Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->CCA1(2)        --------->ARR14(1)       --------->ARR11(1)       <---------ARR11(3)                                                                  --------->ANAC58       <---------ARR14(2)                                                                  --------->ANAC58     ----------->ARR10                                                                  <------ZmHOX2a(2) ------>DOF2                                                                           <---------ARR11(3) ----YAB1<-------TEIL  <---------AHL20(2)                                              --------->ARR11(3) ->CCA1(2)     --------->CCA1(2)                                           --------->ARR14(2) >ARR11(1)    <---------ARR14(2)                                           <---------ARR14(2) >ARR14(2)    --------->ARR14(2)                  <------ZmHOX2a(2)        --------->ARR11(3) -ARR14(2)<---------TOE1(1)                 <------ZmHOX2a(2)    --------->AHL20(2)---------->DOF2 >ARR11(3)<---------ANAC55(2)         <---------ETT(2) <---------------AtSPL3  ----------->GT1 -ARR11(3)--------->ANAC55(2)      ----------->TGA1 --------->HSFB2a(2)    <---------ARR11(3) >ARR10--------->ARR14(2)          ----------->HVH21<---------HSFB2a(2)    --------->GLK1(2)   aaagaccaagatacgagatttggatttatttccaaggctgacgacgatcgagatcgagaagtacgaataaaaaacaaaatctggttaaagatcaagaaaa  24523000                                                                   --------->ARR14(2)                                                                   --------->KAN4(2)                                                                   <---------ARR14(2)                                                                  <----------TaMYB80                                                                  <---------KAN4(1)                                                                  --------->KAN4(1)                                                                  --------->HSFB2a(1)                                                                  <---------HSFC1(2)                                                                  <---------HSFB2a(1)                                                                 ---------->TaMYB80                                                                 <---------KAN4(2)                                                            <-------GAMYB                                                           <------MYB46(1)                                                           <---------DEAR3(2)                                     --------->AHL20(2)    <------MYB83           ------>ZmHOX2a(2)        --------->AHL20(2)    <---------DREB2C(2)       <---------YAB1             --------->TOE2(3)       <---------MYB46(3)     --------->CCA1(2) <---------AHL20(2)                 <---------DEAR3(1)    --------->ARR11(1)--------->AHL20(2)                  <---------DEAR4(1)       <----------DOF2   cagatagatatgatcgatgtgatatataatataaaacattaaaaaaacatttaccaagagtcggtggaatattcgaagagtttgcctttggaagagaaga  24523100                                              <---------ANAC58                                              <---------ANAC58                                           <----------DOF2                                <---------ARR11(3)                          ----------->GT1              <---------At4g35610 ------>ZmHOX2a(2)                 <----------DOF2           =======              --------->At4g35610<------ZmHOX2a(2)          --------->ARR14(2)              ---------          --------->TOE1(3)     --------->ARR11(3)          <-----------ARR10    <---------ANAC58          --------->AtMYB61    <---------GLK1(1)            <---------ARR11(3)   <---------ANAC58          --------->TOE2(3)    --------->GLK1(1)   <---------At4g35610    ---------->DOF2   <--------        -------->P        <---------ZAT14--------->At4g35610--------->ARR11(3) <-----------GT1------>ZmHOX2a(2)   cgatgagagcaacctcagcatcgcagagaacagagatctcatgagctttcttgagcaaaccagaccttctctttgagaaagtaacttgcctattgatctt  24523200                        -------->P                        ------>MYB83                        ------>MYB46(1)                   ------->TEIL              --------->ZAT2              ----------->RAV1(2)              --------->At4g35610                    <---------ARR11(3)              <---------At4g35610   <---------ARR14(2)              <---------ZAT2        <---------ARR11(3)        ------>ZmHOX2a(1)           <---------ARR11(1)    --------->ARR14(2) <---------ALFIN1              --------->ARR11(3)              --------->LBD16 ==============HOX2a_HOX2a          --------->ARR11(3)                         --------->MYB46(3) >ARR11(3)  <-----------RAV1(2)     --------->ARR14(2)                      --------->ANAC58        - -ARR11(3)<-----------HVH21        <---------CCA1(2)<---------GLK1(2)       --------->ANAC58        <   gttctctatcctcttcagctgaaccctacctcttcccatatctctctctcttcaaaatctcaagaacaagagagagaaacgacaaccctgaaatgaccaa  24523300                                                   <---------YAB1                                        <----------DOF2                              <---------AHL20(2)                                     <---------ARR11(3)                <---------AHL20(1)                                     <---------ARR14(2)                --------->AHL20(2)                 <----------DOF2     --------->ARR14(2)                <---------AHL20(2) <----------DOF2             <----------DOF2         --------->ARR11(3)      --------->YAB1      <---------AHL20(2) = -------->ARR11(3)                  <---------CCA1(2)       <---------YAB1      <---------AHL20(2)  < ---------ARR11(3)                  <---------GLK1(1) ------->TEIL   *TSS   <---------AHL20(2)    ---   agtatctctctctctctttctttcttatgtctctctgggtatcttttgtgttgatgaatgtgataatagctattttattttttttattttttcttttatg  24523400                               --------->TGA1a                               <---------ANAC58                <---------ANAC58                               <---------O2                    <---------ANAC46                               <---------ANAC46                --------->ANAC55(2)                               --------->ANAC58                <---------TGA1a                               <---------ANAC55(2)             --------->TGA1a                               --------->TGA2(1)               <---------ANAC55(2)                               --------->ANAC58                --------->O2                               <---------TGA2(1)               <---------O2               <---------ANAC46<---------ANAC58                <---------ANAC55(1)               <---------ANAC58<---------bZIP60(1)             <---------bZIP60(2)             <---------ANAC58  --------->O2----------->GT1     ======================================             <---------ANAC58  <---------TGA1a                 ----------->GT1            -----------        <---------ANAC58       --------->bZIP60(1)             ======================================        <------MYB46(1)     ----------->HVH21                  <---------bZIP60(1)      <---------LBD16        <---------ANAC58    ----------->TGA1                   --------->bZIP60(1) <---------------AGL15        <------MYB83    <---------ZAT14    <---------ANAC46    <---------ANAC58    <---------YAB1   <---------MYB46(3)   --------->ZAT14 <---------bZIP60(2)   ----------->STF1    --------->ARR11(3)   <-----------RAV1(1)<---------ZAT14   <---------ANAC46    ----------->TGA1      <---------ARR11(3) ========================================bZIP_DOF           ----------->HVH21    --------->YAB1 ----------DOF2<---------ANAC58--------->ANAC55(2)     <---------MYB52(1)       <---------YAB1     -- ---->TEIL   <---------ANAC46 ----------->STF1 ----------->TBP<-----------------------TaNAC69(2) ----   gacttttgttgggtttcgcgtgagtctacagtgacgtaagtgatgtggtataaatacggtatgtgacgtgaatacatagacgatgatatttgtggaaaaa  24523500   ----------->GT1         --------->TOE1(2) ---------->DOF2           --------->TOE2(2) =======bZIP_DOF         <-------TEIL >GT1                --------->ANAC58                       --------->DAG2            <-----------GT1 =======bZIP_DOF     --------->ANAC58                      ---------->DOF2    ----------->GT1 ---------------------->ANAC81                       ----------->GT1     <---------MYB46(3)       <-- ------>DOF2       ---------->DOF2--------->ALFIN1  --------->ALFIN1     <----------DOF2          ---   aaagaaagaaaaaaaaaacacaaaagctacatacgagtggaagaagagaccagagtggagataaagttttaagggctgtttgggaaataaaccatttgat  24523600                                                                                            ---------                                                                                            ---------                                                                                           --------->SPL7                                                                                           --------->SPL1(2)                                                                                          <---------SPL1(1)                                                                                          --------->SPL1(1)                                                                                          --------->MYB52(1)                                                                                         <---------SPL1(2)                                                                                         <---------SPL7                                                                                        <---------ANAC58                                                                                       <-------------                                                                                       --------------                                                                                    <---------SPL1(2)                                                                                   <---------ANAC58                                                                                   --------->ANAC55(2)                                                <---------MYB52(1)    <---------ANAC58--------->SPL7                                               <-------GAMYB ------>NtERF2         <---------ANAC58                                              <---------MYB46(3)      <---------ANAC58<--------------                           <---------At5g28300--------->MYB52(2)     --------->At4g35610<---------ANAC46            --------->ATHB12     <---------ANAC58      <---------ANAC58           --------------->AtSPL3           <---------YAB1 <-----------GT1    <---------TOE1(2)    <---------MYB52(1)<---------SPL7           ------>ZmHOX2a(1)     <---------ANAC58 --------->MYB52(2) <---------At4g35610<---------ANAC58 ---------RAV1(1)     <---------DAG2        <---------MYB52(1)   <----------DOF2<-----------GT1  <--- ------>ALFIN1        <----------DOF2 <-----------GT1  <---------ANAC58         ------------------>SPL14   gtgttgtcgagtcctcattggctactttttactgtgcttgtaactcgttcgttagttttgtgcctccctttagcttacattgtttccgtaccgtacggac  24523700                                                                          ------>ZmHOX2a(1)                                                                         --------->TOE2(3)                                                              --------->GLK1(2)  <---------YAB1                                             --------->YAB1 >ANAC58                                                    <---------KAN4(1) >ANAC58                            --------->ARR11(3)      --------->KAN4(1) --AtSPL3              <---------GLK1(1)      --------->ARR11(3) <----------DOF2 ->AtSPL3           <---------TOE2(3)         <---------ARR11(3)<---------ICU4 <---------ICU4 ----SPL14    <---------TOE1(3)     <---------ARR11(3)     <---------KAN4(2)  <-----------GT1 -------DOF2  <---------TOE2(3) ---------->DOF2    ---------->DOF2  <-----------GT1          --------   ttttgttattgtttttaaggttaagaaatcagaccaaagaactcaatagatattaaaggagaataatctttaactccttaatactttctacagtaacact  24523800                                                                        <---------AtLEC2                                                                        <---------ANAC58                                                                        <---------ANAC58                                                                        <---------ANAC46                                                                  <----------DOF2                                                                ---------->ID1                                                               <-----------GT1                  --------->AHL20(2)                     <---------AHL20(2)              <-----------GT1 ->ZAT6       ----------->GT1 --------->YAB1             --------->AHL20(2)  <----------ID1  --------   ataacgactatatatagggtttaaatattctttcaaaatgcaaattgtattttggttttttaatttttctttttgcatggagacaagtttttttctggtt  24523900  Previous    Next  AGI:  At5g60910.1    Description:  AGL8 (AGAMOUS-LIKE 8); transcription factor. Identical to Agamous-like MADS-box protein AGL8 (AGL8) [Arabidopsis Thaliana] (GB:Q38876); similar to AP1 (APETALA1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G69120.1); similar to MADS-box protein FUL-d [Brassica oleracea var. botrytis] (GB:CAD47852.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) Range:  from: 24519708    to: 24523369    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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