Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   <---------ARR14(2)                 --------->ARR14(2)                <---------GLK1(1)                                                   --------->At4g35610                <---------CCA1(2)                                              <---------RAP2.6(2)         --------------->AtSPL3                                          <---------YAB1        <---------At4g35610        <---------ANAC55(2)                   <---------AHL20(2)        --------->At4g35610        --------->ANAC55(2)                --------->AHL20(1)        ------>NtERF2--------->At4g35610                              <---------AHL20(2)       ------------------>SPL14  <-----------GT1                      <---------AHL20(1)     <---------At4g35610       <-----------HVH21                      --------->AHL20(2)    <--------     --------->ZAT14 ------>ZmHOX2a(1)                             <---------AHL20(2)     --------->WOX13(1)     --------->At4g35610      --------->bZIP60(1)                  --------->AHL20(2)  <-----------HVH21 ->KAN4(2)   <-------TEIL   <---------ICU4    >>>>>>>>>>MYB80     --------->AHL20(2)<---------At4g35610 --TaMYB80--------->RAP2.6(2) <---------bZIP60(1)          --------->At4g35610--------->RAP2.6(3)   tcacttctgcagccgtacatatcctctgcatcatgtcacctattctcaaaccaaaaacatcagcaaaattaaaatattatttcggcttctgtcaatgaaa  24447100                                      <---------ANAC46                                   ------->MYC3                  <----------DOF2  <-------MYC3           --------->REM1(2)                 <---------DAG2    <-------MYC2 --------->GLK1(2)                 <---------------AGL15<---------ANAC58 <----------DOF2                 --------------->AGL15<---------ANAC58<---------ANAC58              <-----------GT1      ------->MYC2--------->GLK1(1)     ---------->DOF2           ------    ----------->GT1    ---------->ID1<-------TEIL     <---------ANAC58             --------->YAB1  <------ZmHOX2a(1)    <---------TOE2(3)       <---------GLK1(1)    <---------AHL20(2)         <----- -ATHB12--------->AHL20(2)   <-----------GT1<---------TOE2(3)       --------->AHL20(2)    <----------DOF2   cagaggatgtataaatataccttttgtggttttaccacatgcgtttaagaaatctggctttgtagagaaattaaaggcttcgttataatcttcttttctg  24447200                                                                                             <-------                                                                                       <---------ZAT2             --------->TOE2(3)                                                   --------->ARR14(2)          --------->AHL20(2)            <---------TOE2(3)                        --------->GLK1(2) ---------->DOF2                   <------ZmHOX2a(1)--------->ICU4    --------->YAB1   --------->ZAT2 --->HSFB2a(2)     <---------ARR11(3)   <---------TOE1(3)     --------->MYB52(1) <---------ARR14(2)-- ----HSFB2a(2)     --------->ARR11(3) ---------->DOF2       <---------MYB52(2)  <---------GLK1(2)  <-   aaacaaagacaataacataaacatcttcaatgctataggataaaggttaatgccattttgaaactaacacattggtaatgcagaatccgagctctctttt  24447300                              <---------RVE1(1)                             <---------KAN4(2)                          <-------TEIL                                  --------->LBD16       ------>ZmHOX2a(1) --------->ARR14(1)                            <------NtERF2--------->HSFC1(2)      --------->TOE2(3)  --------->CCA1(2)                            --------->LBD16 ---DOF2         <---------DEAR3(1)                                   ------>NtERF2 <---------HSFC1(2) ------->bZIP60(1)       --------->GLK1(2)                            <---------LBD16 --------bZIP60(1)    ----------->ARR10                              --------->DEAR3(1)  <---------CCA1(2)   gatgtcatcctcaaaaacttcggtgagattcgatattttgtcgaaaacgaattggttatagagacgattagccgcgggattatccaagcttctatcttct  24447400             <---------ANAC58                                    --------->LBD16             <---------ANAC58                                   --------->LBD16          <----------DOF2               --------->ANAC46        <---------LBD16                ------        <---------DAG2         --------->ANAC58                <---------LBD16       ------>ZmHOX2a(1)     <-----------GT1           --------->ANAC46                <---------ANAC46  <-----------GT1    <---------ATHB12           --------->ANAC58     <----------ID1           ------->TEIL     -------   tgacaaatcactctttcttgctgaagaatcaacacgataaacacgaagaacaatggaacaaaattccctggaaaatatgaatttctccttcccatccctg  24447500                                            =============HOX2a_HOX2a        --------->ANAC58                <------ZmHOX2a(2)        --------->ANAC46               --------->ARR11(3)                  <------ZmHOX2a(1)        --------->ANAC58         <---------ANAC58 ================================HOX2a_HOX2a  <----- --->LBD16                       <---------ANAC58 <------ZmHOX2a(2) <------------CBF           <----- -->LBD16                   <------------CBF<------ZmHOX2a(1)    ------------>CBF ---------->DOF2   -   aaaattttccaagaaaacaacgttgcaaagaattgtcttgagatcaggatggatcaaggagacattagacaattgaaggagacagaaagagagaattagg  24447600                           <---------------AGL15      <---------ARR14(2)                           <----------DOF2            --------->ARR14(2)                     <----------DOF2                  --------->ARR11(3)                   ---------->ID1                     ------->TEIL           ---------->ID1  --------------->AGL15     <---------CCA1(2)          <-----------GT1---------->ID1            <---------ANAC58      <------------------------ANAC81              <---------ANAC46 ----TOE2(3) <----------DOF2    <---------LBD16    <---------ANAC58               <------ZmHOX2a(1) ----TOE1(3)<------------------------ANAC81      <---------ANAC46  --------->ANAC58 -------->MYB52(2)<-----------GT1           <------------CBF       --------->ANAC58              ----   gtttgtttgttttttctttttttctttttctttttggggagagagagattgttgtgtatcttgagagtcaagaaatggatgagaggaaggcatggcgata  24447700                                  <---------At5g28300                           <---------AHL20(2)              --------->ANAC58   <-----------GT1            --------->CCA1(2)   --------->WRKY12           <----------ID1 --------->AHL20(2)       ---------->DOF2    <---------AHL20(2)      <------ZmHOX2a(1)<---------ARR11(3)                                                        <---    ------------------------>ANAC81   <---------MYB52(1)                          --------->ANAC58   <------ZmHOX2a(1)   <---------GLK1(2)    <----------DOF2            <---------GLK1(2)--------->YAB1 ----->CCA1(2)--------->ANAC58  ----------->HVH21         <-----------HVH21       --------->ANAC58   tatgaggaggaaagagacgaaaacagattttaatttgaccgtttgactttctctaactcgtgtcatggtaatagattcttcaccaaggaatcatactatg  24447800          <---------TOE1(3)          <---------TOE2(3)                                                              --------->ARR11(3)     <---------ZAT6                                                                      <---------ARR11(3)   <---------At5g28300      <---------TOE2(3)                       --------->ZAT18    ----------->ARR10  <-----------GT1       --------->YAB1  ----------->HVH21           <---------ZAT18  ---------->DOF2 ------AHL20(2)        <---------YAB1  <-----------HVH21<-----------GT1    <-----------HVH21   taatttacagttaaggctctgtattttgataatgtttctactgtgacctctatagttttgacatttttggtgcaatatgtcaaatagaaaagatttgttt  24447900                      >>>>>>>>>>>>>>>>>LFY                     <-----------GT1                --------->AHL20(1)                <---------AHL20(1)                              --------->YAB1                     --                --------->AHL20(2)                              <------ZmHOX2a(1)             -------                <---------AHL20(2)                          ---------->DOF2                   <------               --------->AHL20(2)                         <---------YAB1                      -------               <---------AHL20(2)                       <---------------AGL15                --------             --------->YAB1                             --------------->AGL15                <-------           <---------AHL20(2)                  --------->At4g35610                     --------->YAB1           --------->AHL20(2)                  <---------At4g35610             ----------->GT1<------   ttctgaaaaatataaaaataaatttaccaatgtgttctgaaggcaattcagctataaactataaaaggataatgaacaaattggtttattcatcaataaa  24448000  Previous    Next  AGI:  At5g60740.1    Description:  ABC transporter family protein. Identical to Putative white-brown complex homolog protein 29 (WBC29) [Arabidopsis Thaliana] (GB:Q9FF46); similar to ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT1G53390.1); similar to ATNAP12 (Arabidopsis thaliana non-intrinsic ABC protein 12) [Arabidopsis thaliana] (TAIR:AT2G37010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21882.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68920.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18176.1); contains InterPro domain ABC-2 type transporter (InterPro:IPR013525); contains Int Range:  from: 24443298    to: 24447495    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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