Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           ------>MYB83         ------>MYB46(1)       --------->MYB46(3)                                                                --------->KAN4(1)       --------->AtMYB61                                                                 <---------KAN4(1)       <---------MYB46(2)                                                                --------->HSFB2a(1)       <---------MYB111(1)                                                               <---------HSFB2a(1)     ------->TEIL                                                                        --------->HSFC1(2)    <-----------GT1                             <---------At4g35610                      <---------HSFC1(2) <---------------AtSPL8                  <-----------ARR10                              <---------KAN4(2) --------------->AtSPL8                  --------->GLK1(2)                        ------>ZmHOX2a(2) ---->MYB46(3)                           --------->ARR11(3)                     <---------ARR14(2) >MYB46(1)                               <---------ARR11(3)                     --------->ARR14(2) >MYB83<---------MYB59                   --------->ARR14(2)                  --------->LBD16 ---->RAV1(1)                            <---------ARR14(2)                 <---------LBD16 >DEAR3(2)              --------->ATHB12<---------CCA1(2)<---------ANAC46  <---------LBD16--------->KAN4(2) >MYB46(3)   <----------DOF2        <---------ANAC46 <---------GLK1(1)    --------->MYB52(1) -MYB55(2)  <---------DAG2  ----------->GT1     --------->At4g35610 <---------ARR14(2)  ------->TEIL   aaatatgtaccaaaccttttgagaaatgaatggcaatttcgagtatcttcagaagaattcagtggaagcgtaaccataccgggatcgacgaatgttctct  24387200                               <---------ATHB12                               --------->MYB46(3)                              ------>MYB83                                                  ------>NtERF2                              ------>MYB46(1)                                               ---------                         <---------ARR14(2)                                                --------->DEAR3(1)                         --------->GLK1(2)           =====================================HOX2a_HOX2a                         --------->ARR14(2)          <------ZmHOX2a(2)                     --------->ANAC58                   ------->GAMYB             <------NtERF2              <---------MYB52(1) --------->ANAC46                  <---------MYB55(2)      <---------ZAT2               --------->LBD16     --------->ANAC58                  --------->MYB46(3)      <---------At4g35610        <---------LBD16      <---------LBD16             --------->ANAC46 -------->P  --------->ZAT2           --------->GLK1(2)     <---------ATERF1(1)             --------->ANAC55(1)         <---------ATERF1(1)       --------->ARR14(2)    ------>ZmHOX2a(1)             --------->ANAC55(2)       <---------LBD16     ----------->RAV1(1)          <---------ALFIN1             <---------ANAC55(2)--------->YAB1   <---------ATHB12  <---------ARR14(2) ------>ZmHOX2a(1)   --------->ARR14(2)    <-----------ARR10--------->At4g35610 ------->GAMYB          <---------ALFIN1   <---------ARR14(2)   <---------ARR14(1)<------NtERF2   --------->MYB46(3)       ------>ZmHOX2a(1)  <---------MYB52(1)--------->MYB52(1)--------->ANAC46  ----------->RAV1(1)   <----------DOF2       <   cgccgtttcttcaacacataaccaccgaatccaaccatactcgcggctgcaatcgatccaacaacagcgattccggttttctttcctcctcctccgccat  24387300              --------->HSFC1(2)                                     <---------MYB52(1)              <---------HSFC1(2)                                    --------->LBD16                 -              --------->HSFB2a(1)                                  --------->ANAC55(2)             <-              <---------HSFB2a(1)                                  <---------ANAC58                --        ------>MYB46(1)                                  --------->ATHB12                          --        <---------LBD16                                 <---------YAB1 --------->MYB52(2)         <--        ------>MYB83                          <---------ZAT18      <---------ANAC46               ---      --------->AtMYB61       <-----------HVH21         <------ZmHOX2a(2)            <---------ANAC46   <---------ALFIN1         --------->LBD16   --------->ZAT14      <---------ANAC58--------->MYB52(1)  --------->MYB46(3)      <-----------------AGL1       --------->ARR11(3)         ----------->TGA1<-- >LBD16--------->MYB52(1)------>NtERF2   <---------YAB1<---------ARR11(3)         ----------->HVH21<- -----------GT1         --------->DEAR3(1)    <---------ZAT14      <---------ANAC55(2)       --------   tttcaccacctacggatgcttcttcgcctcccggtctggtactatcagtgtagttgagatcattggattccgtaagttgagacgatgacggataatcgta  24387400                                               <------NtERF2                                            <------NtERF2                                            <---------At4g35610 -------->TOE2(3)                         <---------RAP2.3(2) -------HAHB4                             <---------RAP2.6(2)                                      -- ------->ATHB12                          <---------LBD16                                         <--- ------->YAB1                            --------->RAP2.6(3)          --------->LBD16            <--- -------ATHB12                         <---------WOX13(1)             ----------->GT1            ---- ------>ICU4                         --------->ATHB12                <---------DEAR3(1)   <---------GLK1(1) -------YAB1<---------DEAR3(1)      <---------YAB1 <----------ID1   <---------LBD16  <-------GAMYB -- --------ICU4 <------NtERF2        <-----------------AGL1         ------->GAMYB      --------->At4g35610 ->YAB1   <-----------HVH21   <XXXXXXXXXXXXXXXXXXXXMIR832-5P     --------->MYB46(3)  <---------At4g35610   atcattagacatcgtcggagatggagacatttcggtttctgattgcggcagagacgacgaatgctcaatcgccggtgaaatttcttcagttgaaatctca  24387500          ---------->DOF2    ----------------->AGL3 --------->SPL7                                --------->YAB1 --------->HVH21                               <---------ICU4 ------LBD16             --------->ARR14(2)   <---------ATHB12 ------At4g35610         <---------ARR14(2)   --------->ICU4 ----->At4g35610    ----------->RAV1(1)     --------->YAB1      --------->At4g35610 ------->LBD16     --------->REM1(1)  <---------ARR11(3)        <---------At4g35610                <-   ccggacaccattaaaagagctacaccagataccattacaagagctacaatgatgaagtcgaacttcatctccaaaattcaaacctctctctctctctctc  24387600                                                                                                -----                                                                                                <----                                                                                         --------->TGA2(2)                                                                                        <-----------TGA1                                                                                        <-----------HVH21                                                                                       <---------bZIP60(1)                                                                                       <---------O2                                                                                       <---------TGA1a                                                                                       --------->O2                                                                                       --------->bZIP60(2)                                                                                       --------->bZIP60(1)                                                                                       <<<<<<<<<<AtbZIP1                                                                                       --------->ANAC46                                                                                       --------->TGA1a                                                                                       --------->ANAC58                               --------->ANAC58                                        --------->ANAC58                       <---------MYB46(3)                                      <---------ARR14(2)                      <--------P                                --------->TOE1(2) --------->ANAC58                     <-------GAMYB                        <---------------AtSPL8  --------->ANAC58                    <---------MYB46(3)               <---------AHL20(2)        --------->ARR14(2)            <---------DAG2     --------->ANAC58     --------->AHL20(2)<---------YAB1  ------>NtERF2            <----------DOF2   *TSS                  <-----------TBP----------->HVH21 <---------ALFIN1 ---------DOF2     <---------YAB1             ----------->GT1   --------->TOE2(2) --------->ANAC46   tctttttcttctctctttttgatggttgatgacactcaagtagagagatggtgattttatagggtacctatgacgaatggggattcgccacgtcagaagt  24387700                                    --------------->AGL15                                    <---------------AGL15                                 <-----------GT1 ------>ZmHOX2a(1)                                <-----------GT1 --------->TOE1(2)                         <------------CBF      ------>ZmHOX2a(2)                        --------->ATHB12      <------ZmHOX2a(2)                         <---------TOE2(3)                        <---------AHL20(2)   <---------ARR14(2)                <-----------GT1                       <---------AHL20(1)    <---------ARR11(3)              <-----------HVH21    ---                       --------->AHL20(1)    --------->ARR11(3)         ------>NtERF2  ---------->DOF2                       --------->AHL20(2)    --------->ARR14(2)   <----------DOF2   ------>MYB83 <--- ---->ALFIN1           <---------AHL20(2)---------->DOF2         <---------ANAC58   ------>MYB46(1)-- -----ZAT6      --------->At4g35610----------------->AGL3        <---------ANAC58 <---------MYB111(1)   gttagaagctagagcatgaactgaatttattgattttcccacttaaagatcctatgagtaaacaattgctttggcacctagtcacctactaaagttatgc  24387800                             <---------AHL20(2)                   <------ZmHOX2a(2)                                           --------->SPL7                   --------->GLK1(1)                                        --------->YAB1           <----------DOF2  <---------AHL20(2)                            --------->GLK1(2)         <     <---------WRKY12       --------->AHL20(2)                           <---------GLK1(2)         --     <---------WRKY38(1)    <---------AHL20(1)                        --------->YAB1          <------    --------->WRKY18(1)     --------->AHL20(1)                       <---------YAB1       --------->MYB46(3)   --------->At5g28300     --------->AHL20(2)                      <---------ICU4       <-----------GT1   <-----------HVH21------>ZmHOX2a(2)                              --------->YAB1     <---------MYB52(2)  ------->GAMYB   <---------ARR14(2)                              --------->ICU4--------->DAG2<------ -------->HVH21   --------->ARR14(2)                              <---------ATHB12   --------->ANAC58 ------MYB59      <---------ARR11(3)                        ----------->GT1<-----------------------TaNAC69(2) ------->MYB52(1) --------->ARR11(3)   <-----------------AGL3   --------->WOX13(1)   --------->ANAC58   ctaacggtcaatgctttggggatctcaaaattaatttttggtctataaatggagcatatgaaatgtcaattatcagaatcgtaaggcaagtaaccacttt  24387900                                              --------->MYB52(1)                                          <---------------AGL15                                          --------------->AGL15                                          --------->WOX13(1)                                  <---------ANAC55(2)                               <---------RVE1(1)  <---------ICU4                  --------->ANAC55(2)                               <---------CCA1(1) --------->ICU4                   <---------ANAC46                                 <---------ARR11(3) ---------TOE2(3)               <-----------GT1                       <---------ARR14(2) ------->YAB1  --------->AHL20(2) <---------ANAC58                    --------->ARR14(2)     <------- ----DOF2      <---------AHL20(1) <---------ANAC58  ---------->DOF2  <---------CCA1(2)  <---------AHL20(2) ---DAG2       <---------AHL20(2) <---------ANAC55(1)      ------>ZmHOX2a(1)       --------->ARR11(3)   ataatgttgacgcttattttatttgtattgtgagttacttgtttcaattaacagaaaagtcctataaggccatatccatttgtgagatattttaaaaatt  24388000                                                                --------->ARR14(2)                                                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                <---------ARR14(2)                                                              <xxxxxxxxxxxxxxxsmallRNA(si3)                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                         --------->AHL20(1)              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                         --------->AHL20(2)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                         <---------AHL20(2)         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                     <---------AHL20(2)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                    <---------AHL20(1)              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                    --------->AHL20(1)             --------->AHL20(2)                   <---------AHL20(2)              --------->YAB1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                 --------->AHL20(2)               <---------ATHB12                 <---------AHL20(2)     <-----------GT1<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)               --------->AHL20(2)   <---------AHL20(2) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)               <---------AHL20(2)   --------->AHL20(2) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)             --------->AHL20(2)    --------->AHL20(2)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)            --------->AHL20(1)  --------->ATHB12  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)            <---------AHL20(1) <---------YAB1     <---------ATHB51           --------->AHL20(2)--------->YAB1      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)        xxxxxxxx         --------->AHL20(2) <---------YAB1    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)          --------- --ICU4--------->AHL20(2)<---------AHL20(1)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)    xxxxxxxxxxxxxxx   tctcaaaaaaaaaatatatatatatattttattatgatttaatttctgtccaattataaacacacatatacacatagtttctcagagaaactattctcaa  24388100  Previous    Next  AGI:  At5g60630.1    Description:  unknown protein Range:  from: 24386876    to: 24387630    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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