Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             <---------ANAC55(2)           --------->ANAC55(2)          --------->ANAC58           <---------ANAC58             --------->ANAC58           <---------ANAC55(1)        ---------->DOF2           <---------ANAC58     --------->ZAT14           <---------ANAC46     <---------ZAT18       <---------ANAC58   <---------ARR11(3)           ---------->DOF2       <---------ANAC58   <-----------ARR10       <---------ICU4 --------ANAC58           --------->ARR11(3)--------->ANAC58                <---------ANAC46 --------ANAC58          <---------CCA1(2)  --------->ANAC58 --------->ATHB12--------->LBD16 --------ANAC46 <---------At4g35610 ------->MYC3  --------->YAB1           <---------LBD16 -----RAV1(1)   --------->At4g35610 <-------MYC3 --------->ICU4       <---------ALFIN1 ---ZAT6  <---------TOE1(2)     <---------ZAT14  <---------YAB1    --------->bZIP60(1)           <<<<   tgcttaatttcttacgtatgctccctagtatctctgcacatgaagcaagtcatcatcaaaagctcattggcatcacttccgcatacttcacaaggcttct  24597200                                 ----------->GT1                               <------ZmHOX2a(2)                              --------->ARR11(3)                           --------->AHL20(2)                              <---------ARR11(3)                          --------->AHL20(2)     <---                    --------->YAB1      ---------->DOF2              <---------ARR11(3)---------->DOF2 <<<<<TBF1--------->ANAC46---------->DOF2                      --------->YAB1  ---------->DOF2   ----   tcttctatatatacacatcgaagcatattaaagatcagtataaaaagaaattcgcatcttgctaatcacaagaccattaaaaaaagcctaaaagaacatt  24597300                                                                                                    <          ----------->GT1             ---------->DOF2                                           -----        ---------->DOF2           --------->TOE1(3)                                        --------->ANAC58   --------->AHL20(2)             --------->TOE2(3)       <---------YAB1      <-------TEIL --------->ANAC58 ------AHL20(2)             --------->ANAC58       --------->AHL20(2)        --------->CCA1(2)------- ----->AHL20(2)             --------->ANAC58     --------->TOE2(3)        --------->ICU4   <---------ANAC55(2)   taaaaaaaaataaagaaaaactcaaaaatcaagaaaccctaaaagaacacacattaatttctgattacaaagagtcaagattcaagaaaaatcaagtaaa  24597400        <-----------GT1                                                            ---------->DOF2     <---------ICU4                                                           --------->ARR14(2)    --------->ICU4                                          <-----------GT1   <---------ARR14(2) -------TEIL                                 --------->ANAC58                 --------->GLK1(2) ---->ICU4                                   --------->ANAC58                <---------GLK1(2) --->DOF2   --------->YAB1    <---------CCA1(2)   ----------->ARR10  <-----------GT1   ----------->GT1   gatgcaatttttactcatgaaatcgaaaacccatatcaataaactgcaagcgaagatgtgatttaccagttttacaagagaatctgaaaggcttaaatct  24597500                      <-----------RAV1(2)            --------->GLK1(1)                                       <-------TEIL           <---------GLK1(2)            <---------ANAC58           --------->ARR14(2)           <---------ARR14(2)           <---------ANAC46        --------->DAG2           --------->ARR14(2)           <---------ANAC58    --------->YAB1        --------->ETT(1)          <---------ALFIN1         <---------ATHB12                      <---        <---------ANAC46  <---------ANAC58               --------->WOX13(1)                  ------>MYB46(1)     <-----------RAV1(1)  <---------ANAC58             <---------YAB1           <------NtERF2------>MYB83     =============================RAV<----------DOF2   ------------>CBF------------>CBF    <---------MYB59   gaactaaatgtcggattttctggtccaggcttgttcccactttcgtagaccattgttatcaatcaaaaggttcttcaatggcatcgactgtaaccaaatt  24597600                                                                                        --------->ARR14(2)                                                                                        <---------ARR14(2)                                                                                     ------------>CBF    <----------DOF2                                                            --------->ZAT6      <-   ------>ZmHOX2a(2)                                                         <-----------GT1    <---- --------->ARR11(3)                                                     <---------YAB1<---------ALFIN1 <---------ARR11(3)                                                 ------->TEIL --------->ANAC46---- --------GT1            --------->GLK1(2)          <---------HSFB2a(2)  <---------AHL20(2)  ---------   ttcgatcttttttcttgaaatcgaagaatcagttttttttttggtcttgtgttcttgaagagccaagacgaatttttattaacactccccaatccccaat  24597700                                 --------->ANAC46                                 --------->ANAC58                                 --------->ANAC58                          <-----------GT1 <---------GLK1(2)       --------->AHL20(2)                                                      ---- --------YAB1         <----------DOF2                              <------------CBF           ------- -----ATHB12        ---------->ID1                            --------->AHL20(2)          <---------- ----->YAB1        <-----------GT1                            <---------AHL20(2)        --------->AHL20(2) --->CBF   <------------CBF    --------->CCA1(2)   <---------GLK1(2)         <-----------GT1---------   cttgattcttgaatattgatttttctttttaatatacgaaatcgaatttttcaaattctcttatttaaatattgggaattaacttcacgtttatttataa  24597800                                                --------->TGA1a                                          <---------ARR14(2)                                          --------->ARR14(2)                                         --------->KAN4(1)                                        ---------->TaMYB80                                        <---------KAN4(2)                                   ---------                                 ------>ZmHOX2a(2)                                          <--------                                <------ZmHOX2a(2)                                           <--------                               --------->ARR11(3)------->MYC3                               ---------                               --------->AGP1   --------->O2                                <-------- ------>DOF2                   <---------ARR11(3)<-------MYC3                               --------- ---->TBP                     --------->GLK1(1) <---------TGA1a                            <---------GLK1(2) -TBP<----------DOF2        ------>NtERF2--------->GLK1(1)                              --------->YAB1 >YAB1                     --------->DEAR3(1)   <---------O2  <-----------GT1 --------->TOE2(3)<-----   aaagaagctttagcaaaatttgtttatcgccgagatctatggaatatccaacgtggcattttgttaaccatgtattgttttcttaaacattgagaatctt  24597900      <-----------GT1 >ARR11(3)                                                                --------->AHL20(2)    ----- ---ARR10                                                                 <---------AHL20(2)   ------ -ARR11(3)                                       <-------TEIL             <---------AHL20(1)  ------- >GLK1(2)                              --------->AHL20(2)  --------->ANAC58                   ------- -ARR14(2)                          --------->AHL20(2)--------->ANAC46    --------->AHL20(1)<-------- >ARR14(2)              <---------YAB1 <---------AHL20(2)  --------->ANAC58<---------AHL20(2) ------- -----DOF2         --------->ANAC46 --------->YAB1  <---------O2 ----------->GT1        <-----------HVH21   tttttttttttcaaaacaaacacactattagtatctaataaaaaaatgagattcacatggcacaaaattgagaaaatttatttcaaaaactgtcacacgg  24598000                           <---------At5g28300                       <---------ICU4                                                 ----------->GT1       --------->MYB52(1) <-----------GT1                                      <---------------AGL15 ---->At5g28300 --------->ANAC58                                               --------------->AGL15 ----->GT1      --------->ANAC58                                              <-----------------AGL3 -->ANAC46   --------->ZAT14                        --------->TOE2(3)     --------->GLK1(1) -->ANAC58   <---------ZAT18                     <---------ARR14(2)      --------->ARR14(2)         - -ALFIN1     --------->ZAT18  <---------ZAT2     --------->ARR14(2)      <---------ARR14(2)         < -->ANAC58   <---------ZAT14  --------->ZAT2    <---------CCA1(2) ---------->DOF2<---------DAG2   ---   taaaaaaaaaaacagagcactcccctaattacagcttggaaatagcatccatatccataaactgtctccaaagcatatatccaatttttggtaacaacaa  24598100  Previous    Next  AGI:  At5g61100.1    Description:  zinc ion binding. similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G61110.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63105.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62131.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011) Range:  from: 24596396    to: 24597553    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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