Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              <--------                                                                                        <---------ANAC58                                                                                        <---------ANAC46                                                                                        <---------ANAC58                                                                                        <---------ANAC55(1)        ----------->GT1     <---------MYB59                                             <---------ANAC55(2)     ---------->DOF2      --------->ARR11(3)                                            --------->ANAC55(2) -->MYB52(1)              <---------ARR11(3)                                        <----------DOF2   agagaacaaaaggaaaatagaagaaatagaccttacaaccatttttgtttatgtcattccattcgcacttacaagagtagacgagtctttacgtgtttct  24345600              --------->YAB1             <---------YAB1            --------->AHL20(2)           <---------ICU4           --------->YAB1                                                       <---------AHL20(2)          <---------YAB1                                                <---------ANAC46        <--------HAHB4                                                  <---------ANAC58        --------->YAB1                      ---------->DOF2             <---------ANAC58 --------->TOE2(3)       <---------ATHB12               ----------->GT1             --------->ANAC55(2)   --------->REM1(1)       <---------YAB1                <---------TOE2(3)           <---------TOE2(3)<---------YAB1 -CCA1(2) --------->ICU4       --------->AHL20(2)               <-----------GT1--------->ICU4   tctaagcctataattataatcaaacaaaacaaaaaaaatgaggtaaaaaagcctccttgaagaattttacgttttcttgtatttattcttacatcaaaaa  24345700                                                                                ------>MYB46(1)           <---------ARR14(2)                                                   ------>MYB83           --------->ARR14(2)                                              <-----------GT1     <---------ZAT18                           --------->ZAT6           --------------->AtSPL8     --     --------->ZAT18                 --------->LBD16            <---------AHL20(2)             ------     <-------TEIL                  <---------LBD16              --------->AHL20(2)           -------- <---------------AtSPL8--------->AHL20(2)     --------->ZAT14  --------->AHL20(2)          <---------LBD16   caagaagtacacatatacactaatataaaatgtcttaaccggagacattacactaatcggagaaattaaaatgttttgtaccaaatgacattaaccggag  24345800                                                           <-----------GT1                                                         <-----------GT1              --------->YAB1     <---------YAB1                --------->ZAT6--------->YAB1                     <---------ARR11(1) --------->GT1           ---------->DOF2        <---------ATHB12                   <---------CCA1(2) ----->HVH21         ---------->DOF2       --------->TOE2(3)                     --------->RAP2.6(2) ->LBD16 <---------AHL20(2)----------->GT1----------------->AGL2               --------->At4g35610   acagtttatatttgattaaaccagaaagaaagtttaaacactaatccctaatcagcaattttctcccttcccctaaaaatcagccgtatcatatgctcat  24345900                        ----------->GT1                             <----------ID1                  <                      ---------->DOF2                       ----------->RAV1(1)                     <                 ---------->DOF2                         --------->ANAC58          *TSS        <-----            ----------->RAV1(1)                          --------->ANAC46         ---------->DOF2   -            <---------ALFIN1                             --------->ANAC58     <----------ID1   ------   tccatttgcattccccacagaaagaaaagaaaaacttcattctcttgtttatatttcactcgcaacaaaaaaaacaaaaaaaaacaaagtgtgttcttaa  24346000                                                                         --------->ARR11(3)                                                                         <---------ARR14(2)                                                                         --------->ARR14(2)                                                                         <---------ARR11(3)                                                                         <---------ARR11(1)                                                                        <---------CCA1(2)                                                                      --------->YAB1                                                                     <---------ATHB12                                                                <<<<<<<<<GATA-3         --------->YAB1                                         <<<<<<<<<GATA-1 ---------ARR11(3)                                              <<<<<<<<<GATA-4 -----------GT1                                                 <<<<<<<<<GATA-2 ----AHL20(2)                                                  ------->TEIL -------->ARR11(3)                                             --------->ARR14(2)                 --- --->AHL20(2)      ---------->DOF2--------->LBD16         --------->At4g35610       <----------DOF2 <   attatcttctctgataaccaaaaaagccctattttccgagatgaataccctagaagaagtagatgaatccactcatatcttcaacgctttgatgagtcta  24346100                                                                               <-------TEIL                                                                             <---------ARR14(2)                                                                             --------->ARR14(2)                              <---------DEAR3(2)                            --------->HSFB2a(1)                             <---------DEAR3(1)                             <---------HSFB2a(1)  <------ZmHOX2a(1)        <-----------HVH21                               <---------TOE2(2)     <--- ----------->GT1          <---------ANAC58                 <---------ICU4  <---------TOE1(2)    ----- ------>ICU4              <---------ANAC58                <---------YAB1  <-----------RAV1(2)  <<<<<< ---------TOE2(3) --------->GLK1(1)                     --------->YAB1   --------->LBD16       <<<<<<   atgaggaaatttttgttcagagttctatgcgtcggtccaatccctactaacatttcattcatcatggatggaaaccgcaggttcgctaagaaacacaatc  24346200                                                                                            <--------                                                                                       <---------ALFIN1                                                                                  --------->ANAC58                                                                                  --------->ANAC55(2)                                                                                  --------->ANAC58                                                                                  --------->ANAC46                                                                                 ------->TEIL                                                                                 <-------TEIL                                                                                 --------->SPL7                                                                               <---------SPL7                                                                              <---------ANAC58  <<<<<                                                                              <---------ANAC46 ------                                             --------->ARR11(3)               <---------ANAC58 <-----                                             <---------AHL20(1)              <---------------AtSPL3                                             <---------ARR11(3)              --------------->AtSPL8 -                                             --------->AHL20(1)             ------->TEIL --------->ANAC58                                  --------->ARR14(2)                      <---------SPL7 --------->ANAC58                                  <---------ARR14(2)                      <---------ZAT14--------->ANAC46                                 <---------CCA1(2)                       <---------REM1(1) --------->ZAT14 ------YAB1            <---------At4g35610   <---------AHL20(2)         <---------------AtSPL3------- ---->TOE2(3)         <---------AGP1         --------->AHL20(2)        <------MYB46(1) --------->ZAT6 <<<ARR1       <------ZmHOX2a(1) <---------GLK1(1)                     <------MYB83<-----------HVH21- <<<ARR2   <-------TEIL<---------ZAT2 --------->LBD16         ---------->DOF2--------------->AtSPL3<-   ttataggcctagatgcaggacatagagctggtttcatatccgtgaaatatattcttcaatactgcaaagagattggtgtaccgtacgtcacactccacgc  24346300      ----------->GT1 <------MYB46(1)                      =====================================bZIP_DOF <------MYB83                         --------->O2  ------>ZmHOX2a(2) -ALFIN1                              <---------O2<---------AGP1 <<<CAMTA3                            --------->TGA1a     <---------ANAC58 ->MYC3                               <---------TGA1a     <---------ANAC58 --MYC3                  --------->At4g35610      ------->TEIL                       ---------->DOF2 -------->MYB46(2)      <---------ARR14(2)     <---------WOX13(1)                   <------ZmHOX2a(2) -->ANAC46              --------->ARR14(2)  ----------->HVH21   ---------->DOF2 <------ZmHOX2a(2)---- -------->MYB59        <------ZmHOX2a(1)--------->ALFIN1<---------YAB1  <---------ZAT2         <----- --------MYB55(1)      ====================================HOX2a_HOX2a  --------->ZAT2       <-------   gtttggtatggataatttcaagagaggacctgaagaagtcaagtgtgtgatggatctaatgcttgagaaagtcgagctcgcgatcgatcaagctgtatca  24346400                               <---------MYB52(1)                              --------->LBD16                             <---------DEAR3(1)                             <---------ATERF1(2)                        <----------DOF2                       <---------ICU4                     --------->GLK1(2)      --------->TOE2(3)          ---------->DOF2          =====                    --------->YAB1        <-------TEIL              ----------->RAV1(1)         =====           <---------ANAC58  --------->ATERF1(2)                   <---------ETT(1)             <----           <---------ANAC58  <---------DREB2C(2)                   ----------->HVH21      <---------LBD16       ------->TEIL--------->KAN4(1)    <---------GLK1(2)      <---------At4g35610       --------->MYB52(1) ----->LBD16       <---------KAN4(1)    --------->ARR14(2)     --------->ZAT2           <---------SPL7 ------RAV1(2)    <---------KAN4(2)     <---------ARR14(2)     <---------ZAT2         --------->At4g35610 ----HVH21 <---------ANAC46 <---------LBD16----------->GT1     --------->At4g35610    <---------At4g35610   gggaatatgaacggcgtgagaataatctttgccggtgatttggattcgttaaacgagcattttagagctgcgacaaagaaactgatggagcttacggagg  24346500  Previous    Next  AGI:  At5g60500.1    Description:  undecaprenyl pyrophosphate synthetase family protein / UPP synthetase family protein. Identical to Dehydrodolichyl diphosphate synthase 7 [Arabidopsis Thaliana] (GB:Q8LED0;GB:Q9FKJ7); similar to undecaprenyl pyrophosphate synthetase family protein / UPP synthetase family protein [Arabidopsis thaliana] (TAIR:AT5G60510.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61413.1); contains InterPro domain Di-trans-poly-cis-decaprenylcistransferase; (InterPro:IPR001441) Range:  from: 24345983    to: 24347011    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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