Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      <---------ANAC55(2)                                              <-------TEIL                       --------->WRKY38(1)                                XXXXXXXXXXXXXXXXXXXXX>MIR845B                    --------->WRKY45                     <---------MYB52(1)    ------>MYB46(1)                       --------->WRKY12  --                    --------->TOE2(3)      ------>MYB83                         --------->DOF5.7(2)<-                   --------->ANAC46      <---------MYB59             <----------DOF2             ---- ---->GT1   <---------AtMYB61 <---------AtMYB61<---------ICU4 <<<<<<<<<NAM   <------NtERF2    <------   aacaacttgaggctatggtctacgttattgttttggtctgataccaaattcattacatgagtcatcccttccttttggcatcgttgacttcaaatgcttt  24287600                                        --------->AHL20(1)                --------->YAB1                                        --------->AHL20(2)            <---------YAB1                                        <---------AHL20(2)          <---------ICU4             <-----     ------->TEIL                       <---------AHL20(1)         --------->ICU4          ------>ZmHOX2a(1)  <---------YAB1         --------->ATHB12    <---------AHL20(2)   --------->TOE2(3)        <--------- ------->ICU4        ----------->GT1   --------->AHL20(2)      <-----------GT1        --------->GLK1(1) --------YAB1      ------->MYC3       xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---------YAB1   --------->TOE2(3) ----->YAB1        <-------MYC3   <---------AHL20(2)   --------->ICU4<XXXXXXXXXXXXXXXXXXXXMIR868 ----DOF2     <-----------GT1     --------->AHL20(2)--------->WRKY18(1)--------->YAB1 <---------GLK1(1)   gatgatgaaacttatttaacatgtggataattgaatttaaattttatttttttggtcaatatgaattacattattatcatataagaagaaatcctttata  24287700                                            --------->CCA1(2)     ----------->HVH21                      <---------GLK1(1)                    <-------TEIL    <---------WOX13(1)       --------->YAB1 --------->GLK1(1)              <---------YAB1  --------->ATHB12          <---------YAB1 <---------ARR11(3)            --------->YAB1 <---------YAB1        ----------->GT1     --------->ARR11(3)     <---------TOE2(3)<------------CBF ----YAB1            <-------MYC3      ---------->DOF2   --------->YAB1  <---------ICU4 -DOF2               ------->MYC3<---------ANAC55(2)------------>CBF    --------->ICU4   aatgtgattgacagtctgatacacatggttataatacataagaaagatatccaaaacaatagtattttgaggctattatgacatacattgttagaaccag  24287800                    <------------CBF               <------------CBF              <---------ICU4              --------->ATHB51              <---------AHL20(2)              -------->HAHB4              --------->ATHB12              -------->ATHB1             --------->ICU4             <---------YAB1                                                <---------ATHB12             <---------ATHB51                                           --------->AHL20(2)           --------->YAB1               --------->MYB52(1)    --------->ICU4          <---------YAB1                <-----------GT1       <---------YAB1          <---------AHL20(2)       --------->AHL20(2)      <---------YAB1  ------------>CBF          --------->AHL20(2)     --------->TOE2(3)     <------------CBF <---------AHL20(2)         --------->AHL20(2)   ----------->RAV1(1)    --------->ARR11(3)--------->AHL20(2)   acaagagaccatataattattgtattgaacaacaacataaaataactggtttgaagttattgtcatggttacatttaatcaatttcattttgtatattca  24287900                             ------>ZmHOX2a(1)                             --------->LBD16                     <-------TEIL                <------ZmHOX2a(1)             <---------HSFB2a(2)     <------------CBF                                         -------             --------->HSFB2a(2)  ------------>CBF                                           --------     --------->CCA1(2)     <---------LBD16        --------->ICU4         --------->AHL20(2)  <-------   actcaagagatgcctctaggaaatacatttcctgaagacaattgaacttggaatgttgaaacttgtgtttgaagataaatttgcattttgaaactccaga  24288000                                                      --------->ARR11(3)                                                      <---------ARR11(3)           <----------DOF2                                                 ------->TEIL                --------->At4g35610                                      --------->HSFB2a(2)                    ----------->RAV1(2)                                      <---------HSFB2a(2)                    <---------At4g35610                                    --------->At4g35610  <---------YAB1    --------->YAB1                                    <---------At4g35610 ------>ZmHOX2a(2) <---------ATHB12 -->LBD16                         <---------ANAC58--------->At4g35610   --------->YAB1 ->HSFB2a(2)                      <---------ANAC58<---------At4g35610<----------DOF2  <---------ANAC58 --HSFB2a(2)               ------------>CBF--------->ATHB12          --------->TOE2(3)<---------ANAC58   aacaaaaccagacttctctctgtttcattagcaatggcttctgaaagattgcatctgatcttattggtcttctttaatcatctgactttcttgttaagtc  