Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  --------->AHL20(1)                <---------AHL20(1)               --------->AHL20(2)               --------->YAB1           <---------YAB1          <----------DOF2         =====================================HOX2a_HOX2a         ------>ZmHOX2a(2)        <------ZmHOX2a(2)       --------->ARR14(2)       <---------ARR14(2)       <---------ARR11(3)                <---------GLK1(1)       --------->ARR11(3)                --------->GLK1(1)     --------->DEAR3(1)    <---------ZAT18   ------>NtERF2<---------AHL20(2)      <---------ARR14(2)  --------->DEAR3(1)       --------->ZAT14                                                       ---- --------->DEAR3(2)  --------->YAB1     --------->ARR14(2)                                       <--- ---------At5g28300 <---------YAB1     <------ZmHOX2a(1)    ---------->DOF2            --------->DAG2 ----------GT1<---------YAB1        --------->YAB1       --------->AtLEC2             ---------->DOF2   tataccgccgatctttattatattgatagtaaactctatgaggatttgctgtattagacatgaaaagaaatcgttgtaaacagaaccagaaagtagtttc  24461200                                                          <---------AHL20(1)                                                          <---------AHL20(2)                                                          --------->AHL20(1)                                               <---------ZAT14                                               --------->ZAT14                                   --------->CCA1(2)    <---------YAB1 ----------->AGL15                <---------ARR11(3)   --------->AHL20(2)                           - ------------AGL15             ------>ZmHOX2a(1) ----------->GT1                             --------   tcgtttgagaaaaaaaaaaaaaaaaaaaacttcctagatatatggacagtttagtaatattatattgttgataaatactaaattggaatataagtgaaag  24461300                                                            <----------TaMYB80                                                      ----------->GT1                                                    ---------->DOF2        <---------YAB1                                                 ------>NtERF2            <---------AHL20(2)                                                 <------NtERF2<-----------GT1                                                 --------->RAP2.3(1)      --------->AHL20(2)                                                --------->LBD16         <---------YAB1             --                                       <---------AtLEC2     <---------KAN4(1)                    <---                                       <---------ANAC58     --------->KAN4(1)                  <-----           <---------SPL7              <---------ANAC58    <---------KAN4(2)        --------->ANAC46 ------>TEIL  ----------->HVH21<---------ANAC46<---------DEAR3(1)     --------------->AGL15---------- -->DOF2  <---------ANAC46<---------GLK1(2)   <---------LBD16--------->KAN4(2) ---------->DOF2 <-----   tgaacctttgggacgtatgaccaggctaaattctcgtgtttgcatgctcgcggcgaaagtgaatattccatactattaatataaagacacaacttgtata  24461400                                         --------->TOE1(3)                                         --------->TOE2(3)                                       <---------TOE2(3)                                     -------->HAHB4                                     --------->YAB1                                     <---------ICU4                                    --------->ICU4                                  --------->YAB1                                 --------->AHL20(2)                               ------->TEIL                                 <---------AHL20(2)                               <---------ARR14(2)                               --------->TOE2(3)                           ---------->DOF2    <---------ATHB12          <---------ICU4                             --------->TOE2(3)    ------------>CBF          --------->YAB1                            --------->ANAC46 ------->YAB1                 <--------HAHB4                            <---------ANAC55(2) ---------CBF                 -------->ATHB1                     <---------YAB1   --------->ARR14(2) ----AHL20(2)                 --------->ATHB12            --------->YAB1--------->ANAC55(2) ->GT1--------->WOX13(1)     <---------ATHB12      --------->ZAT14      <---------ANAC46         <--- ----YAB1              <----------DOF2 <---------YAB1    <---------YAB1<---------TOE2(3)        <----   attgtaatcaatctcacataaacaactttgaatcattaattatcgttaagaactatactattatagtatcatttacgtaaaacgaatcccacttatagcc  24461500                                     <---------ARR14(2)     --------->GLK1(1)               --------->ARR14(2)    <---------ARR14(2)               ------->TEIL<-----------GT1    <---------ARR11(1)               <---------ARR11(1)    --------->ARR14(2)              <---------CCA1(2)    <-----------ARR10               <---------ARR14(1)    ------->TEIL                  <---------ANAC58   <---------CCA1(2)              <---------ANAC58   <---------GLK1(2)              <---------ANAC46                                       --------->ANAC58 -------DOF2               <---------WRKY12 ----------->TBP                              --------->ANAC58 -----DAG2      <----------DOF2<----------DOF2----------->TBP  ------>ZmHOX2a(1)     --------->AtMYB61   ttttcgaatctccatcggctcttacgaagtcaactttcgtatctctatataaaaccattcttctccttcttgttccctaaaccaagaccacaagaaaaaa  24461600                                                                            ---------->DOF2                                                                  ----------->RAV1(1)                                                                 --------->DEAR3(1)                                                                <---------LBD16                                                                --------->At4g35610                                                               --------->MYB52(1)            <-----------GT1              --------->LBD16      <---------WRKY38(1)       <---------AHL20(1)               <---------LBD16      ----------->HVH21       --------->AHL20(1)              <---------LBD16       --------->ATERF1(1)       <---------ARR11(3)             ------->TEIL          <-----------HVH21    --------->CCA1(2)       --------->ARR11(3)       <---------AtMYB61     <---------AtLEC2<------NtERF2    --------->AHL20(2)     <---------MYB46(3) <---------At4g35610<---------ATERF1(2)                <    <---------AHL20(2)   <---------MYB52(1)   --------->At4g35610--------->ATERF1(2)         <-------   acataaaaaaatattcacaaaatggccgatggttttggtgaaccgggaagctcaatgcatggagtcaccggcagagaacaaagctatgcattctctgtcg  24461700            <---------ANAC58         <---------ARR14(2)                           ------>MYB46(1)         --------->ARR14(2)                           ------>MYB83        <---------At4g35610                         --------->DEAR3(1)       <---------MYB46(3)                          --------->ANAC58     <---------MYB52(1)                       <---------ZAT18    --------->LBD16                         ------->PIF5    ------>NtERF2                           <-------PIF5                                        <----   --------->ANAC46                 <-----------GT1--------->ANAC46                         <--------  <---------LBD16         --------->At4g35610 --------->REM1(2)  ---------->DOF2            --------- ---------ARR14(2)     --------->At4g35610  --------->LBD16---------->DOF2            ------>ZmHOX2a(1) ----HVH21  <---------ANAC58      <-----------GT1  --------->ANAC58                   <----------DOF2   agtctccggcagttccttccgactcatcagcaaaattttctctccccgtggacaccgaacacaaagccaaagtcttcaaactcttatcctttgaagctcc  24461800                         <---------AGP1                                           --------->TOE2(3)                    <---------ANAC58                                             --------->YAB1         <----------DOF2 --------->ARR11(3)                                      <--------HAHB4        <---------HSFB2a(1)                                               ---------->ID1        --------->HSFB2a(1)                                     <---------At4g35610<---------YAB1        --------->HSFC1(2) ------>ZmHOX2a(2)                 <---------At4g35610 --------->ATHB12        <---------HSFC1(2)<---------GLK1(1)                  <---------ZAT2      <---------ICU4      --------->ARR11(3) <---------ARR11(3)                  --------->At4g35610<---------YAB1      <---------ARR11(3)<---------CCA1(2)                    --------->ZAT2     <---------ATHB12 -----ALFIN1        <---------ANAC58                  <----------DOF2------>ZmHOX2a(1) <---------ZAT6 -At4g35610         <---------AtLEC2      <---------ANAC58  <-----------RAV1(1) --------->ICU4------- >At4g35610         <---------ANAC46      <---------ANAC58<---------At4g35610 --------->ANAC46-------   acatatgagaactttccatcttgcttggatctcattcttcacttgcttcatttccactttcgctgctgctcctcttgtccccatcattagagataacctt  24461900                             --------->ALFIN1                                                      --                     --------->GLK1(1)                                                             --                     <---------GLK1(1)                                                             --                    --------->ARR14(2)                                                             --                    <---------ARR14(2)                         <---------ANAC58                    --                 <---------ANAC46                              <---------ANAC58        ------>ZmHOX2a(2)                 --------->ETT(1) <---------ANAC46 <-----------ARR10                  <---------GLK1(1)      --------->ANAC58       <---------REM1(1)     <---------ARR14(2)                 --------->GLK1(1)      --------->ANAC58       <-----------RAV1(1)   --------->ARR14(2)                --------->ARR11(3) -->TOE2(3)  --------->ARR11(3)   <---------ANAC58 --------->ARR11(3)                <---------ARR11(3) -->TOE1(3)  <---------ARR11(3)   <---------ANAC58 <---------ARR11(3)      <---------At4g35610   <---   aatctcacaagacaagatgtcggaaatgctggtgttgcttctgtctctggcagtatcttctctaggcttgttatgggagcagtttgtgatctccttgggc  24462000                                                                       --------->LBD16                                                                       <---------SPL7                                                                     --------->ATERF1(1)                                                                     <---------LBD16                                                                     <------NtERF2                                                                    ------>NtERF2                                                                   --------->TCP16(1)                                                                   <---------PCF2                                                                   --------->TCP20                                                                  --------->ATERF1(1)                                                                 <---------MYB46(3)                                                                <-----------RAV1(1)                                                                <---------DEAR3(1)                                                                <---------AtMYB61                                                                --------->ALFIN1                                                              <---------MYB46(3)                                                              --------->MYB52(2)                                        ------->GAMYB         <------MYB83                    <-----------HVH21  --------->MYB46(3)     <------MYB46(1)            <---------ANAC58           <------------AtMYB77  <---------AtMYB61 ------->O2 <---------ANAC58    <---------At4g35610          <---------DEAR3(1) ------->ANAC46     <-----------TGA1  ------>MYB46(1)       <---------MYB52(1) --------->ANAC58 ------->ANAC58    --------->ANAC46   ------>MYB83         <-------GAMYB<------NtERF2 ------->ANAC58    --------->bZIP60(2)-------->P          <---------ANAC58     --------->ANAC58 ------->bZIP60(2)------>ZmHOX2a(1) <---------ALFIN1      <---------ANAC58   <--------P ------ALFIN1<----------DOF2    --------->At4g35610    <----------DOF2<---------ANAC46        -------   cacgttatggctgtgctttcctcgtcatgctctctgctccaaccgtcttctccatgtctttcgttggtggtgccggagggtaagcattcttgtgaattgt  24462100  Previous    Next  AGI:  At5g60770.1    Description:  ATNRT2.4 (Arabidopsis thaliana high affinity nitrate transporter 2.4); nitrate transmembrane transporter. similar to ATNRT2:1 (Arabidopsis thaliana high affinity nitrate transporter 2.1), nitrate transmembrane transporter [Arabidopsis thaliana] (TAIR:AT1G08090.1); similar to ATNRT2.3 (Arabidopsis thaliana high affinity nitrate transporter 2.3), nitrate transmembrane transporter [Arabidopsis thaliana] (TAIR:AT5G60780.1); similar to ATNRT2.2 (Arabidopsis thaliana high-affinity nitrate transporter 2.2), nitrate transmembrane transporter [Arabidopsis thaliana] (TAIR:AT1G08100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16790.1) Range:  from: 24461622    to: 24464252    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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