Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                                   --                                                                                                   --                                                                                            <--------                                                                                         <---------ARR14(2)                                                                                         --------->ARR14(2)                                                                                      ---------------                <---------AHL20(2)                                                    <--------------            ------>ZmHOX2a(1)                                                        <---------------        <---------ARR14(2)            ---------->DOF2                                ----------------        --------->ARR14(2)          <---------ATHB12                                 <---------------   --------->MYB52(1)        --------->TOE1(3)                   --------->ALFIN1    ----------------   <---------ALFIN1          --------->TOE2(3)           --------->YAB1              ----------------  ----------->HVH21    --------->AtMYB61          --------->GLK1(2)            --------->YAB1     <--   aaccctcacggttcctattttaaaaccaaaaccttcaaatcaaagactcaagaatcaattcataaatgtgtgagacaaaactcataacccaaatatggta  24467700    --------->TOE1(2)   --------->ANAC55(2)   <---------ANAC55(2)  <-------TEIL  ------->TEIL  <---------TOE2(2)  <---------TOE1(2)                                                           --------->YAB1 ------->ANAC58                                                               <--------HAHB4 ------->ANAC46                                                               <---------ICU4 ------->ANAC58                                                      ---------->ID1 -------AtSPL8                                                      <-----------GT1 >AGL15                                                          <---------ICU4 -AGL15                                                          --------->AHL20(2) --AGL2        ------->TEIL  ---------->DOF2                     <---------AHL20(2) ->AG      --------------->AtSPL3       <---------YAB1        --------->AHL20(2)        --------->YAB1 --AGL3    <---------------AtSPL3   --------->YAB1           --------->AHL20(2)        <---------ATHB12 ->AGL3    <---------------AtSPL8   --------->AHL20(2)       <---------AHL20(2) <---------YAB1 ->AGL2    --------------->AtSPL8--------->YAB1          <---------AHL20(2)  <---------YAB1<---------ICU4 -------------AtSPL3    <----------ID1 <---------AHL20(1)--------->AHL20(2)  <---------ATHB12 <------   cacgtacgtatgaaacgtacttaaatgctacaaaagaataatatgtttagttctcaaatttaaataattttttccttctatcattactaatcaaaattac  24467800                                        <---------AHL20(2)                                       <---------AHL20(1)                                       <---------AHL20(2)                                       --------->AHL20(2)        <---------YAB1                                 --------->YAB1                  ------>ZmHOX2a(1)                                --------->ZAT6             --------->DAG2                               ------------>CBF           ---------->DOF2                              --------->MYB52(1)<---------------AGL15                              --                            <---------MYB52(2)  --------------->AGL15                              <-                           --------->ZAT2      <-----------------AGL1         --------->ANAC55(2)  --                           <---------At4g35610 <-----------GT1   --------->ICU4    --------->TOE2(3)<    <---------ARR11(1)     --------->At4g35610 <-----------------AG      <----------DOF2          ---   <---------CCA1(2)  --------->YAB1--------->YAB1     ----------->GT1<---------AHL20(2)          <-- -----GT1            <---------YAB1<---------ATHB51 <------------CBF  <-----------GT1      <---------CCA1(2)   aactcatatctatactaaatgctattatcagctaacaataataaaattttcacaaattggtaaagtccttattaacttttacttatcttattcaaatctc  24467900                       ------>MYB46(1)                       ----------->RAV1(1)                     --------->MYB46(3)                     <---------MYB55(2)           <---------MYB59           <---------MYB111(2)           --------->AtMYB61           <---------MYB55(2)           <---------MYB46(2)           <---------MYB52(2)           <---------MYB111(1)          --------->ANAC58          --------->ANAC46          --------->ANAC58         ------>MYB83<---------MYB111(1)         ------>MYB46(1)        <---------ALFIN1       --------->MYB46(3)       <---------MYB59--------->ANAC46     <---------TCP15(1)------>MYB83    --------->ARR14(2)     --------->PCF2-------->P          <---------ARR14(2)     <---------TCP20 <---------MYB111(2) ------->ATHB51    ------>MYB46(1)    <---------GLK1(1)                                             - --------ICU4------>MYB83        <------------CBF                                             ------>MYB83 ------->ATHB12--------->ZAT6  --------->ARR11(3)                                             ------>MYB46(1) ------------CBF   ------>MYB83<---------ARR11(3)         <---------AHL20(2)                 -------- ------>ICU4 ------>MYB46(1) <---------YAB1             ----------->TBP                     --------- -------YAB1--------->MYB55(1)--------->YAB1 ----------->RAV1(2)   <---------AtLEC2      --------->REM1(1)   attattggacccacctaaccctacccaccatatgatattggtatcccctctggcctctatataaactttgcatttctctaatctccaacttacaccaaca  24468000                                                                                             --------                                                                                           >>>>>>>>>>                                                                                        --------->HSFB2a(1)      ---------->DOF2                                                                   <---------HSFB2a(1)   ----------->RAV1(1)                                                           <---------ATHB12  -- -------->ANAC46            <---------ALFIN1<---------At4g35610         xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) --->RAV1(1)           ---------->ARF1      --------->At4g35610         --------->MYB46(3) <<<<<<<<<< >AtMYB61     <---------MYB52(1)   <---------GLK1(2)                 --------->MYB46(3) --------->HSFC1(2)   aaacacaacaaagaccattagccttctctcccactcagagtctttcatctcactctcgccttaaatgactcacaaccattctaatgaagaaggctccatt  24468100         <---------ANAC58         <---------ANAC46         <---------ANAC58 --------->HSFC1(2)                                                                     --------->MYB46(3) <---------HSFB2a(1)                                  --------->HSFC1(2)              ----------->RAV1(1) <---------HSFC1(2)                                   <---------HSFC1(2)           <------ZmHOX2a(2) --------->HSFB2a(1)                                  --------->HSFB2a(1)         <---------ARR14(2) ->ATHB12<---------AtLEC2                             <---------HSFB2a(1)         --------->ARR14(2) >>>>>>>LFY                                     --------->LBD16             --------->YAB1--------->At4g35610 ------->ARR14(2)          <----------ID1       <-----------HVH21          <---------ATHB12 <<<<<<<LFY       <---------At5g28300    <----------DOF2                 --------->WOX13(1)   ggaacctccttgcatggagttacagcaagagaacaagtcttctctttctccgtcgatgcttcgtctcaaacagtccaatcagacgatccaacagctaaat  24468200                                                                        <---------HSFB2a(1)                                                 =========================bZIP_DOF                                           ------>MYB46(1)              --------->HSFB2a(1)                                           ------>MYB83                 --------->HSFC1(2)                 --------->LBD16          <---------ALFIN1      --------->O2         <--------P                      ------->GAMYB          <---------TGA1a        <---------MYB52(1)               =================================MYC_MYB        <-------GAMYB                  --------->ANAC46         <---------O2       --------->LBD16       =============================================bZIP_DOF  <------ZmHOX2a(1)     <---------LBD16         ---------->DOF2     <----------DOF2--------->TGA1a   <---------TOE2(3)   tcgcccttccggttgattccgaacatcgagccaaagtgttcaacccactctcttttgctaaacctcacatgagagccttccacttaggatggctctcatt  24468300                            <------NtERF2                            --------->At4g35610                            <---------At4g35610                            <---------ZAT2                         --------->At4g35610       ----------->HVH21                         <-------                         <------NtERF2             --------->ANAC46                          --------                       --------->ANAC46           --------->LBD16                          --------->LBD16                      <---------LBD16       <---------ATHB12                             <---------LBD16                   <-----------HVH21       <-----------HVH21    <---------MYB59        --------->ANAC58           --------->At4g35610            --------->ANAC46   <---------ALFIN1          --------->ANAC58           <---------At4g35610----------->RAV1(1)--------->ANAC46           ----------->RAV1(1)    --         --------->REM1(1) <---------ATERF1(1)  <---------LBD16 --------->AtMYB61   --------->ARR14(2)   ------->MYC3   --------->AtMYB61    <---------ZAT18    --------->TOE2(3)--------->DREB2C(2)     <-   <-------MYC3<---------ALFIN1   <---------MYB52(1)------>NtERF2         --------->DEAR3(2)<------NtERF2   cttcacatgcttcatctccaccttcgcggcagcaccattagtccccatcatccgcgacaacctcgacctcactaaaaccgacattggaaacgccggagtc  24468400                                                                  --------->CCA1(2)                                                                 --------->ARR14(2)                                                                 <---------ARR14(2)                                                               --------->ANAC58                                                               --------->ANAC46                                                               --------->ANAC58                                                            --------->ZAT18                         -                                                            <---------ZAT18                         <                                                        <---------DEAR3(1)                        ---                                                       ------>ZmHOX2a(1)                       ------         --------->At4g35610                       ------>ZmHOX2a(2)                           ------         <---------At4g35610                      <---------GLK1(1)                            ------        <-----------RAV1(1)                       --------->GLK1(1)                           <------ --ARR14(2)  <------NtERF2                       <---------ARR11(3)                           ------- ->ARR14(2) ------>NtERF2              <---------At4g35610  --------->ZAT14                   ------- ------->ARR14(2)       <---------TOE2(3)        --------->ARR11(3)                           <------ --------ARR14(2)       <---------TOE1(3)<---------MYB46(3) <---------ZAT14                 ---------   gcatccgtctctggtgccattttctcaaggttagccatgggagcggtttgtgatctcctcggtgcacgatatgggactgccttctccctcatgctaaccg  24468500    ------->GAMYB   --------->MYB46(3)   <------------AtMYB77  -------->P                         <---------ANAC46  ------>MYB46(1)             <------NtERF2                                       <-------MYC3  ------>MYB83              --------->ALFIN1                                      ------->MYC3 --------->MYB52(1)         <---------DEAR3(1)                                   <---------TGA1a <---------ALFIN1         <---------ANAC58                                       --------->O2 -------->MYB46(3)        <---------ANAC58                                       --------->TGA1a ---------ALFIN1         --------->MYB55(2)                                     ------>NtERF2 ------>RAP2.3(3)        <---------MYB46(3)                                 --------->ANAC46 ->GAMYB                <---------ANAC46          <---------SPL7    --------->GLK1(2) --->DEAR3(1)         <---------MYB46(3)         <---------ANAC58  <---------GLK1(2) --->ANAC46           --------->MYB52(2)--------->ARR14(2)   --------->ATHB12  <---------ALFIN1 ---MYB55(2)          <-----------RAV1(1)        <---------ANAC58  --------->ARR14(2) -->MYB46(3)        <---------MYB52(1)  <---------ARR14(2)  <---------YAB1  --------->ANAC58  <------ -->DEAR3(2)      <---------ANAC46 --------->MYB52(1)    <-------TEIL       --------->ANAC58  <------ ------AtMYB77    <---------ANAC58--------->STY1(1) --------->SPL7 <---------ARR14(2)     --------->YAB1 >MYB52(1)        <---------ANAC58<---------STY1(1)<------NtERF2------>ZmHOX2a(2)<---------O2 -------   ccccaaccgtcttctcaatgtcgtttgtgggtggccctagcggatacttaggcgtccggttcatgatcggattctgtctcgccacgtttgtatcatgcca  24468600  Previous    Next  AGI:  At5g60780.1    Description:  ATNRT2.3 (Arabidopsis thaliana high affinity nitrate transporter 2.3); nitrate transmembrane transporter. similar to ATNRT2.6 (Arabidopsis thaliana high affinity nitrate transporter 2.6), nitrate transmembrane transporter [Arabidopsis thaliana] (TAIR:AT3G45060.1); similar to ATNRT2:1 (Arabidopsis thaliana high affinity nitrate transporter 2.1), nitrate transmembrane transporter [Arabidopsis thaliana] (TAIR:AT1G08090.1); similar to ATNRT2.4 (Arabidopsis thaliana high affinity nitrate transporter 2.4), nitrate transmembrane transporter [Arabidopsis thaliana] (TAIR:AT5G60770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16790.1) Range:  from: 24468065    to: 24469982    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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