Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               <---------ZAT14                                                                             --------->ZAT14                                                                             <---------ZAT18  -------                                                 --------->GLK1(2)        ------>ZmHOX2a(1)  <-------                                               <---------AHL20(2)     --------->ARR11(3) <---------AHL20(2)      <---------ZAT18                   ----------->GT1            --------->AHL20(2)    --------->AHL20(2) -------ATHB12                          <---------ZAT6             <---------AHL20(2)<---------AHL20(2) -------GT1                        <----------DOF2                <---------ATHB12----------->GT1   <   accatttgtgcattcgaacttagaatagtagaagagtctttagagttaaataatctggtccaaaaccaataaaatcctgtgcagaagttaattttttgat  24347500                                        --------->AHL20(2)                                   <---------AHL20(1)                                  --------->YAB1                                ------>MYB83                                             <-----------                                ------>MYB46(1)                                         ---------->DOF2                                --------->MYB52(1)                                <--------ATHB1                              <---------MYB59<-----------GT1                      <---------ICU4   --------->ATHB51           <---------MYB52(2)                                  --------->ATHB51   --------->AHL20(2)         <---------MYB46(2)                                  <---------AHL20(2)  <---------MYB52(1)          <---------MYB111(1)                                 --------->AHL20(2)  <---------YAB1             <---------ANAC55(2)        <-----------GT1          --------->ICU4  --------->ICU4            ------->TEIL<---------AHL20(2)                       <---------YAB1 -->YAB1<---------YAB1  <---------------AtSPL8        --------->AHL20(2)       --------->YAB1 --YAB1<-----------GT1  --------------->AtSPL8        <---------AHL20(2)     <---------ARR11(3) ---------ICU4          <---------------AtSPL3  <----------DOF2              --------->ARR11(3)   aaccattattttcatttttcagtgtttaagtacctaacatatttttttatctttatttaaactaaacaaatttgagcaagataataatttgaaagtactt  24347600                                                                                               <-----                                                                                              ------>ZmHOX2a(2)                                                                                             <------ZmHOX2a(2)                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                                           <---------CCA1(2)                                                                                           <---------ARR14(1)                                                                                          --------->LBD16                                                                                        <---------LBD16                                                                                      <-----------GT1    <----------ID1                                                                 --------->TOE2(3)    ----------->GT1                                               <-----------GT1--------->ARR11(3)   ----------->GT1                             <----------ID1  <---------ARR11(3)<---------ARR11(3)   <---------TOE2(3)                  --------->At5g28300      --------->ARR11(3)--------->AHL20(1)  --------->DAG2          --------------------->WRI1    ----------->GT1          <-----------ARR10 ---------->DOF2      <----------DOF2----------->GT1   --------->DAG2           --------->RVE1(1) ----AtSPL8--------->AHL20(2)       --------->ZAT6    ---------->DOF2           --------->CCA1(1)   agataaaggaaaaaaaaatatggcctttcttagttcttacagtaaaaaaaaaacaaaaaagtgaatatatactaattttgaaatatcttaaccggatcta  24347700    <---------ANAC55(2)    --------->ANAC55(2) ----HSFB2a(2) >AGP1 >ARR14(2)                 --------->DAG2      <-----------GT1                      --------->YAB1 -AGP1                    ---------->DOF2     <---------ATHB12                    <---------ARR11(1) -ARR11(1)             --------->YAB1         --------->MYB46(3)                 <---------CCA1(2) ---ARR10         <---------ATHB12          --------->YAB1                     --------->RAP2.6(2) -ARR14(2)     <---------AHL20(2)       --------->ZAT6                       ------>MYB83 -ARR11(3)    --------->AHL20(2)      --------->YAB1         <---------ALFIN1------>MYB46(1) >ARR11(3)<---------AHL20(2)       --------->YAB1        <-----------GT1<-----------GT1   gacaatacatatttgattaaatcaagaataaagtcattaatcacactaatcacccattttctccctccccctaaaaaccagccgtatcatatgctcattc  24347800                 ----------->GT1                 <----------ID1                     <---------DAG2               ---------->DOF2                      <----------DOF2          <---------------AGL15                  <-----------GT1                        *TSS          --------------->AGL15        <----------DOF2     <-------TEIL               ---------->DOF2   catttgcattccctccaaaaagaaaaaaaaaaacttcattccttttgtttataactttatattcattcattcacttacaacaaaaccaaaaaccccaaac  24347900                                                                                  <---------ARR11(3)                                                                                  --------->ARR11(3)                                                                                  --------->ARR14(2)                                                                                  <---------ARR14(2)                                                                             --------->ANAC46                                                                        --------->GLK1(1)      <-----------GT1                            --------->YAB1  --------->ALFIN1<---------CCA1(2)   <---------GLK1(2)                    --------->LBD16--------->ANAC46 <---------GLK1(1)    <-------   ttcttgattctcccctccgataaccaaaaaatccctattttccgagatgaataatacacgagaagaagtaggggaattcactcaaatcttcaacgcttta  24348000                                                                                                   --                                                                                                   --                                                                                                <----                                                                                                -----                                                                                              -------                                                                                              -------                                                                                              -------                                                                                         --------->ANAC58                                                                                         --------->ANAC58                                                                                        <-------TEIL                                                                                     <---------HSFB2a(1)                                                                                     --------->HSFC1(2)                                                                                     <---------DEAR3(2)                                      <---------DEAR3(1)                             --------->HSFB2a(1)                                     <------NtERF2                                   <------MYB46(1)                        ---------->DOF2<---------DEAR3(2)                            <---------HSFC1(2)                 <---------AHL20(2) <-----------HVH21               <---------ICU4   <------MYB83  --                 --------->AHL20(2)--------->ANAC46                <---------YAB1   <---------TOE2(2)           <------ZmHOX2a(1)     --------->ANAC46                --------->YAB1     <---------TOE1(2) ---DOF2  ----------->GT1   --------->ARR11(3)                <----------DOF2      <---------MYB52(1)   atgagtcttatgaggaaatttatattcaaagttctacgcgtcggtccaatccctactaacatttctttcatcatggatggaaaccgtaggttcgccaaga  24348100                                                      --------->AHL20(1)                                                      <---------AHL20(2)                                                      --------->AHL20(2)                                                      --------->ARR11(3)                      <------                                                      <---------ARR11(3)                  --------->SPL7     --------->YAB1                                   <---------AHL20(1)               <---------ANAC46 ------->ANAC58                                --------->LBD16                         <---------ANAC58 ------->ANAC58                 <---------ZAT2 <-----------HVH21                     ------->TEIL --- -----ARR14(2)                  <---------At4g35610  --------->AHL20(2)            <---------SPL7 --- ---->ARR14(2)                  --------->ZAT2--------->ANAC46                     <---------ZAT14--- -->ANAC58              <------ZmHOX2a(1)  --------->ARR14(2)                     <---------REM1(1) ---->ARR10            --------->ANAC58    <---------ARR14(2)                   <------MYB83<-------- -->ANAC58             --------->ANAC58   <---------CCA1(2)                     <------MYB46(1) <---- ------->ANAC46    --------->ANAC46       <---------GLK1(1)            ---------->DOF2 <---------ANAC58   aacgcaatcttgaaggcctagacgcaggacacagagctggtttcatatccgtcaaatatattcttcaatactgcaaagagattggtgtaccgtatgtcac  24348200   --------->ANAC46                            --------->TGA1a     <---------ANAC58   --------->ANAC58                            --------->O2  ------>ZmHOX2a(2)   --------->ANAC58                            <---------TGA1a     <---------ANAC58  <-----------------AG                         <---------O2<---------AGP1                     ------- -----GT1 <------MYB83                         =====================================bZIP_DOF <------ZmHOX2a(2) ------>ANAC46                    --------->At4g35610      ------->TEIL          --------->ZAT2 ------>ANAC58                   <---------ARR14(2)     <---------WOX13(1)       <---------ZAT2 ------>ANAC58                   --------->ARR14(2)  ----------->HVH21   ---------->DOF2 <------ZmHOX2a(2) ---HVH21 <------MYB46(1)       ====================================HOX2a_HOX2a  --------->At4g35610 -----ALFIN1                    <------ZmHOX2a(1)--------->ALFIN1<---------YAB1  <---------At4g35610   actctacgcatttggtatggacaatttcaagagaggacctgaagaagtcaagtgtgtgatggatctaatgcttgagaaagtcgagctcacgatcgatcaa  24348300                                        <------NtERF2                                       --------->LBD16                                       ------>NtERF2                                      --------->ATERF1(2)                                 <----------DOF2                                <---------ICU4                              --------->GLK1(2)                                 ---------->DOF2                             --------->YAB1                                  ----------->RAV1(1)                    <---------ANAC58  <---------ATERF1(2)                   <---------ETT(1)                    <---------ANAC58  <---------DEAR3(1)                    ----------->HVH21      <-      --------->LBD16       --------->KAN4(1)                           --------->At4g35610       ---    <-----------RAV1(2)    <---------KAN4(2)                            <---------At4g35610      <---  <-----------HVH21 <---------ANAC46 <---------LBD16 --------->TOE2(3)  --------->ZAT2         ------ --->DOF2       ------->TEIL<---------KAN4(1)       ----------->GT1     <---------ZAT2         <-----   gctgtatcagggaatatgaacggcgtgagaataatctttgccggcgatttgaattcgttaaacgagcgttttagagctgcgacaaagaaactgatggagc  24348400  Previous    Next  AGI:  At5g60510.1    Description:  undecaprenyl pyrophosphate synthetase family protein / UPP synthetase family protein. Identical to Dehydrodolichyl diphosphate synthase 8 [Arabidopsis Thaliana] (GB:Q8LAR7;GB:Q9FKJ6); similar to undecaprenyl pyrophosphate synthetase family protein / UPP synthetase family protein [Arabidopsis thaliana] (TAIR:AT5G60500.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61413.1); contains InterPro domain Di-trans-poly-cis-decaprenylcistransferase; (InterPro:IPR001441) Range:  from: 24347888    to: 24348994    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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