Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <---------WOX13(1)                 <----------DOF2       >>>>>>>>>ARR2                     ---------->ID1       --------->ANAC58     <---------AHL20(2)                 <-----------GT1       --------->ANAC58     <---------YAB1              ------->TEIL             --------->YAB1 ------>YAB1                  <---------ANAC55(2)       ------->TEIL ------>AHL20(2)              --------->ANAC55(2)    --------->ANAC55(2)   taaaaatttgattgtttaagaaacaatttgatatgtatcatttttctttttttttatgtatcataagaaaccagaaaactacttaacatttttaagaagg  24497300               --------->ATHB51               <---------ICU4               --------->ATHB12               -------->ATHB1                                                              --------->AHL20(2)              --------->AHL20(1)                                                   --------->TGA1a              <---------YAB1                              <---------AHL20(2)       <---------TGA1a              <---------AHL20(2)                   <---------TGA1a                 ==================              <---------ATHB51                     --------->O2                    <---------O2              --------->ICU4                       <---------O2                    <---------ANAC46 -            --------->YAB1                         --------->TGA1a                 --------->O2  ----  <---------At5g28300                     <---------AHL20(2)                       ================== <-----------GT1       --------->ICU4     --------->AHL20(2)              --------->AHL20(2)---------   aagttacagttcaaaaattattgcaattttgaaactatagggatttaaattcgacgtgatttttttttttggacataaaaattcgacgtgaaataaaaga  24497400                        --------->ATHB12                        --------->ATHB51                        -------->ATHB1                        <---------ICU4                        <------------ATHB5                        --------->YAB1                        <--------ATHB1   <-----------GT1     --------->ICU4                       --------->AHL20(2) ==bZIP_DOF            <---------ATHB12                    <---------AHL20(1) ------>TEIL         --------->WOX13(1)                    --------->AHL20(1) ------->GT1       <---------YAB1              <----------DOF2 ==bZIP_DOF      <-----------GT1    <XXXXXXXXXXXXXXXXXXXXXMIR393A/B   ------->GAMYB <---------ATHB12 ->DOF2   <----------DOF2          <---------MYB46(3)     --------->AHL20(2)  <-----------GT1     ---   tgtatatacactcttttttttatcaatcattggacgtttgatgcgactcctttggcataaatatatatacaaccgaaatataacaaatcacttcaatgcc  24497500                 -------->HAHB4                 <---------ICU4                 <--------ATHB1                <---------ATHB51                --------->ICU4              --------->YAB1          --------->AHL20(2)          <---------AHL20(2)         --------->AHL20(2)       --------->YAB1   <---------CCA1(1)   <---------RVE1(1)                                                           ----------->GT1  <---------ARR11(3)                                                         <------------CBF  --------->ARR11(3)        ------>NtERF2                           <---------ALFIN1  --------->AHL20(1)       <---------PCF2      <---------At4g35610--------->RAP2.6(2) --------->YAB1 <---------YAB1------------>ATHB5                  ----------->RAV1(1)             <-- ------->DOF2<---------AHL20(2)  <---------DAG2--------->At4g35610<---------ALFIN1           --------   caaagatattaataaataataattccatggggccaatttttggactcgaagctaacttctgaatacagccacactatgggattgtaaaatgcaaaatatc  24497600                                                        <----------DOF2                                                   --------->CCA1(2)                                                   <---------GLK1(1)                                                   --------->ARR14(1)                                                   --------->GLK1(1)                                                  --------->ARR11(3)                                                  --------->ARR11(1)                                                  <---------ARR11(3)                               <-     <---------KAN4(2)                            --------->ARR14(2)       *TSS                  <---  ----------->GT1                             ---------->DOF2        --------->HSFB2a(2)        ----- ---------RAV1(2)     <---------ARR11(3)    <---------YAB1 <-----------HVH21    <----------DOF2 ----- ->RVE1(1)--------->YAB1           --------->ZAT14<---------ARR14(2) <---------HSFB2a(2)      <------   acaggggtataatcgtagttccaagataaactgcctgttcagacatatgaaagatatgctttgtcagagtttcagaacaagtctttcccatgctcaccac  24497700                                                                                     --------->YAB1                                                                                <----------DOF2                                                                         --------->AHL20(1)    xxxxxxxxxxxxxxxx>smallRNA(i)                           ------>MYB46(1)<---------AHL20(2) ----------GT1                   ------>MYB46(1)           ------>MYB83<---------AHL20(1) --------HVH21                   ------>MYB83            <---------MYB59 <---------AHL20(1) ---->bZIP60(2)       <---------ALFIN1                <-----------GT1  --------->AHL20(1) <---------CCA1(2) ---->ANAC46         <---------ZAT14              --------->AHL20(2)--------->AHL20(2)  <---------ICU4 ---ALFIN1   <----------DOF2  --------->MYB46(3)  --------->YAB1  <---------WOX13(1)<---------YAB1   ttcacctctctctctctttcttctccactgtaacctcccaattcaaaaacaattataaaccaaacttgattaatatatatttctttatcatcatctcttc  24497800                                                                                            ---------                                                                                            <--------                                                                                           <------ZmHOX2a(1)                                                                                         --------->ALFIN1                                                                                        --------->ATERF1(1)                                                                                      <---------ANAC46                                                                                      <---------DEAR3(1)                                                                                      --------->ALFIN1                                                                                     --------->At4g35610                                                                                     <---------ABI4(1)                                                                                     --------->ATERF1(1)                                                                                     <------NtERF2                                                                                     <---------At4g35610                                                                                    <---------ERF1                                                                                    <---------ORA47(2)                                                                                    <---------DEAR4(2)                                                                                    <---------RRTF1(1)                                                                                    <---------ATERF1(1)                                                                                    <---------RAP2.6(1)                                                                                    <---------RAP2.3(1)                                                                                    ------>NtERF2                                                                                   <---------DEAR3(1)                                                  --------->ALFIN1                 <---------RRTF1(2)                                           <XXXXXXXXXXXXXXXXXXXXXMIR472            <---------RAP2.3(3)                                           <------NtERF2                           <---------ATERF1(2)                                          <---------MYB46(3)                       --------->ATERF1(2)                 <---------GLK1(1)       <---------ANAC46                          --------->DEAR3(1)               --------->ATHB12        <---------MYB46(3)                          <---------RAP2.6(2)               <---------ICU4          --------->MYB55(2)                          <---------RAP2.3(2)              --------->ICU4          <---------AtMYB61                            <---------RRTF1(3)              <---------YAB1          --------->ALFIN1                            <---------LBD16            --------->YAB1          <------MYB46(1)                               <---------ABI4(1)           <-------TEIL             <------MYB83 <------ZmHOX2a(1)                --------->ATERF1(1)        <---------RVE1(1)          --------->ALFIN1                             <---------DEAR3(1)       --------->ARR14(2)          --------->MYB55(2)                         --------->ARR14(2)       <---------ARR14(2)          --------->MYB111(1)  --------->ALFIN1     <---------ARR14(2)<-----       <---------ARR11(3)          <---------MYB46(3)--------->ALFIN1        --------->ARR14(2)------       --------->ARR11(3)          --------->MYB111(2) <------ZmHOX2a(1)<---------MYB46(3) ==========       <---------ARR14(3)          <---------AtMYB61<------ZmHOX2a(1)  --------->ALFIN1 <------NtERF2       --------->ARR14(3)         <--------P<---------ANAC46 <------MYB46(1)=========================     --------->ANAC58       ------->TEIL --------->ALFIN1    <------MYB83   <------ZmHOX2a(1)  <-----     --------->ANAC58      --------->MYB52(1)  --------->ALFIN1      <---------ANAC46<---------LBD16   gaaatgcaagatattcatgatttctccatgaacggagttggtggtgggggaggaggaggagggaggtttttcggtggaggaatcggcggcggaggaggtg  24497900                                             --------->WOX13(1)                                           <---------YAB1                                          --------->TOE2(3)       <------ZmHOX2a(1)                 --------->YAB1      ------>ZmHOX2a(1)  ------>ZmHOX2a(2)             --------->ANAC46         <---------ZAT18 >ALFIN1                        --------->ANAC55(2)   =======================================bZIP_DOF -AtMYB61                    <---------AHL20(1)       --------->TGA1a ----AtMYB61       --------->At4g35610------->GAMYB   <---------TGA1a --->ALFIN1   --------->At4g35610     ==========================MYC_MYB                    <---------MYB52(1) ========HOX2a_HOX2a         <---------ARR11(3)       <---------O2                =================== ========HOX2a_HOX2a--------->YAB1    --------->YAB1  --------->O2                ---------->DOF2 ----DEAR3(1) <---------At4g35610    --------->MYB46(3)  --------->ZAT18       --------->ZAT6    ----   gtgatcgaaggatgagagctcatcagaacaatatacttaaccatcatcaatctctcaagtgtcctcgttgtaattctcttaacacaaagttctgttacta  24498000                                                                                                <----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                              -------                                                                                           <---------ZAT2                                                                                          <---------AtMYB61                                                                                     <-----------HVH21                                 <---------AtLEC2                                   --------->ANAC46-                            <---------DAG2                                    --------->HSFB2a(1)   -                            <----------DOF2          <---------ZAT18          <---------ANAC58<------                       <-----------TGA1              <---------ZAT14          <---------HSFB2a(1)  <-                       <-----------HVH21     <------NtERF2---------->DOF2  <---------MYB52(1)<-------                      --------->TGA1a<---------ARR11(3)   --------->MYB52(1)  <---------ANAC58-------                      --------->O2 --------->ANAC58  --------->ZAT18     --------->ANAC55(2) --------    --------->YAB1    =================bZIP_DOF <---------MYB52(1)       --------->ANAC46 <---------DEAR3(1) <---------ICU4       --------->bZIP60(2)  <---------ETT(2)    --------->ALFIN1 --------->DOF5.7(2)<- ===============================bZIP_DOF<-----------RAV1(1) --------->DAG2--------->LBD16<------NtERF2 ----->REM1(1)        <---------O2 --------->ANAC58  --------->ZAT14    <---------LBD16<---------DEAR3(1)   caacaattacaatctttctcagcctcgtcacttttgcaagaactgtcgtcgttactggactaaaggtggtgttctccgtaacgttcccgtcggaggtggt  24498100                                                              ------->GAMYB                                                              ===============================MYC_MYB                                                             --------->MYB46(3)           ===========                                                            ------>MYB83                  <------ZmHOX2a(1)                                                            ------>MYB46(1)               ===========                                                           --------->MYB52(1)           <---------ANAC46                                                          --------->TOE1(2)          --------->ALFIN1                                                          --------->TOE2(2)         ------->MYC3     --------->ANAC58                              ------>NtERF2                    <-------MYC2     --------->ANAC58                              <---------RAP2.6(3)              ------->MYC2   ---------->DOF2                                --------->RAP2.3(3)               <-------PIF5  <------NtERF2                                   --------->DEAR3(1)                ------->PIF5 <---------RAP2.6(3)                              --------->RAP2.6(2)               <-------MYC3 --------->LBD16                                  <---------ETT(1)                 <---------O2 ----P                                          <---------At4g35610                <---------TGA1a --GAMYB                                        --------->At4g35610--------->ANAC46<---------ANAC55(2) ----ANAC58                                   --------->MYB46(3)   --------->ANAC58<---------ANAC46 ----ANAC58                                  --------->At4g35610 ------>NtERF2     <---------bZIP60(2) -->MYB55(2)                                 <---------At4g35610--------->DEAR3(1) --------->O2 -------->LBD16                          <-----------TGA1<---------MYB52(2)   --------->YAB1 -------->ETT(1)                       <------NtERF2     --------->MYB46(3)   <---------ICU4 ---MYB46(3)                         <---------DEAR3(1)  <---------MYB55(2)  <---------YAB1 --------ANAC46                   <---------ANAC46------->GAMYB <---------DEAR3(1)------------>OsbHLH66 --AtMYB61                        <---------ANAC58===========================================MYC_MYB -->MYB111(2)                     <---------ANAC58--------->DREB2C(2)       --------->ARR11(3) ->ALFIN1    --------->TOE1(2) <---------ARR14(2) --------->At1g77200       <---------ARR11(3)------- --------LBD16                 --------->ARR14(2)--------->DEAR3(2)--------->ANAC58--------->TGA1a<--   tgccggaaagctaaacgttcgaaaacaaaacaggttccgtcgtcgtcatcagccgacaaaccaacgacgacgcaagatgatcatcacgtggaggagaaat  24498200  Previous    Next  AGI:  At5g60850.1    Description:  OBP4 (OBF BINDING PROTEIN 4); DNA binding / transcription factor. Identical to Dof zinc finger protein DOF5.4 (DOF5.4) [Arabidopsis Thaliana] (GB:Q8LDR0;GB:Q9FJH1;GB:Q9XGU5); similar to Dof-type zinc finger domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G65590.1); similar to Dof4 [Glycine max] (GB:ABI16005.1); contains InterPro domain Zinc finger, Dof-type; (InterPro:IPR003851) Range:  from: 24497675    to: 24499099    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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