Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                <------ZmHOX2a(1)                  --------->GLK1(1)           <------ZmHOX2a(2)---------->DOF2                  <---------GLK1(1)           =======================HOX2a_HOX2a       --------->AtLEC2            --------->ANAC58         <---------TOE2(3)         <---------ZAT18   <-----------HVH21               --------->ANAC46 --------->AtMYB61   <---------At5g28300 --->TOE2(3)--------->MYB52(1)     --------->ANAC58--------->MYB46(3)<-----------HVH21--------->ZAT18   taaacggtcatacaaaacggagttctcggttcgaagcacgacaacgcgatcaaaccatcgctgaggaaagaagtcacagccatggtagtccacaatgttc  24292700                                        ------>ZmHOX2a(2)                                      --------->ARR14(2)                                      <---------ARR14(2)                                  <---------At4g35610                                  ----------->RAV1(2)                                            <---                                  --------->ANAC55(2)                                         <------                                  <---------ANAC55(2)                                         -------        --------->YAB1            --------->At4g35610                                         <------       <---------YAB1          <---------ATHB12                                               <------  ------>ZmHOX2a(1)          --------->WOX13(1)                      ----------->GT1         <-------   cctccttctatcatagcatcgtcaagctcatcaatcacctgatccacaagttcaatacaatatagctaagaaggctaattcttcgaattgaatccaaatc  24292800        ---------->DOF2 -------DOF2 ---ARR11(1)                                                           <------ZmHOX2a(1) -->ARR14(2)                     --------->MYB52(1)                 <------ZmHOX2a(1)         ------- ---ARR11(3)              --------->GLK1(2)                ----------->GT1      <---------ARR14(2) <- ---ARR14(2)             <---------GLK1(2)                --------->ANAC58 --------->DAG2     ------- --CCA1(2)             <---------YAB1                     --------->ANAC58---------->DOF2 -----------   tttatcaaactaaagagtgaagcttaagattctagcaacggttcaaagtgttttgttgacaaggaaataaggaggataaagggatagggatggagtaaga  24292900                                                                              ------>ZmHOX2a(2)                                                                             <---------GLK1(1)                                                                             --------->GLK1(1)                                                                             <------ZmHOX2a(2)                                                                            --------->ARR11(3)                                                                            <---------AGP1                                                                            <---------ARR11(3)                                                                            <---------ARR14(2)                                                                            --------->AGP1          <                                                                            <---------ARR14(3)      -                                                                            --------->ARR14(2)      <                                                                            <-----------ARR10      --                                                                      <---------WRKY18(1)          <-    ------->GAMYB                                                    --------->WRKY38(1)           <-  -------->P                                                         ----------->HVH21             -- --------->MYB52(1)                          --------->ANAC58        --------->WRKY45             --- -->ANAC58                                   --------->ANAC58        --------->WRKY12           ----- --------MYB52(2)                            --------->ANAC46      <----------DOF2--------->At4g35610 -->ANAC58                       <---------At4g35610         <----------DOF2--------->ARR14(3)<------ >GT1                  ----------->HVH21<-----------HVH21<---------GLK1(1) <---------CCA1(2) --------   aactaaccgagtcttcgttgatgaagtgacactcgagctcattgtcccagccatggtagaattctttctctttgaccagatctccgatgcaaatataccg  24293000        <---------ANAC58        <---------ANAC46        <---------ANAC58                                                                       ------   <---------ANAC58                        <---------MYB52(1)                                  <-----   <---------ANAC58                      <---------ATERF1(2)                                   ------  <-------TEIL                          <---------ANAC46   ----------->HVH21                  ------- --------->GLK1(2)                      <---------LBD16   --------->LBD16                   --------- ---------GLK1(2)                  <---------ARR14(2)   <------NtERF2             --------->ANAC46  - -------->ARR14(2)                 --------->ARR14(2)   <---------LBD16         <---------ANAC58    < ---------ARR14(2)              <------NtERF2        --------->ATERF1(1)     <----------DOF2--------- ------->HSFB2a(1)            <---------DEAR3(1)    <---------GLK1(1)       <---------DAG2<---------- --------GLK1(1)             --------->ATERF1(1)  <------ZmHOX2a(1)     <---------RAP2.6(2) --------- --------HSFB2a(1)           <------NtERF2<---------DEAR3(2)           <-------TEIL <------NtERF2   < ------->GLK1(1)            <---------RAP2.6(3)<---------LBD16        --------->ARR14(2) ---------->ARF1 -------->ARR10             <-----------HVH21  <-----------RAV1(2)  <---------HSFB2a(1) <-----------HVH21 ---->LBD16                 <XXXXXXXXXXXXXXXXXXXXMIR169G*--------->ANAC46 ------>NtERF2--------->bZIP60(2) ---LBD16                  --------->DEAR3(1) <---------TOE1(1)     <------MYB46(1)------>NtERF2   <- ->MYB52(1)           --------->At4g35610--------->ATERF1(2)        <------MYB83<---------ANAC58   <-   gagattcgtggcttcggctagagcagaagccgtcgtcgatttgccggtaccaggagtccccgtgatcagtaggttcggcctttcgcgccttgtcacccca  24293100                                                              <---------ARR14(2)                                                              --------->ARR14(2)                                                             <------NtERF2                                                            --------->LBD16                                                           <---------ANAC46                                                          --------->At4g35610                                                          <---------At4g35610                                                          <------NtERF2                                                          <---------LBD16                                                          --------->RAP2.3(1)                                                          --------->ATERF1(1)                                                         ------>NtERF2                                                         <---------RRTF1(1)                                                         <---------ATERF1(1)                                                         <---------DEAR4(2)   <---------ANAC46                                      <---------ERF1   --------->O2                                          <---------ORA47(2)   --------->ANAC55(2)                                   <---------RAP2.3(1)   <---------ANAC55(1)                                   <---------RAP2.6(1)   <---------O2                                         --------->DEAR3(1)   <---------ANAC55(2)                                  <---------RRTF1(3)   <---------ANAC58                                     <---------RAP2.6(2)   <---------ANAC58                                     <---------RRTF1(2) --->MYB52(1)                                           <---------DEAR3(1) ----ALFIN1                                             <---------RAP2.3(2) ------>AtMYB77                                         --------->ATERF1(2) ---->HVH21                                             <---------RAP2.3(3) >ANAC46                                                <---------ATERF1(2) -------->ARR14(2)                                     <---------LBD16 ---------ARR14(2)                                     <---------ABI4(1) >ANAC58                                               --------->ATERF1(1) -GT1   --------->ANAC58                               <---------At4g35610 >ANAC58--------->ANAC58                              <---------ATERF1(1) ---------MYB52(1)<------MYB83                        <---------RAP2.3(1)     --------->ANAC58  <---- ------GAMYB      <------MYB46(1)                    <---------DEAR3(1)       --------->ANAC58  ----- ----------HVH21 --------->MYB59                 <---------At4g35610  <------------CBF      <-------TEIL   cggttacgtctcgccatgttcggtcttcttctatgaagcctgaagaaatttagcttcggcggcggaaactggaattggagacgcacagagagggtacatg  24293200                                             ------->TEIL                                          <---------YAB1                                      <--------P                    ----------->GT1<------NtERF2                   <---------TOE1(3) <-------GAMYB      <---------ICU4                   <---------TOE2(3)<---------ANAC46<---------AHL20(2)            <---------At4g35610  --------->ALFIN1   --------->AHL20(2)       <------------CBF ---MYC3 <---------MYB52(1)   <---------TOE2(3) <---------YAB1       --------->AHL20(2) -->MYC3<-----------HVH21<---------YAB1<---------MYB46(3)--------->AHL20(2)<---------YAB1   tggaagaaaccgtgagatgttagggttatttttaggtggggttgatgaatatgtttaatttttatattagaaaaaatactattgtgtttttttttttttt  24293300                                                             --------->TOE1(3)                                                             --------->TOE1(2)  <------NtERF2                                                       --------->YAB1          ------>NtERF2                                                      <---------ATHB12        <---------RAP2.6(2)                                                     --------->ANAC58         --------->RAP2.6(2)                                                     --------->ANAC58         --------->DEAR3(1)                ----------->GT1                   ------------>CBF            --------->ATERF1(2)             --------->YAB1                     --------->ANAC58 <---------HSFB2a(2)            <---------YAB1               --------->At4g35610<---------HSFB2a(1)<---------RAP2.6(3)           <---------AHL20(2)      ------------>CBF --------->WOX13(1)       --------->RAP2.6(3)          --------->YAB1 <---------TOE2(3)      --------->ANAC58 --------->HSFB2a(2)      --------->REM1(2)   --------->YAB1        <---------TOE1(3)  <-----------HVH21--------->TOE2(2)<---------ATERF1(2)   tggaattatagattataatggtgaaataaggttttcatacaatagctgtcaaggcaatcaaaaccttcgagagacataagccggccagtacttgtagact  24293400                   <---------TOE2(3)            ------>ZmHOX2a(2)                                  --------->At4g35610           <------ZmHOX2a(2)                               --------->ANAC55(2)           --------->CCA1(2)                               --------->ANAC58          <-----------ARR10          --------->AHL20(2)    --------->ANAC46          --------->ARR11(3)    <----------ID1             --------->ANAC58    ------>ZmHOX2a(1)          <---------AGP1        ----------->GT1            --------->ANAC55(1) <---------HSFB2a(2)          <---------ARR11(3)---------->DOF2    --------->YAB1  ----------->RAV1(2)          --------->AGP1   --------->AHL20(2)--------->ANAC58  <---------At4g35610 --------->GLK1(2)      ---------->DOF2      <---------AHL20(2)--------->ANAC58 ------->TEIL     --------->HSFB2a(2)   ctcagagacaaagatctaattaagaaaaattaaagagaaaaaaattcaagcatacaaatacacgcatctgagccaattttcctagaatccaaactcaaaa  24293500                                                                                                =====                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               ------                                               xxxxxxxxxxxxxxxx>smallRNA(i)                    <-----                                              ------>ZmHOX2a(2)                                ------                                             --------->CCA1(2)                                 <-----                                             <------ZmHOX2a(2)                                 ======                                            --------->ARR14(2)                                 ======                                            --------->AGP1                                     ------        --------->AHL20(2)                  --------->ARR11(3)                               <-------        <---------AHL20(2)                  <---------AGP1                                 <---------       <---------AHL20(1)                   <---------ARR14(2)                          <-----------GT1       --------->AHL20(1)                   <---------ARR11(3)                     <---------YAB1       <---------AHL20(2)                  <---------GLK1(1)   ======================================       --------->AHL20(2)                  --------->GLK1(1)   <---------------AGL15 <---------ARR11(3)    --------->YAB1                    ---------->DOF2       <-------TEIL           --------->ICU4   -   aatcaaaaataaaattacaaagtctaaatcaccataaaaacaaagagatctgagactagagattcacattaagagaaacaaaaccatgattttctttacc  24293600  Previous    Next  AGI:  At5g60340.1    Description:  maoC-like dehydratase domain-containing protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO21798.1); contains InterPro domain MaoC-like dehydratase; (InterPro:IPR002539); contains InterPro domain AAA ATPase, core; (InterPro:IPR003959) Range:  from: 24291105    to: 24293117    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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