Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             <------MYB83           <---------ANAC55(2)           <------MYB46(1)           --------->ANAC55(2)          --------->MYB46(2)          --------->MYB59      --------->ATHB12    <---------MYB59    --------------->AGL15    <---------------AGL15                                           ----------->RAV1(2)   <-----------------AG <---------DEAR3(1)                          --------->At4g35610   ----------------->AG <---------ANAC46                         --------->HSFC1(2)   <-----------------AGL2                                        <---------HSFB2a(1)   ----------------->AGL2 <-------GAMYB                          --------->HSFB2a(1)   ----------------->AGL1<---------MYB46(3)                      <---------HSFC1(2)   <---------ANAC55(2)  --------->ETT(1)                        <---------ARR11(3)   --------->ANAC55(2)  <---------DREB2C(2)                     --------->ARR14(2)   <-----------------AGL1<---------DEAR3(2)                     <---------ARR14(2)  <-----------------------TaNAC69(2)                            <-----------ARR10             ------- <-----------GT1        <---------At1g77200                     --------->GLK1(2)             ------- ------AHL20(2)         <---------DEAR4(1)                     <---------GLK1(2)              <------ ----->AHL20(2)       <-----------HVH21                   <-----------HVH21         ================= ---->AHL20(2)       --------->ALFIN1                     <-----------TGA1          ---------->DOF2 -->ARR11(3)  --------->MYB52(1)     ---------->DOF2     --------->bZIP60(2) <---------CCA1(2)<------ ---ARR11(3) ----------->HVH21  --------->GLK1(1)   <---------GLK1(2) ----------->HVH21 --------->MYB52(1)   taattacctgattaggtaacagagtgtcggtgggattttcaaagctcgaccatagaacctcgtcagaatcttctgacccatctctgaaaagaacgaagtt  24518300         ---------->DOF2      ----------->GT1   <-----------HVH21                                      ----------->HVH21   <-----------TGA1                  --------->ANAC58   ----------->RAV1(2)  ==================bZIP_DOF         --------->ANAC46<---------ZAT2  <---------ETT(2)                   --------->ANAC58--------->ZAT2  --------->TGA1a                  --------->AtMYB61 <---------At4g35610 <------NtERF2     ----------  --------->ETT(2)                 <---------ALFIN1--------->ANAC46    <---------WRKY38(1) --------->At4g35610 -->HSFC1(2)                     ------>NtERF2  <---------REM1(2)      <---------WRKY12    <---------At4g35610 -->HSFB2a(1)                  --------->MYB46(3)<---------ALFIN1    <-----------HVH21--------->RAP2.6(2) ---HSFB2a(1)       --------->HSFB2a(2)    ------->GAMYB--------->At4g35610           --------->ANAC58 ===========bZIP_DOF<---------HSFB2a(2)<---------WRKY38(1)------>ZmHOX2a(1)           --------->ANAC58 ---HSFC1(2)    --------->DEAR3(1)--------->MYB46(3) --------->At4g35610 --------->At4g35610   tccgtcgtcagtaaatcgccctcgagaaacagagccaccactcaacgctctccacagctcctgacctcgagggtcagcgataaccagaccgccatctgca  24518400                                                 <---------ANAC58                                                 <---------ANAC46                                               ------>NtERF2                                              <---------RAP2.6(2)                                             --------->RAP2.6(3)                                           --------->WRKY12                                           ----------->HVH21        --------->TOE2(2)          --------->MYB55(2)                                          ------        --------->TOE2(3)          --------->MYB52(2)         <---------ALFIN1                 ------        --------->TOE1(3)          <---------MYB46(3)       <---------ALFIN1     --------->ARR11(3)        --------->TOE1(2)         --------->ALFIN1          ----------->RAV1(1)  <---------ARR11(3)       <---------HSFB2a(1)        <---------AtMYB61    <---------ANAC58         <---------GLK1(1)     <-----------GT1  <----------ID1    <---------ANAC46  --------->SPL7        --------->GLK1(1) <---------TOE2(3)<---------MYB52(1)<-------GAMYB<---------ANAC58    --------->ARR11(3)--------->HSFB2a(2) ->RAV1(2)     --------->MYB46(3)<---------MYB52(1)    <---------ANAC58   <-----------HVH21    ------   gttaatgtaaccttcgaaccattagggacaagaccggtggttgtgttgacggcttgtgcgtgccacacgatggtcttgtcagaaatcttgtcgaaccaaa  24518500                            ------>ZmHOX2a(2)                          --------->ARR14(2)                          <---------ARR14(2)                          <---------ARR11(3)                          <---------AGP1                          --------->ARR11(3)                         <---------CCA1(2) --------->ANAC58                        <------MYB46(1)    --------->ANAC58                        <------MYB83     ---------->DOF2         --------->ANAC58                      <--------P --------->LBD16                 --------->ANAC46                     <-------GAMYB     --------->ANAC46          --------->ANAC58                    <------MYB46(1)--------->ARR14(2)          <---------DOF5.7(2)                    <------MYB83<---------ANAC58           <------MYB46(1)                    <---------MYB46(3) --------->ANAC58    <------MYB83                 <---------MYB52(1)<---------ARR14(2)   <---------MYB52(1)              <---------MYB52(1)--------->HSFB2a(2)  --------->At4g35610           --------->MYB46(3)   <---------ANAC58 <-----------HVH21    ----------->GT1<---------AtMYB61   --------->ANAC58--------->LBD16 >MYB83    <------------AtMYB77 <---------HSFB2a(2)  <---------LBD16                           ------ --->MYB52(1)<-----------HVH21  --------->ANAC55(2) --------->MYB52(1)             <-----------RAV1(1) >MYB46(1) --------->DEAR3(2)  <---------LBD16---------->DOF2 <---------WRKY38(1)  <---------MYB46(3)   tggagagagtgaaaccgtcgtttggttggatcttgcggaacccgaaagcaaagtcaccggaaggtgaacgccatgaactagagatttgttgggactctga  