Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              --------->WRKY38(1)                                          --------->MYB59          <----------DOF2                                         <---------ANAC46 ---------AHL20(2)                                           <---------ICU4     <-----------GT1 -----AHL20(2)               <---------------AGL15        --------->YAB1 <---------TOE2(3) ----AHL20(1)            <----------DOF2         --------->YAB1   <---------ANAC58       <---------At4g35610 --->AHL20(1)       <----------DOF2             <---------YAB1    <---------ANAC58    ---------->DOF2 ---CCA1(2) --------->WRKY12 --------------->AGL15       <---------YAB1  <---------TOE1(3)    ------>ZmHOX2a(1)   atttgatttcatctttgacctcctttcctttctatttcatgaaattagttatcaaaattttgataatggcttgtttaggtttttacatttaagctcctcg  24629700                                                                                    <---------TOE2(2)                                                                               --------->MYB52(1)  --                                                  ------->TEIL           <---------ANAC58      ------                ----------->GT1                   <---------TOE1(3)      <---------ANAC46     -------            ---------->DOF2                      <---------DOF5.7(2)     <---------ANAC58 --------->ICU4 <<<<<<<<<TBF1  --------->ALFIN1     <---------ATHB12                  --------->ARR11(3) --------->MYB46(3)   ttcttcttcaaaatcaaagtgtagaaacagagattaccaataactaattgtgaacgtttcaaagtttttaaaatttcttgtaaacggaggtaaccattaa  24629800                                                                                <---------AHL20(2)                                                                     --------->ARR14(2)                                                                     <---------ARR14(2)                                                                  <---------ANAC58                                                                  <---------ANAC58                                                                  --------->ANAC55(2)                                                     --------->GLK1(2)    ------------>CBF                         --------->ICU4     --------->ARR11(3)    <---------ANAC55(1)                <---------AHL20(2)          <---------ARR11(3)    <---------ANAC55(2)           --------->AHL20(2)               <---------ARR14(3)    <---------ANAC46              <---- ------->MYB52(1)   ----------->GT1         --------->GLK1(2)  <---------MYB52(1)              ------ --->AHL20(2) <---------YAB1                --------->ARR14(3)<-----------HVH21 --------->AHL20(2) -->AHL20(2)--------->YAB1              --------->YAB1    ------------>MYB.PH3(1)    --------->YAB1   aaaacgaattacatttattattttgtaatattcaaaacaaaatcaaaatcttgagaatcgaaaccgttacgtatactacaatttatatgatcacatttta  24629900                                                       <---------ANAC58                                                       <---------ANAC58                    --------->AHL20(2)                                           <---------ZAT18                               <----------DOF2                                           --------->ZAT18                               ============                                           <---------ZAT14               --------->HSFB2a(2)---------                                         --------->ANAC46          --------->MYB52(2)   <---------DAG2       <------------CBF               --------->ARR14(2)         <---------MYB52(1)--------->WRKY12 -----AHL20(2)                        <---------ARR14(2) --------->ALFIN1<---------HSFB2a(2)<-------- --->AHL20(2)         <---------------AGL15--------->ZAT14      <-------GAMYB      --------->WRKY38(1)   aatttcgaaaattgagggacatttcaaattcaagaaaacatatactccactaatttagggtgtctccgttagtttctaaaactcgttgccccttttaatt  24630000                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                              <------                                                                                              ------>NtERF2                                                                                              <------                                                                                              <<<<<<<                                                                                              <<<<<<<                                                                                              <<<<<<<                                                                                              <<<<<<<                                                                                              <------                       ------------>CBF                                                       <<<<<<<             --------->O2                                                                     <------             --------->TGA1a                                                                 <-------             --------->ANAC58                                                                <-------        --------->At4g35610                                                                  <-------     ---------->DOF2  --------->ANAC46                <---------GLK1(2)                      <-------     ==================bZIP_DOF             ------>MYB83                                     <------- ======================bZIP_DOF             ------>MYB46(1)                                 --------- >AHL20(2)   --------->ANAC46         ----------->HVH21                          <----------DOF2  <-- -AHL20(2)   --------->ANAC58       ----------->RAV1(2)              <---------ZAT14    <---------ICU4   ccagttcaaaagctcacgcctcatacacaatctctaaaccctgacctcccatttcagtttctctgtttgagaacacttgatttcttttaaaaatggcggc  24630100       <---------------AtSPL3    --------->At4g35610 -NtERF2 --->At4g35610 --->ATERF1(1) ---ERF1 <---------SPL7 ---RAP2.3(1) <<AtERF-2 <<AtERF-5 <<AtERF-1                           <---------ANAC58 <<AtERF-4                --------->ATHB12 ---ATERF1(1)   <---------At4g35610  <---------ANAC58 <<AtERF-3  --------->ANAC58      <<<<<<<<<MYB2 ---MYB46(3)--------->ANAC58     <XXXXXXXXXXXXXXXXXXXMIR775 --RAP2.6(2)<---------ANAC55(2) <---------ANAC46 --RAP2.3(3)--------->ANAC46    <---------ANAC58 --ANAC46--------->ZAT14 <---------ATHB12 --RAP2.3(2)--------->ANAC55(2) <---------ANAC58                                        <---------ICU4 --DEAR3(1)--------->ZAT18-------->ATHB1                  <---------GLK1(2)         <-----------GT1 >RAP2.6(3)<---------ZAT18<---------ICU4         <---------ARR14(2)              <---------ICU4 -------ZAT14  --------->MYB52(1)<-------GAMYB   --------->ARR14(2)             --------->ICU4  <----   tacagtagcagagtacgcaactgctaaatcattggcgttgctggacacagagaaccgcgaggttctcaatagttttgatgccatttttactcatggcaac  24630200                                                                                      --------->MYB52(1)                                                                                  ------->GAMYB                                                                                 ----------------->AGL2                                                                                -------->P                                                                               --------->WOX13(1)                                                                              --------->MYB46(3)                                          <----------DOF2                 --------->MYB46(3)                                      --------->MYB46(3)                 --------->ANAC58   <--------  <------ZmHOX2a(2)    ------->TEIL  <---------At5g28300          ---------->DOF2--------->MYB46(3)  ===================HOX2a_HOX2a    <-----------GT1            ------>NtERF2 <---------ATHB12 -----ALFIN1  ------>ZmHOX2a(1)  <----------DOF2    <-----------HVH21    --------->ANAC58  ------->TEIL   accgatcaagtcgctcctcttgatgagcctctggtctttaaccgctttggactcagtcacatctcggccaaagacacccatcaaccaaaaacggacgtag  24630300                                               <---------PCF2                                              ----------->HVH21                                          <------MYB46(1)                                          <---------ANAC58                                          <------MYB83                                          <---------ANAC46                                          <---------ANAC58                                         --------->MYB46(2)                                         --------->MYB111(1)                                         --------->MYB111(2)                                         <---------AtMYB61                --------->GLK1(1)        <---------MYB46(3)                <---------GLK1(1)        --------->MYB55(2)               <---------ARR14(2)      <---------MYB52(1)               --------->ARR14(2) <-----------TGA1                                           <-------     --------->At4g35610          <-----------HVH21                            ----------->HVH21 ------->TEIL <------NtERF2       --------->TOE2(3)                          <---------MYB46(3) <---- -ANAC46 <---------DEAR3(1)      --------->ANAC46                 <---------ARR14(2)        <-------GAMYB   atgaatcagcgaaggcggatttcgctggtgcaaaaacgtcagtttggtgggacattgagaactgcgaggttccaaagggttgtgaccctcatggggttgc  24630400                                          --------->At4g35610                         ----------->GT1  <---------At4g35610                                     <--                        --------->DAG2    <------NtERF2                                         -----                       ---------->DOF2  <---------ZAT18                                         -----                    <---------ETT(2)   --------->PCF5                                   <---------ZAT14 -P       <------ZmHOX2a(2)           <---------SPL7                                    --------->ZAT14 -----ANAC46   --------->ZAT14    <-----------RAV1(1)        --------->YAB1          ------>ZmHOX2a(1)   tcagagcattagatcagttctgtcgaaaagtaacttctgtggtccgctcactatttatgcctatggtgacacaaatcaaatcccttcctctgtacaacaa  24630500                             <---------bZIP60(1)                             --------->ANAC46                             ===================MYC_MYB                             --------->ANAC55(2)                             <---------ANAC55(2)                             --------->bZIP60(1)                             --------->O2                             <---------TGA1a                          <---------ATHB12                  <---------CCA1(2)                 ------->TEIL--------->TGA1a                 <---------ARR14(2)                 --------->ARR14(2)     <-------GAMYB                 <---------ARR11(1)    --------->LBD16                <---------CCA1(2)      ----------->GT1                                     <---------AHL20(1)              <---------ANAC58        --------->ATERF1(2)                                  --------->ARR11(3)              <---------ANAC58        <---------ANAC46                                     --------->AHL20(1)           --------->DEAR3(1)--------->ANAC58                                            ------->TEIL           --------->DREB2C(2)      ------>NtERF2                               ---------->DOF2          --------->DEAR3(2) <---------O2                                      <---------AHL20(2)        <---------ALFIN1--------->WOX13(1)                                 --------->AHL20(2) -------ARR11(3)<---------ARR14(1) ----------->HVH21             --------->ATHB12     <---------YAB1 ---->ANAC58  <---------ANAC46<-----------HVH21               ----------->RAV1(2)<---------TOE2(3) ---->ANAC58--------->LBD16  --------->ANAC58               <---------ALFIN1   --------->AHL20(2)   gctctctcttccaccggcgtatctctcaatcacgtccctgccggttaatctctcttcttgaaacacctgattagctataaattaaagtatgaatattttg  24630600  Previous    Next  AGI:  At5g61170.1    Description:  40S ribosomal protein S19 (RPS19C). Identical to 40S ribosomal protein S19-3 (RPS19C) [Arabidopsis Thaliana] (GB:Q9FNP8); similar to 40S ribosomal protein S19 (RPS19B) [Arabidopsis thaliana] (TAIR:AT5G15520.1); similar to 40S ribosomal protein S19 (RPS19A) [Arabidopsis thaliana] (TAIR:AT3G02080.1); similar to unknown [Populus trichocarpa] (GB:ABK95517.1); contains InterPro domain Ribosomal protein S19e; (InterPro:IPR001266) Range:  from: 24628312    to: 24629653    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g61180.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G62200.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40196.1); contains InterPro domain Protein of unknown function DUF537 (InterPro:IPR007491) Range:  from: 24630093    to: 24631400    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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