Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          --------------->AGL15                                        <---------------AGL15                                       ----------------->AGL2                                       <-----------------AGL3                                       <-----------------AGL2                                <-------                          <---------LBD16                                                    --------                          ------>ZmHOX2a(2)                                                 <--------                         <------ZmHOX2a(2)                                                  ---------                        --------->ARR14(2)                                               --------->ANAC46             --------->ANAC58         <---------ANAC46                                   --------->ANAC58      ---------->DOF2   <---------ARR14(2)                                               --------->ANAC58 >At4g35610  --------->ANAC58    <---------REM1(1)                    <---------AtLEC2 --------->ZAT6 -At4g35610--------->CCA1(2)--------->LBD16      ---------->DOF2     <-------TEIL    <-----------GT1   atgtgaatgaaagagacgcataaatcgatccggacatgtagcctatatatggaaagaggtttagaacaaggtgcatgtaacccaaattaacacgatatct  24439100                                        --------------->AtSPL8                                        <---------------AtSPL8                                        <---------------AtSPL3        -------->P                  ---------->DOF2       --------->MYB52(1)          <---------AHL20(2)      ------->GAMYB            <---------AHL20(2)      --------->WOX13(1)     --------->MYB46(3)        --------->AHL20(2)     <---------AHL20(2)     <---------MYB111(1)  <---------AHL20(2) --------->ANAC58     <---------MYB52(2)  --------->AHL20(2)  --------->ANAC46  --------->MYB46(3)   --------->ARR11(3)    --------->ANAC58         --------->YAB1 --ARR11(3)            <---------ARR11(3) <---------SPL7  --------->YAB1         --------->ANAC46 ->ARR11(3)         <---------TOE2(3)<---------TOE2(3)--------->AHL20(2)    --------->AGP1   -------- -GLK1(1)          ---------->DOF2 --------->AHL20(2)--------->AHL20(2)  --------->YAB1    ---------- >GLK1(1)--------->MYB46(3)   --------->AHL20(2)  --------->ICU4 <---------YAB1 <--------------------   ttgaacaactaaccactagattaaagattttataaaattaaagttgtacgcaaaaattaatcaacatatgaatgatcagaactacgaagcattgaaagta  24439200                                                       <---------ANAC46                                                       --------->ALFIN1                                                     <---------MYB46(3)       --------->ZAT6                               <---------AtMYB61    --------->ANAC46                                --------->ALFIN1 --->GT1                                            <-----------RAV1(1) >DOF2<---------ZAT14                   <-----------RAV1(2)<---------AtLEC2 -WRI1--------->ZAT14                   ========================RAV                    <------NtERF2   aaactcacaacactatgagggacattgaagggagagatagagccagggagagttgtggtgggcatggctaagatggagcagtaatcgtcgggactagacc  24439300                                       ----------->GT1                                       <---------MYB46(3)                                ---------->DOF2                               <------NtERF2                   --------->YAB1                              --------->LBD16            <------MYB46(1)                            <---------LBD16              <------MYB83                          --------->ARR14(2)            --------->MYB59        --------->MYB52(1)              <---------ZAT14--------->RAP2.6(2)      <------ZmHOX2a(1)    ----------->GT1              <---------At4g35610  --------->DAG2  <------ZmHOX2a(1)     <------ZmHOX2a(1)     <------ZmHOX2a(1)    <---------ARR14(2)    <-----------RAV1(2) --------->ICU4     >>>>>>>>>TBF1   agcgagaggaagatggagcagtgagacagagccggaaagagtggttaaaatcaggaggaaggtaatggtaatgaaggaggttaacagaagaagaatgaga  24439400                                                             <---------ANAC46                <----------DOF2                              <------MYB83        --------->ARR11(3)                                  <---------MYB46(3)        --------->AHL20(1)                                  *TSS        <---------AHL20(1)                                  --------->MYB46(2)        <---------ARR11(3)                              <---------MYB46(3)        --------->AHL20(2)                             <--------P       --------->CCA1(2)                              <-------GAMYB      <---------ARR11(3)                      --------->TOE1(2)      --------->ARR11(3)                     ------>ZmHOX2a(2)                          ---------->DOF2    <---------TOE2(3)                       <------ZmHOX2a(2)<------MYB46(1)---------->DOF2<---------At4g35610   catattgagatatattagctttggcttcaagatgaagaagagagcgatcgtgagagggttgtttggtgagggaagacgagaagcagttttcaaagctgat  24439500                                   <---------AHL20(1)                                   <---------AHL20(2)                                   --------->AHL20(2)                                   <---------ICU4                                   <--------ATHB1                                   --------->YAB1                                  --------->ICU4                                  <---------ATHB51                             ----------->GT1              <---------TOE2(3)  <-----------------AGL3          <------------CBF   <------MYB46(1)              --------->YAB1                         ----         --------->ATHB12    <------MYB83                ----------->TBP                       <-----        <---------MYB52(1)  <---------MYB46(3)           <---------YAB1                      --------       <-----------TGA1     --------->MYB55(2)         --------->AHL20(2)                    <-------       <-----------HVH21   <---------ANAC46            --------->YAB1                    <-----------GT1      --------->ANAC46     <---------MYB55(1)         <---------YAB1                    --------->AHL20(2)      ------->GAMYB     --------->ALFIN1           --------->AHL20(2)                <---------AHL20(2)     <------------AtMYB77<---------MYB46(3)        <---------AHL20(2)        <-----------GT1 --------     --------->MYB46(3) <---------AtMYB61      <----------DOF2      <-----------GT1<---------AHL20(2)   gctcttaaccgtcattgagatagagagtggtgggtaataattttgggacctttttaattataaaaacatttttcattttttacatatatttttaatatcc  24439600                                                                                     <---------ZAT18                                                                                     --------->ZAT18         <---------YAB1                                                            --------->At4g35610       <---------ICU4                                                              <---------At4g35610      <---------YAB1                   <------MYB83                        <---------YAB1      --------->ICU4           ---------->DOF2                           <---------ICU4    --------->YAB1          --------->ANAC58                             --------->YAB1          <---   <---------YAB1           --------->ANAC58 <-----------RAV1(1)     <---------AHL20(1)      <------- ----->LBD16        <---------MYB46(3)<---------TOE2(3)              <---------AHL20(2)      <------- ----LBD16          --------->MYB52(2)--------->MYB59                --------->AHL20(1)      -------- ->ARR11(3)         <-----------RAV1(1)<------MYB46(1)<---------AtMYB61 --------->ICU4      --------- --ARR14(2)       <----------DOF2--------->ICU4  <---------MYB46(3)  --------->AHL20(2)     <-------- ->ARR14(2)    ------->TEIL <---------ANAC46 <---------AtMYB61      --------->AHL20(2)    --------->YAB1   ggtttatgattattatggacctttgttgcgacgtaaagattaggtttttggtggtgatggttttaatccattaaattatgagtttagctcactaatcatt  24439700                                                                  <---------AHL20(2)                                                                  --------->AHL20(2)                                                                 <---------AHL20(1)                                                                 <---------AHL20(2)                                                                 --------->AHL20(1) ------AHL20(2)   ----------->GT1                                --------->AHL20(2) -HAHB4           --------->YAB1                             --------->AHL20(2) --ICU4   <------MYB46(1)                                <----------DOF2 ->YAB1   <------MYB83 <---------ANAC46       <----------DOF2<---------AHL20(2) >ICU4   <---------TOE2(3)        <----------DOF2       <---------DAG2 -ATHB12 --------->MYB59          <---------DAG2     <-----------GT1   ttatgaacaattaggttgaattgtaacttgtaagggctttttgtgaaactttattttacctttttaatttattttggccaaaatgaattgaataagcagt  24439800                                                                                    <---------AHL20(2)                                                                                   <---------YAB1                                                                                  <---------AHL20(2)                                                                             <---------AHL20(1)   ---                                    ----------->GT1                        >>>>>>>>>MYB98         ---                                   ----------->GT1                        <-----------GT1      ------                         --------->YAB1       <---------YAB1             <-----------GT1<---------AHL20(2)            ---------->DOF2      ---------->DOF2      ---------->DOF2   <---------AHL20(2) <---------   ttttcttcaaatttgaaagaacaattttcatatttgaaagttaaaattttcatttacaaagtgattactcaaattttaacatatttttattttatactaa  24439900                                                                                   --------->DEAR3(1)                                                                                  <------NtERF2                                                                                  --------->ATERF1(1)                                                                                 <---------ATERF1(1)                                                                                 ------>NtERF2                                                                                --------->ARR14(2)                                                                                <---------ARR14(2)                                                                               --------->ATERF1(1)                                                                               <---------ZAT2                                                                               <------NtERF2                                                                               --------->ZAT2                                                                              <---------DEAR3(2)                                                                              <---------ATERF1(1)                                                                              <---------RAP2.3(1)                                                                              ------>NtERF2                                                                             <---------ATERF1(2)                                                                             --------->ATERF1(2)                                                                             --------->DEAR3(1)                                      <---------AHL20(2)                     <---------DEAR3(1)                                      --------->AHL20(2)                    <---------LBD16                                   --------->AHL20(1)                       --------->RAP2.3(1)                                   --------->AHL20(2)                       --------->ATERF1(1)                                   <---------AHL20(2)                       <------NtERF2                     --------->AHL20(2)                                     --------->DEAR4(2)                     <---------AHL20(2)                                    ------>NtERF2                     --------->AHL20(1)<---------AHL20(2)                  <---------RAP2.3(1)                    --------->AHL20(2)<---------AHL20(1)     *TSS          <---------ATERF1(1)          <----------ID1          <---------AHL20(2)   --------->ANAC58   <---------DEAR3(1)        ---------->DOF2 <---------AHL20(2)             --------->ANAC46   --------->DEAR3(1) -------->GT1       <---------AHL20(2)--------->AHL20(1)  ---------->DOF2--------->ATERF1(1) ------>YAB1      --------->YAB1--------->YAB1------>ZmHOX2a(1)         <-----------HVH21 --->YAB1 ----------->GT1  <---------YAB1    --------->TOE2(3)         <---------ANAC58 ------AGL15    --------->AHL20(2)--------->AHL20(2)   --------->ANAC58<---------ANAC58             -   tagtaaaaaaaaaagaaaaaaaataatttatgaaaaataatttatttcctaaaaccctcgcaaagcccttcttccgtcgccggctccgtccaaaacagag  24440000  Previous    Next  AGI:  At5g60720.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G39690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21880.1); contains InterPro domain Protein of unknown function DUF547 (InterPro:IPR006869) Range:  from: 24435455    to: 24439460    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g60730.1    Description:  anion-transporting ATPase family protein. similar to anion-transporting ATPase family protein [Arabidopsis thaliana] (TAIR:AT3G10350.1); similar to unknown [Populus trichocarpa] (GB:ABK95489.1); contains InterPro domain Anion-transporting ATPase; (InterPro:IPR003348) Range:  from: 24439961    to: 24442718    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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