>>>>>>>>TBF1                                    <---------At4g35610       --           --------->LBD16         --------------->AGL15                 --------->At4g35610       --    ================================================MADS_MADS         --------->At4g35610 --------->ARR14(2)    <---------------AGL15         <-----------------AGL3       <---------GLK1(1) <---------REM1(1) <-    --------------->AGL15       <-----------GT1<------ZmHOX2a(1)      <---------At4g35610 <---------ARR14(2)   gagtaactaaatcagggaaattggaagaagaagttaactatttgagggaggagttgtgttcgtcgaaatctgagcagctattgttgttgcaagaactgga  24638400                                                      <------MYB46(1)            --------->At4g35610           --------->ZAT2        ------>ZmHOX2a(1)            <---------At4g35610           --------->At4g35610  --------->TOE1(3)     <---------GLK1(2)            <-------GAMYB  <------ZmHOX2a(1) ------->ZAT14                   <-----------RAV1(1)  <------MYB83 <---------YAB1 ------->ZAT18          <----------DOF2  --------->GLK1(2)     --------->TOE2(3)                ----- --------ZAT14        <XXXXXXXXXXXXXXXXXXXXMIR157A-C  <---------DEAR3(2)                    ---------   gagcacagaaactgagctacagttttctttgttttctgttgagaagctggaggagtcggtctcatccttaacattggagtctcagtgtgagatagaaagc  24638500                               <----------DOF2                           --------->ATERF1(1)                        --------->ATERF1(1)                        <-----------RAV1(2)                       --------->ZAT2                       <---------ZAT2                       --------->At4g35610                       <---------At4g35610                          --------->ANAC58                   --------->ALFIN1                                 --------->ANAC46                <---------ANAC46                                    --------->ANAC58    --------------->AGL15 <---------ATERF1(1)               --------->ANAC58 ---->YAB1      <---------ANAC58                            --------->ANAC58 ->DOF2         <---------ANAC58 <----------DOF2          ---------->DOF2                     -------   ataaaacttgatatagtagcgttggagcaggcgctctttgatgctcagaaatttcaaggtgaaagcatccaagaaaacgataagttaagagaaatagtca  24638600  Previous    Next  AGI:  At5g61200.1    Description:  similar to myosin heavy chain-related [Arabidopsis thaliana] (TAIR:AT5G07890.3); similar to myosin heavy chain-related [Arabidopsis thaliana] (TAIR:AT5G07890.2); similar to myosin heavy chain-related [Arabidopsis thaliana] (TAIR:AT5G07890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64487.1) Range:  from: 24638110    to: 24639487    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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