Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                ------>ZmHOX2a(2)                  ------>ZmHOX2a(1)                     --------->YAB1                 --------->TOE2(3)                    ------->TEIL      <---------ANAC58                               <---------CCA1(2)                  --------->At4g35610      <---------ANAC58                           <----------DOF2                        <---------At4g35610 ----->DOF2     ------>ZmHOX2a(2)          <----------DOF2  <---------ARR11(3)       <-------TEIL   <   aagtagtttcgttcttgatcctaagtcaatttgtctaacatatagcttttactttgaatcttgatccttgagtcattttgtataacatacagcttacaag  24299700                                                             --------->YAB1                                                           <---------YAB1                                                           <---------WOX13(1)                                                      <---------ANAC55(2)      <---------ARR11(3)                                                      <---------ANAC58         --------->ARR11(3)                                                      ----------->GT1         <---------CCA1(2)                                                      <---------ANAC46        <---------GLK1(1)    <---------DAG2                                    --------->ANAC55(2)     --------->GLK1(1)    <----------DOF2                --------->ANAC46   <---------ANAC58  <---------O2 ---------YAB1        <---------WOX13(1)            <-----------GT1 <-----------HVH21   ttatgactttattttgttttggtaattggtattctaaacgaaaatgaaatctaataacgtgattaatagtggtcacatggatatctcataaatctctatc  24299800                 --------->AtLEC2                 --------->ANAC58 ----------->GT1                 --------->ANAC58--------->DAG2   <---------ANAC58             ---------->DOF2                                                 -----   <---------ANAC58   --------->ARR14(2)                                                    ---------   <---------ANAC46   <---------ARR14(2)              --------->ANAC46                     ----------   caattgtgtgattaagaacatgcaaaactgcaaataaagtataaaaaatcatttacacaaaacttcatctagtttttggacatcaaattcacaaaaagca  24299900                          <----------DOF2              -------->ATHB1                                                                   <-----              <--------ATHB1                                                                  -------              --------->ATHB51                                                               <-------              <---------ICU4                                                              --------->YAB1              --------->YAB1                                                             <---------YAB1              --------->ATHB12                                                          <---------AHL20(1)             <---------ATHB12    --------->AHL20(2)                                     --------->AHL20(2)             <---------ATHB51    <---------AHL20(1)                                     <---------AHL20(2)             --------->ICU4      <---------AHL20(2)                         --------->YAB1<---------ICU4     --------->ZAT6    <-----------GT1                                      --------->ATHB12 --------   <-----------GT1--------->ATHB12                                         <---------YAB1--------->ICU4 ------>RAV1(1) <---------WOX13(1)               <---------DAG2   --------->AHL20(2)   --------->YAB1 >DAG2       <---------YAB1  <------------------------ANAC81      <---------AHL20(2)  <---------YAB1 >DOF2     --------->YAB1 <---------DAG2      <-----------GT1   --------->YAB1     <---------AHL20(2)   gcatataacactacaataattgatttcacttttattttatttgtttgtttacctttctaagttcaaatataaattctatgattagtttattataattaca  24300000                                                                       --------->LBD16                                                                 <------MYB83                                                                 <---------DEAR3(2)      <---------AHL20(2)                  ---------->DOF2        <------MYB46(1)  <---------AHL20(2)                    --------->ANAC58         <---------MYB46(3) <---------YAB1                         --------->ANAC58        *TSS  <---------ANAC46            --- ----YAB1                               --------->ANAC46     <-----------RAV1(1)          <---------- ----->CBF                <---------AHL20(2)                ------->MYC3                <-----------HVH21 ----GT1        <---------YAB1  <---------AtLEC2            <-------MYC3              <------NtERF2 ->YAB1    <-----------GT1--------->AHL20(2)     >>>>>>>>>TBF1 <--------P  --------->AHL20(2)--------   atttttattttttttactctgatttgaattttttacatggacacgaaagaagaagaagaccacatgttggttccgaataaaacatggccgagtcaccctc  24300100                                                    --------->LBD16          ------>NtERF2                           <---------LBD16      --------->TOE1(2)                         --------->ARR14(2)      --------->TOE2(2)             ---------->DOF2<---------LBD16                                  -      ------->GAMYB        <---------ALFIN1<------NtERF2                                           --  <---------WRKY38(1)      --------->AtMYB61    <---------ARR14(2)                        <---------ANAC58  <---------WRKY12      --------->DEAR3(1) --------->At4g35610                    <-----------GT1  -- ------>LBD16           --------->AtMYB61  <---------At4g35610               ---------->DOF2      --- -GT1--------->MYB46(3) <---------ALFIN1 --------->ZAT18              --------->ANAC58    <---------ANAC46 ->MYB46(3)            --------->MYB46(3)<---------ZAT18              --------->ANAC58    <---------ANAC58   cgagtcaacctccgactcgcttagcaccaccacatccactaagcccgctcaatccgggactgtttctatttcaagccctcaaagtcaccatgtcgtcttc  24300200                  <-----------HVH21                 ------>ZmHOX2a(2)                <------ZmHOX2a(2)          <---------ATHB12     ------>ZmHOX2a(2)                                                                      <--------    <------ZmHOX2a(2)                                                                ----------->HVH21   --------->ARR14(2)                                        --------->ATERF1(1)    --------->LBD16   <---------ARR11(3)                                       ------>NtERF2          <---------ANAC46   --------->ARR11(3)                                       <---------At4g35610    <---------ANAC55(1)   <---------ARR14(2)       >>>>>>>>>TBF1                   <---------ATERF1(1)    <---------ANAC58  <---------GLK1(1)     --------->ZAT14             --------->ARR11(3)             --------->ANAC55(2)  --------->GLK1(1)     <---------ZAT14            <---------At4g35610             <---------ANAC55(2) -------->LBD16<---------ARR11(3)                  --------->At4g35610             <---------ANAC58 ------->ANAC46--------->ARR11(3)                 ------->TEIL              ------>ZmHOX2a(1) ------->LBD16 --------->ARR14(2)          --------->HSFB2a(2)              ====================HOX2a_HOX2a ------>LBD16  <---------ARR14(2)          <---------HSFB2a(2)         <---------ALFIN1  ------>ZmHOX2a(2)   cccgagatcccaatcgagatcgtcagtgaagaagaaatggctattctcgatgcagctcttgcagcctcccgctccatcctcccttccgtgatccgttctg  24300300                     --------->ATERF1(1)                     <---------LBD16                     <---------------------WRI1                    <---------ATERF1(1)                    <---------RAP2.3(1)                    ------>NtERF2                    <---------ERF1                    <---------ORA47(2)                   <---------DEAR3(1)                   --------->ATERF1(2)                   <---------ATERF1(2)                  --------->RAP2.3(1)                  --------->ERF1                  --------->ATERF1(1)                  --------->DEAR4(2)                  <---------LBD16                 <---------ATERF1(1)                 --------->MYB52(1)                --------->DEAR3(1)                --------->ANAC46                ------->GAMYB               --------->DEAR3(2)               --------->MYB46(3)               <------------AtMYB77             --------->ARR14(2)             <---------ARR14(2)             --------->MYB52(1)            <---------GLK1(1)        --------->ANAC58        <---------ANAC46                                                 <-----------GT1        <---------ANAC55(2)                                              --------->MYB52(1)        --------->ANAC58                                               --------->ICU4       <---------LBD16                                             <------ZmHOX2a(1)     ----------->HVH21    --------->GLK1(1)                <---------HSFB2a(2)<---------ANAC58     <---------MYB52(1) <------NtERF2                      <---------------AGL15    <-----------HVH21<------NtERF2                         --------->HSFB2a(2)<---------ANAC58    <-----------TGA1--------->LBD16       --------->At4g35610     ----------->GT1       --------->GLK1(1)   --------->ANAC46--------->DEAR3(1) <---------ARR14(2)   --------------->AGL15       <---------ARR14(2) -MYB52(1)  --------->GLK1(1)         --------->ARR14(2)  <-----------------AGL1       --------->ARR11(3)   tttctccgtcacggataaccgccggcggaagtcccaaaacaatccgctcaattactctcttctccaagaggaaattatcggcttgttcagatatcgaaga  24300400                                                        --------------->AtSPL3                                                        --------------->AtSPL8                                                      --------->ARR14(2)                                                    --------->LBD16                                               ----------->HVH21                                              ------>ZmHOX2a(2)                                             --------->GLK1(1)                                            <-----------ARR10                                            --------->ARR14(2)                                            <---------AGP1                                            --------->ARR11(3)                                            <---------ARR14(2)                                      ----------->HVH21 <---------------AtSPL3                                  <---------ANAC58 --------->ANAC46                                  <---------ANAC58<---------LBD16                              <----------DOF2<------ZmHOX2a(2)                                  <----                      --------->GLK1(1)     <---------ARR11(3)                                 ------                  ==================================HOX2a_HOX2a                      <------ZmHOX2a(1)                  <------ZmHOX2a(1)  <-----------HVH21<---------ARR14(2)             ================                  ===================================HOX2a_HOX2a              <---------GLK1(2)<-----       --------->REM1(1)<---------ATHB12   <---------CCA1(2)------->TEIL<---------YAB1---------->DOF2   gtcttatctacatcgatttaggagaaatcaagctttaggtgtcacagatctcaccggaactgtacgttttttttatcacagattataggaaagaagagat  24300500                                       <------MYB83                                       <------MYB46(1)                        <----------DOF2                               <-----------------AG                       --------->KAN4(2)                           ------>ZmHOX2a(2)                             <---------KAN4(1)                           ===========================HOX2a_HOX2a        --------->KAN4(1)--------->At4g35610           ----------->HVH21   <-----------------AGL3                    --------->HSFC1(2) ---------->DOF2         <---------ARR11(3)       <---------AtMYB61      --------->HSFB2a(1)     ---- --ZmHOX2a(2)            --------->ARR11(3)    <------ZmHOX2a(1)--------->MYB52(1)      <-----------RAV1(2) --->ARR11(3)     --------->YAB1<---------------AGL15<---------ANAC58    <---------HSFB2a(1)   ------ ==HOX2a_HOX2a    <--------ATHB1--------------->AGL15<---------ANAC58    <---------HSFC1(2)<------ZmHOX2a(1) ----ARR11(3)    <---------YAB1<-----------------AGL1<---------ANAC46   <---------KAN4(2) -----------   catataagcacatttgacaatgatagtgatctctctctatttggttataggaatggtgtgagaaacaaatggagaatgttctttgttttggcaggagaaa  24300600  Previous    Next  AGI:  At5g60360.1    Description:  AALP (ARABIDOPSIS ALEURAIN-LIKE PROTEASE); cysteine-type peptidase. Identical to Thiol protease aleurain precursor (ALEU) [Arabidopsis Thaliana] (GB:Q8H166;GB:Q9LL83;GB:Q9S9A9); similar to cysteine proteinase, putative [Arabidopsis thaliana] (TAIR:AT3G45310.1); similar to cysteine protease [Brassica napus] (GB:ABA71355.1); similar to senescence-associated cysteine protease [Brassica oleracea] (GB:AAL60582.1); contains InterPro domain Peptidase C1A, papain; (InterPro:IPR013128); contains InterPro domain Peptidase C1A, papain C-terminal; (InterPro:IPR000668); contains InterPro domain Peptidase, cysteine peptidase active site; (InterPro:IPR0001 Range:  from: 24297123    to: 24299623    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g60370.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G57110.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60322.1) Range:  from: 24300064    to: 24302259    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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