Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              --------->ANAC58                                                               ------>ZmHOX2a(2)                                                      --------->GLK1(2)     --------->ANAC46                                                     <---------GLK1(2)      --------->ANAC58                                                     --------->ARR11(3) <---------HSFB2a(2)       <--                                                 ---------->DOF2        --------->HSFB2a(2)       ---      ----------->RAV1(1)                     <---------At4g35610    --------->ARR14(2)          ----  --------->MYB46(3)    --------->LBD16 <----------DOF2       --------->At4g35610                <--- --------HVH21         --------->LBD16 <---------ANAC58       <---------At4g35610               ----- ->MYC3               --------->HSFB2a(2)     --------->At4g35610    <---------ARR14(2)         ----- --MYC3     --------->YAB1             <---------ANAC58      --------->ARR11(3)  --------->YAB1 <----   gtcaacaacaacaatgaaaaacatcccgaataacttaaaatgctttccagctaaagattctgtgatctgcagttctacaagaaacataaactcagtgaga  24308500        ---------->DOF2      --------->YAB1     <---------YAB1   --------->YAB1   <---------ICU4   -------->HAHB4  --------->ICU4  <---------ATHB51  <---------ATHB12                                    --------->ALFIN1                  ----------->GT1 ---------------AGL3                                <---------ANAC46                --------->ARR11(3) --->ZmHOX2a(2)                                     --------->ALFIN1                <---------ARR11(3) ----->CCA1(2)                      --------->At4g35610<---------ANAC46         --------->REM1(1) ---ZmHOX2a(2)       --------->GLK1(1) --------->At4g35610                     ------>MYB83 ---->ARR11(3)       <---------GLK1(1) <---------At4g35610                     ------>MYB46(1) ---->AGP1--------->DAG2--------->TOE2(3)         <---------ANAC46           --------->TOE1(2)   ---- -----ARR11(3)<----------DOF2 --------->ZAT6<----------DOF2    ---------->DOF2 -------->P      ------   tctaataatgaaaaggcttttggatttcttaaacactaagcagcagcttttgctgtgtggggaagaaaagctccacaaacctacaacatcttgtaataaa  24308600                                                                --------->ANAC58                                                      ------>ZmHOX2a(2)                                                     <------ZmHOX2a(2)                                                    --------->ARR14(2)     ------>ZmHOX2a(2)                                                    <---------ARR14(2)    <<<<<<<<<GATA-1                                                    --------->AGP1        <<<<<<<<<GATA-2                                                    <---------AGP1        <<<<<<<<<GATA-4                                                    --------->ARR14(3)    <<<<<<<<<GATA-3                                                    --------->ARR11(3)    <------ZmHOX2a(2)                        <---------ANAC46            <---------ARR11(3)   <---------ARR11(3)                <----------DOF2                     <---------ARR14(3)   --------->ARR11(3)              --------->At4g35610                  <---------CCA1(2)     <---------AGP1     --------->ZAT6     --------->ALFIN1     --------->ANAC58   --------->ANAC58  <---------ARR11(3) ------->GT1  --------->ZAT2                 --------->ANAC58 ---------->DOF2     --------->ARR11(3) ---->DOF2 <---------At4g35610    ---------->DOF2 ----------->ARR10     <---------CCA1(2)   agtaaaaacactaagcagctttggctgtgtgagaagaaaagctccacaagcctagatcttgtagtaaagcaactagatctctaacatcttcattctcttg  24308700                                                                                            ------>ZmHOX2a(2)                                                                                           <---------At4g35610                                                              ------>ZmHOX2a(1)            --------->At4g35610                                                              =====================================HOX2a_HOX2a                                                    =================HOX2a_HOX2a          --------->ARR14(2)                                                   --------->GLK1(1)                      <---------ARR11(3)                                                  --------->ARR11(3)                    <---------YAB1                                         <-----------GT1------>ZmHOX2a(1) ------>MYB46(1) --------->ARR11(3)         <---------ARR11(3)           <---------ICU4------>ZmHOX2a(2)     ------>MYB83  --------->ICU4      <---------ALFIN1               <---------YAB1<---------GLK1(1) <-----------GT1  --------->YAB1   aagcctctccacatcttcttcaccatggctcttgtactcatgtttaccttctgatctccttctcctctgtatcaccttccttctcttgtcatgatctgcc  24308800                                                                *TSS                                                           --------->ANAC58                                                       ------>ZmHOX2a(2)                                                      <------ZmHOX2a(2)                                                     <---------ARR14(3)                                                     --------->ARR14(2)                                                     --------->ARR14(3)                                                     <-----------ARR10                                  --------->ANAC58   <---------AGP1                              --------->CCA1(2)      <---------ARR14(2)                         ---------->DOF2 --------->AHL20(2)--------->ANAC58                   ----------->GT1--------->ANAC58   <---------ARR11(3)                    <---------          ----------->RAV1(1)<----------ID1          --------->ARR11(3)                 <---------ICU4   attcttcaacatccacagagagagagaaaaagagacaagtcaaataaacagagaagatctcaagacagagagcataagtgaaacagagaaatattactct  24308900                                                       --------->ZAT6                                                       <---------------AGL15                                                       --------------->AGL15    <----------DOF2                                                       ==============================================                       ------>ZmHOX2a(2)   --------->ANAC58         <---------ETT(2)           <---------WOX13(1)   <-------TEIL        <-----------GT1 --------->ETT(2) --GT1    <------------CBF--------->LBD16  --------->ANAC58      <---------REM1(1)  <----------DOF2   ttggacagacttaattgctgagtgatcccagagatgcacagagggaagccatagttaccactaagagttgtagacagcatttctttctttgtagtgaatg  24309000                                                  <---------------AGL15                                                  --------------->AGL15                                                 ------>ZmHOX2a(2)                                                 <-----------------AG                                                <------ZmHOX2a(2)                                               --------->ARR14(3)                                               <---------ARR14(2)                 ------>ZmHOX2a(2)             <---------ARR14(3)               --------->ARR11(3)              --------->AGP1               <---------ARR14(2)              --------->ARR14(2)               --------->ARR14(2)              <---------AGP1               <---------AGP1                  <---------ARR11(3)               <---------ARR11(3)              --------->ARR11(3)                        <-----------              <---------CCA1(2)         <----------ID1                            --------->CCA1(2)          >>>>>>>>>SARD1              ---------->DOF2               ---------->DOF2   <---------AHL20(2)          >>>>>>>>>CBP60g     ----------->GT1----------->ARR10  ----------->GT1  --------->ARR11(3) ==================================================================MADS_MADS     <---------ARR11(3)--   gatttttcagaaatttggatcttgtttttaagaagaaaaaaaaagacaagatcttgaattggtaatgggttaaagagagtatagatatataatggtacca  24309100                                   <---------ANAC46               <------MYB46(1)                                   <---------ANAC58               <------MYB83                                 <---------ANAC46                 <---------ANAC55(2)                                --------->ALFIN1                 --------->MYB111(1)                   <---------CCA1(1)       <---------ZAT18       --------->MYB59                   <---------RVE1(1)  <-------GAMYB        <------MYB46(1)        <---------YAB1          <---------AtMYB61          <------MYB83   <---------AHL20(2)         ------>ZmHOX2a(1)           <---------TOE1(2)   --------->AHL20(2)<---------AHL20(2) <---------ANAC46  --------->MYB111(1)                <-------  --------->ICU4  <---------GLK1(2)<---------ANAC58       --------->MYB59                    -------- ----AtSPL8       --------->ARR11(3)  <---------ZAT14    <--------P              <<<<<<<<<TBF1    <-- ------->AHL20(2) <---------ARR11(3) --------->ALFIN1<---------ZAT14  <---------AtMYB61     ---------   tgtaattaatatgagagaaagatttttttgtcctgtggtgtgttgtgcatttgagagtagtaggtattaggtatggtctcttcttcttctactattaaaa  24309200                                                                                        <---------AHL20(2)                                                                                 ----------->GT1                                                                               ----------->GT1   --------->YAB1  ---------->DOF2                                   <----------DOF2    --------->AHL20(2)   --------->WOX13(1)                                     <---------YAB1 <---------ZAT6 --------->AHL20(1) --AHL20(2)    --------->HSFB2a(2)              --------->AHL20(2)  ------>ZmHOX2a(2)   <---------AHL20(1) ->AHL20(2)    <---------HSFB2a(2)            ----------->GT1      <---------YAB1<---------ZAT6     < -----TEIL <----------DOF2                  ---------->DOF2       --------->ARR11(3)   <---------AHL20(2) >YAB1--------->YAB1--------->DAG2       --------->AHL20(2)       <---------ARR11(3)   --------->AHL20(2)   tgcattaatcaaactttatagaaaagtaccgtctgtgagtgaattaaaaagaaaatagttctgaatatgatctttgtgttatagtgaaaataaattttgg  24309300                              ---------->DOF2                           --------->YAB1                                                      <-----             <-----------GT1  <---------ICU4                                          ---------->DOF2         <----------DOF2  <---------YAB1                                         ----------->GT1        <---------DAG2  --------->YAB1                                    --------->At4g35610  <-----     <-----------GT1   <---------YAB1                                  ------>ZmHOX2a(1)    ---------   <---------DAG2   --------->LBD16                                   --------->TOE2(3)     ---------   <----------DOF2<---------LBD16                                  <-----------GT1--------->YAB1 -----------GT1  ------>ZmHOX2a(1)                          <----------DOF2     <---------WOX13(1) <-   tttcactttaccttttttcctccgcatgataataaagacaactctagctaatttggactgttctttttttttcctcagttggattgataaaagtatgacg  24309400  Previous    Next  AGI:  At5g60400.1    Description:  unknown protein Range:  from: 24308366    to: 24308864    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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