24518600               ------>NtERF2               ----------->RAV1(1)              --------->ANAC46              ----------->HVH21         --------->GLK1(2)        <---------GLK1(2)        --------->ARR14(2)      --------->ARR14(2) --------->At5g28300            <---------ARR14(2)   ----------->GT1                         -------- <-----------HVH21  <------ZmHOX2a(1)                <----------ID1                 <-----------RAV1(2) ---->DOF2    <---------ETT(1) <---------MYB52(1)  --------->MYB52(1)         --------->YAB1<--------   agcggtgagagattctccgacaggaacagagccgtttctgatgttttgagaaaaaacgaaaaatgtttgtagttgcagaataagaaccagatggattatt  24518700                                                          ----------->GT1                                                     --------->ARR14(2)                                                     <---------ARR14(2)                                                  <---------ANAC58                                 <---------REM1(1)<---------ANAC58    ---------->DOF2             --------->ARR11(3)<---------ANAC46  --------->ANAC58          ---------->DOF2    --------->TOE2(2)  --------->ANAC58       --------->ANAC58    --------->ARR14(2)                                    <- ->ATHB12                --------->ANAC58  <---------AHL20(2)            <----------DOF2       ------ -YAB1             <-----------GT1        --------->AHL20(2)       ---------->DOF2    --------->ZAT6   gaacaagaaagagaacccattttactgaagcaaagatgtagagattaaatctgcgtatatgtgtaaatataaagactttttagttctaactctctgagtc  24518800                                                 <------ZmHOX2a(1)                                     <---------------AGL15                <---------ANAC58                                     <----------DOF2                      <---------ANAC46                            --------->MYB52(1)  <------MYB46(1)           <---------ANAC58         <-                            ----------->RAV1(1) <------MYB83          <-------GAMYB          <-------                        --------->ANAC58  <---------TOE1(3)          <---------MYB46(3)      <-------            <-----------RAV1(2)------->GAMYB   --------->MYB59      <---------YAB1          ---------   ------------>CBF     --------->ANAC58  <---------TOE2(3)         <---------TOE2(3)       <-------- --------ATHB12       ---------->DOF2--------------->AGL15      <------------CBF           <<<<<<<<<RAP2.2 ------>CBF ============================RAV   <--------P      <---------ZAT14          <----------DOF2   aatgactcaatggaccaggttttgaaaagccaacagagacttttaagggtaggaacaaatagactacattgtggttgtgtgtgttttgtctttagatatt  24518900                                                                             <---------ANAC58                                                                             --------->ALFIN1         --------->ANAC46                                           --------->TOE1(2)       <---------DOF5.7(2)                                          --------->TOE2(2) <------------CBF                   ----------->GT1    <<<<<<<ZML2 <---------ANAC58 --------YAB1                     ---------->DOF2      --------->ARR11(3)    <---------ANAC58 --RVE1(1)               <---------YAB1                <---------ARR11(3)  --------->ALFIN1 --CCA1(1)           <---------GLK1(2)              <---------HSFB2a(2)<---------ANAC58      <------- >ARR11(3)   ---------->DOF2    --------->ANAC58    --------->HSFB2a(2)<---------ANAC58      <------- -ARR11(3)--------->TOE2(3)     --------->ANAC58 <---------YAB1    <---------ANAC58          <-------   tctgattgtaaacgtaaaagatggattatcaaacaagaaagtaaatccattctgctagaacttgagattacatgcgagtgtgtgtgtgtttgtttgtgtg  24519000                                            <---------TOE2(2)                                          --------->TOE1(2)                                 <---------YAB1                              <---------MYB52(1) --------->DAG2                             <-------GAMYB--------->TOE2(2)                                    <----- --ANAC58                   --------->MYB52(2) ---------->DOF2                   <----------DOF2  --- --ANAC58                   <---------MYB46(3)<------ZmHOX2a(1)           <---------ANAC58   -------- --ANAC46            <---------ARR14(2) ------->TEIL  <--------P          <---------ANAC58  <--------   tgtgtgtgtgtttgcataatgtagatttgttcgttactattgaacgtaggaaaggggttgagaagacttagacatttcttgttctttctcttagtcaatg  24519100       <---------YAB1   <---------ARR14(2)                                                                  <------ZmHOX2a(1)   --------->ARR11(3)                                                                 <------MYB83 <-   --------->ARR14(2)                                                                 <------MYB46(1)   <---------ARR11(3)                                                                --------->MYB59   <---------GLK1(2)                                          <-------MYC3      <---------TOE1(3) <-- ----ATHB12                                   <---------ANAC55(2)               <---------TOE2(3)<--- ---->TEIL                                    --------->ANAC55(2)          <---------------AGL15 ---- ->WOX13(1)                               --------->YAB1      ------->MYC3 <----------DOF2 ---------- -WRKY38(1)  ----------->GT1    ------>ZmHOX2a(1)    <---------ANAC46---------->DOF2<--------P ------   aaccagattttgaaagagtcaaaagtctcttctcctccatacaatattacttaagtcgtgaacatgtgttctaaagtcttttaagggtaggaacaaagtg  24519200  Previous    Next  AGI:  At5g60900.1    Description:  RLK1 (RECEPTOR-LIKE PROTEIN KINASE 1); carbohydrate binding / kinase. similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G34300.1); similar to CCHC-type integrase [Populus trichocarpa] (GB:ABG37663.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Curculin-like Range:  from: 24515693    to: 24518720    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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