24288100                                                                          --------->ARR14(2)                                                                          --------->ARR11(3)                                                                          <---------ARR14(2)                                                                        ----------->ARR10                                                                    --------->At4g35610                                                                    ----------->GT1                                                                 --------->At4g35610                                                                 <---------At4g35610                                                                 --------->ZAT2                     <                                                                 <---------ZAT2              <-------                                     --------->ANAC58           <---------ARR14(2)           <-------                                     --------->ANAC58    --------->HSFB2a(2)        --------->HSFB2a(2)                             <----------DOF2             <---------HSFB2a(2)    <----------DOF2     <                            <---------ANAC58<---------ZAT2      --------->ARR14(2)  <---------HSFB2a(2)                            <---------ANAC58--------->ZAT2   --------->ANAC46 ------>ZmHOX2a(1)     -   aacaagaagaagccggtttcatctacaatggctttggccaagctcaagctggtcttcatctagacggagctgctaaaatcctctttccagatggattgtt  24288200  ----------->HVH21                         --------->ANAC58 ---------At4g35610           --------->WRKY18(1) ----RAV1(1)                 <-----------HVH21 <-----------GT1 --MYB46(3)           --------->MYB46(3)    --------->ANAC58 -------GAMYB    --------->ANAC46   <----------DOF2                       ----------->ARR10 -------->At4g35610 ----------->RAV1(1)     --------->ANAC46    <-------TEIL        <----------DOF2<-   gcagttgacaaatgcctcaacacaacaaatgggtcatgctttcttcaagaaaccattcaagtttgattcatatgagaagaaactctctttttcgactcat  24288300                                                                                         <------ZmHOX2a(2)                                 <---------MYB46(3)                                     --------->AGP1                                <---------AtMYB61                                       --------->ARR14(2)               ----------------->AG<---------RAP2.6(2)                                  <---------ARR14(2)               ----------------->AGL1                                                   <---------ARR11(3)      --------->ZAT18        ----------->HVH21                 ------>ZmHOX2a(1)       --------->GLK1(1)      <---------ZAT14      --------->ZAT2                  --------->ARR14(2)          --------->At4g35610      <---------ZAT18      --------->At4g35610             <---------ARR14(2)      --------->ANAC58   <---------ANAC58        <---------At4g35610             <-----------GT1         --------->ANAC58   <---------ANAC58        <---------ZAT2                 <---------CCA1(2)    --------->ANAC58 <---------ANAC58      --------->LBD16           <---------ANAC58              --------->ANAC58 <---------ANAC58     <---------LBD16            <---------ANAC58              --------->ANAC46 <---------ANAC46    <---------LBD16         <---------GLK1(1) =================================HOX2a_HOX2a --------ANAC46<-----------------AGL1<------NtERF2 <----------DOF2        <---------GLK1(1)   tttgtgtgtgcgcttgtgcctaaaccgggagctgatggtggccatggaattgcctttgttgtatcctcttccatagatttcacacaagcagatccaactc  24288400                                 ------>ZmHOX2a(2)                                --------->GLK1(1)                                <---------GLK1(1)                               --------->ARR11(3)                               <---------AGP1                               --------->ARR14(2)                               ------->TEIL                          --------->MYB52(1)                 <---------ARR11(3)           --------->At4g35610                          <---------YAB1                 --------->ARR11(3)           <---------ZAT2                    --------->ZAT14              <-----------GT1  <---------ARR11(3)            --------->At4g35610--------->ZAT18  <---             <-----------GT1   <---------ARR14(2)            <---------At4g35610<---------ZAT14  <---         <----------DOF2--------->MYB46(3)    <---------At4g35610             --------->ZAT18--------   agtacttgggacttttaaacatctcaacaaatggatctccatcttctcagcttctagctattgagctcgatactgttgagagcgcagagtttgatgatat  24288500  Previous    Next  AGI:  At5g60320.1    Description:  lectin protein kinase family protein. similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G45410.1); similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G45330.1); similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G45440.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21607.1); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinas Range:  from: 24288034    to: 24290061    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version