Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                --------->CCA1(2)                                                                              <-----------GT1                                                                             <---------ARR14(2)                                                                             --------->ARR14(2)                                                                      <-------GAMYB                                                                     <---------DEAR3(1)                                                                     <---------ANAC46                                                                    --------->ATERF1(1)                                                                    <------NtERF2                                                                   <---------DEAR4(2)                                                                   <---------ERF1                                                                   <---------ORA47(2)                                                                   <---------RAP2.3(1)                                                                   ------>NtERF2                                                                   <---------RRTF1(1)                                                                   <---------ATERF1(1)                                                  ----------->GT1 <---------RAP2.3(2)               -                                              ---------->DOF2     --------->DEAR3(1)     <-------TEIL                                          <---------ARR14(2)      <---------DEAR3(1)     --------->SPL7              <<<<<<<<<TBF1             --------->LBD16           <---------RAP2.3(3)  <---------SPL7      <---------CCA1(2)                --------->HSFB2a(2)       <---------LBD16--------->ANAC46  <-- --------->ANAC58                     <---------LBD16            --------->ATERF1(1) <---------------AtSPL3 --------->ANAC58          --------->AGP1 --------->ARR14(2)     <---------ABI4(1)   <---------------AtSPL8   gttaagccatctcttcttcttcaacatcagaactacattttccggattcaaagtgtttatttcaatcggcggcgttgaatatacgagatggtacgttgtc  24559300                                                                          ----------->GT1                                                                        <---------WOX13(1)                                                                      <---------ICU4                                                                      -------->HAHB4                                                                      <--------ATHB1                                                                      --------->ATHB12              <                                                                      --------->ATHB51              <                                            <---------AHL20(2)       <---------AHL20(2)             -                                           --------->AHL20(1)        --------->ICU4                <-                                           <---------AHL20(1)        <---------ATHB51        --------                                           --------->AHL20(2)      --------->YAB1 <---------ICU4   --                                         ------->TEIL          ----------->GT1    --------->YAB1 <--- -------->LBD16       <-----------GT1 --------->ICU4           <------ZmHOX2a(1) --------->ICU4------ -------LBD16  <----------DOF2     <------ZmHOX2a(1)<---------ATHB12 <---------YAB1          <-------   tccggatgtaagagagccttttttaaacgagttaagaggaatgaatataatcaaatcaaactgaaggattaataattggttaaattatgagctattccgg  24559400                                                                <---------ZAT6                                                    --------->YAB1                                                    -------->ATHB1                                                    <---------ICU4 ------MYB83                                       <---------ATHB51   <---------WOX13(1) ------MYB46(1)                                    <---------ATHB12  <---------ANAC58 ---------->GT1                         --------->AHL20(2)      <-----------RAV1(1) --------AtMYB61                     --------->WOX13(1)       <---------At5g28300 --------->AGL1              --------->At4g35610   --------->ICU4    <---------ANAC58 ------->MYB59          <---------At4g35610  ----------->GT1 <-----------GT1 ------MYB52(1)      <-------TEIL   --------->AHL20(2)   <---------YAB1 --->LBD16     <---------MYB52(1)   <---------AHL20(2)<---------YAB1--------->ATHB12 --LBD16  <---------ALFIN1   ------>ZmHOX2a(1)   --------->WOX13(1)<---------YAB1             <------ZmHOX2a(1)   tttggttaagtcccaccgttatattcatctcctctgaattaatcaaatagtcaattattctaattactgttgattgtctcattaacttggaatagaggag  24559500                                                               <---------AHL20(2)                                                  --------->ANAC58                                                  --------->ANAC58                                                --------->MYB52(1)     --------->At5g28300                                           --------->AHL20(2)  --------->AHL20(2)                                   <-----------GT1--------->ANAC46    ----------->GT1                                 --------->AHL20(2)         <---------ICU4                                 <---------AHL20(2)        --------->ICU4                       -----   gtttggactctatttcagttttaaaaaactgctaattaaaccagattaaaaaacgaaactactaattaaatacagtaaaatttcgaagacgtttcaatac  24559600                                                      <---------YAB1                                                   <---------YAB1                                               ------>ZmHOX2a(2)                                              <------ZmHOX2a(2)                                             <-----------ARR10<---------ICU4                                             <---------ARR14(2)     <-----------GT1           --------->YAB1--------->ARR11(3)  --------->AHL20(2)          ----------->TBP<---------ARR11(3)    ---------->DOF2  <---------AHL20(2) <---------ANAC58        --------->ARR14(2)--------->WOX13(1)  <---------ICU4     <---------ANAC58     --------->ANAC58   <---------YAB1                         < ---->ANAC46       <---------ARR11(3)     --------->ANAC58 --------->YAB1      <---------HSFB2a(2)  <   acaattaataccatagctcaatttcttcccctataaaaacagccaaggatcttactattattcatcattcaaagacaaactcgagaaaaataaactttga  24559700                                                          <---------ANAC58               -------->P                                                          <---------ANAC58             --------->MYB46(3)                                                       <---------MYB52(1)              <---------MYB52(2)                                                       --------->ARR14(2)    --------->ARR14(2)                                                       <---------ARR14(2)  --------->LBD16                                                     <---------MYB46(3)    --------->At5g28300                                                    <---------ANAC46       <xxxxxxxxxxxxxxxxsmallRNA(i)                                                ---------->DOF2<----------DOF2         <---------MYB111(1)                         *TSS--------->YAB1    --------->YAB1 <---------ANAC58         <---------MYB111(2)                    <---------ICU4            <---------YAB1  <---------ANAC58         <---------MYB55(2) ---------DAG2     <---------YAB1          <---------AHL20(2)<-------TEIL<---------LBD16------->GAMYB ----------DOF2  --------->YAB1            <---------YAB1 <---------ANAC46--------->ANAC46 --------->TOE2(3)   aacttttttttttgtgttttcatcatggctatcaaaaacttgatttttattatagcggttatgtgcgtttttgtctccgtaaatgctcaactaccacaat  24559800                                                                                     --------->LBD16                                                                                    xxxxxxxxxxxxxxxxx                                                                                    <---------LBD16                                                                                    --------->ANAC55(2)                                                                                    <---------ANAC46                                                                                    <---------ANAC55(2)                                                                                   <xxxxxxxxxxxxxxxxx                                                                                   <---------LBD16                                                                                 --------->GLK1(2)                                                                                --------->KAN4(2)                                                                               <---------KAN4(1)                                                                               <----------TaMYB80                                                                               <---------GLK1(1)                                                                              --------->ARR11(3)                                                                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                              --------->ARR14(2)                                       <------ZmHOX2a(1)                      <---------ARR14(2)                                      --------->ICU4                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                 --------->ANAC58                          <---------ANAC46<xxxxxxxxx                                 --------->ANAC58                          <---------WOX13(1)                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                        --------->GLK1(1)                               ----------->HVH21 xxxxxxxxxxx                        <---------GLK1(1)   ----------->RAV1(2)         xxxxxxxxxxxxxxxx>smallRNA(s)                       xxxxxxxxxxxxxxxx>smallRNA(s) <-----------GT1    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)           --------->LBD16  xxxxxxxxxxxxx                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)           <---------ANAC58 <xxxxxxxxxxxxx                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)           <---------ANAC55(2) <-------TEIL                    <------------MYB.PH3(1) <---------ANAC55(2)       xxxxxxxxxxxxxxxx>smallRNA(s)                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                <---------ANAC58xxxxxxxxxxxxxxx                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       xxxxxxxxxxxxxxxxxxxx>smallRNA(i2)           xxxxxxxxxxxxxxxx>smallRNA(s)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <xxxxxxxxxxxxxxxxsmallRNA(s)           <---------YAB1   --------->HSFB2a(2)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<xxxxxxxxxxx   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    --------->ANAC55(2)       --------->ANAC55(2)<xxxxxxxxxxx <---------DAG2  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)------ <----------DOF2xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<-----   ttccttttccattttcattctaaccgatttctggtatgccaggattacctgatattacaaaatgtttgtcatccgtgatggatattccgggatgcattgc  24559900                                                 <---------MYB46(3)  --------->GLK1(1)                             <xxxxxxxxxxxxxxxxsmallRNA(s)  <---------GLK1(1)                             <xxxxxxxxxxxxxxxxsmallRNA(i) xxxxxx>smallRNA(le3)                       <---------RAP2.6(2) xxxxxxsmallRNA(i2)                        <-------TEIL xxxxxxxxxxxxxsmallRNA(si3)                <---------LBD16 xxxxxxxxxx>smallRNA(se3)                  xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxxxx>smallRNA(si3)           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)              --------->ANAC58 xxxxxxxxxxsmallRNA(se3)       <------MYB83xxxxxxxxxxxxxxxx>smallRNA(s)               --------->ANAC58 xxxxxxxx>smallRNA(se3)        <------MYB46(1) <---------ANAC58                     <---------ANAC58 xxxxxxxxxxxxsmallRNA(se3)     ----------->GT1 <---------ANAC58            --------->ARR14(2) xxxxxxxxxxxxsmallRNA(si3)    --------->MYB59  <---------ANAC46    <---------AtLEC2 <---------ANAC58 --->ZAT14            --------->ANAC58    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)       <---------AtLEC2 ----ZAT14            --------->ANAC58 --------->MYB59 ---------->DOF2     <---------ARR14(2)   agagatttctcaatctattttcacaagaaaatttggtaacttaggtccggcttgttgcaaagcatttttggatgtcgaatccaattgcatgccaaaaatt  24560000                                                      --------->ABI4(2)                                                    ------->PIF5                   --------->DEAR3(1)               <-------PIF5                 <---------At4g35610               --------->LBD16 --------->REM1(1)                 --------->LBD16                  --------->ATERF1(2)               <---------LBD16                    <---------ATERF1(2)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) <---------DREB2C(2)         <---------MYB52(1)                       <---------DEAR3(1) --------->ANAC46        <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <---------LBD16   --------->ANAC46        <-------GAMYB   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  ------>ZmHOX2a(1)       <---------ANAC55(2)                       <---------ANAC46------>ZmHOX2a(1)       --------->ANAC55(2) ---------->DOF2   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <---------ATHB12------>NtERF2               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      <---------ICU4<---------ALFIN1                <---------YAB1 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      <---------AHL20(2)   ccattcattccgttatttccgccgatgctaaaagaacaatgttcaagaattgccggtgctactcctcctacaccaaaatagagtcttagtttatttttaa  24560100                                                <---------YAB1                                      <                                             <---------AHL20(2)                                     -                     ---------->ID1         --------->AHL20(2)                                   ----               <---------AHL20(2)    --------->TOE2(3)   --------->At4g35610                   <-----             ------->TEIL         <----------DOF2        <---------At4g35610               <---------YAB1    --------->AHL20(2) <----------DOF2  <---------AHL20(2)                            --------->MYB52(1)   aacatataaaatatgaattttttgtcttttcaacttctttcttaaattttataattctcagattactcaacatgttttacttaaaaaaaaacgatgatac  24560200  Previous    Next  AGI:  At5g60978.1    Description:  Encodes a ECA1 gametogenesis related family protein [pseudogene] Range:  from: 24559725    to: 24560081    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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