Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -          --------->AHL20(2)                          ----------->GT1                              --        --------->AHL20(1)           <---------ARR11(3)--------->At5g28300                   <-------        --------->AHL20(2)           --------->ARR11(3)<-------GAMYB                   <-----------ARR10       --------->YAB1               --------->CCA1(1)<---------TOE1(3)                 --------->ARR14(2) ----------->GT1                    --------->RVE1(1)<---------TOE2(3)                 <---------ARR14(2) --------->TOE1(3)              --------->AHL20(2)  <---------At5g28300             --------->YAB1--- --------->TOE2(3)           --------->TOE2(3)     <-----------GT1        ----------->GT1    -------- ---------->GT1       ------>ZmHOX2a(1)          <----------DOF2    <---------TOE2(3) <---------CCA1(2)   aaacgttaaaaataatatggggtcctgctaaacttaaaatatctgttttcgttttacggttacatttgttaatgtaatgtaaaaaatcatatctgcctaa  24265800                                                       <-------GAMYB                          -------                                                    <---------At5g28300                       -------                                               <---------AHL20(2)                             -------                                               --------->AHL20(2)                            --------                                              --------->AHL20(2)                             <-------                                           --------->AHL20(2)                                <-------       <-----------GT1                    <---------AHL20(1)                                 <------- ---------->GT1                           --------->AHL20(1)                                 -------- ------->DAG2                             <---------ARR11(3)                  <---------ARR11(3) --------AGL15                            --------->ARR11(3)  --------->ICU4  --------->ARR11(3) ------->DOF2<-----------RAV1(1)  ----------->GT1  <-----------GT1 --------->TOE2(3)---------->DOF2 ------->AGL15                    <---------ZAT6  --------->MYB46(3)          <---------GLK1(2)<-----   aaaagttattaacaaatgttgttcaaaaacacaattgtgttaaaaatatttaatcaccgttgtaatatttcttaattctagattttcaaagaaaaattat  24265900                                                  <---------YAB1 ->ATHB1                               <-----------TBP -->ATHB51                             --------->AHL20(2) -->ATHB12                             <---------AHL20(2)                  --------->AHL20(2) ->AHL20(1)                          --------->AHL20(2)                    ----------->TBP --AHL20(2)                       <---------AHL20(2)                      <---------AHL20(1) --YAB1                --------->AHL20(2)     <---------GLK1(2)      ----------->TBP--------->KAN4(1) --ATHB51 <---------ANAC55(2)     --------->AHL20(2)               --------->YAB1 <---------GLK1(2) ->ICU4   <---------TOE2(3)       <---------AHL20(1)     <----------DOF2  --------->AHL20(1) -------- -------CBF   ----------->TBP    --------->AHL20(2) <---------AHL20(2)   --------->AHL20(2) <--------   tgaaagactattaagtatatatagattatatgacattaaatttatatagattattttttctttgggcaactataaatatatatagattattcagtcaaag  24266000                                           <-------MYC2                                           ------->MYC4                                           <-------MYC3                                           -------->ABF1                                           ------->MYC2                                           ------->MYC3                                          <---------ANAC55(2)                                          --------->ANAC55(2)                                          --------->TGA1a                                <---------MYB52(1)                               <-----------TGA1                               <-----------HVH21                              --------->ANAC46      <-----------RAV1(1)                              ------->GAMYB<-------MYC4           <---------AtLEC2                              ======================MYC_MYB    <-------MYC2                             --------->MYB46(3)   <---------ICU4 <-------TEIL                             <------------AtMYB77<---------YAB1------->MYC4                             =======================MYC_MYB    <-------MYC3                    <-----                            <---------At5g28300  --------->ICU4<-------PIF4                   <------                   <---------ARR11(3)     --------->O2         ------->PIF5              <----------DOF2                   --------->GLK1(2)      <---------O2         ------->MYC3             --------->TOE2(3)                   --------->ARR11(3)     <---------TGA1a      <-------PIF5       --------->WOX13(1)       <----------ID1      --------->MYB52(1)  --------->YAB1  ------->MYC2   --------->bZIP60(1) -->DOF2          --------->RVE1(1)<---------ANAC55(2)         ------->PIF4   <---------bZIP60(1)  <- -WRKY38(1)     --------->AHL20(2) --------->ANAC55(2)     <------NtERF2 <------------CBF<---------DAG2   taactaaaaaaaacaaaaaaaaatctagttaaccgtcacttaacacgtgtcataatggggcagcatgtgcatgtccattgatgtcattcacctttatcac  24266100                                    --------->ANAC58                                    --------->ANAC46                                    --------->ANAC58                                --------->ANAC58                                                 ----                                --------->ANAC46                                                 ----                                --------->ANAC58  ----------->RAV1(1)                         <------ ----At5g28300             <---------GLK1(2)     --------->REM1(1)                     <---------HSFB2a(2) -----GT1               --------->YAB1           --------->MYB46(3)                    --------->HSFB2a(2) --------MYB52(1)     --------->MYB52(1)       ----------->RAV1(1)                   <------ZmHOX2a(2)   cgctattttcatcaagaacaaaacaaacagaatcacacaagaaacagagcaacaacacatattcaacaaaaacaaaatcgccatgagatcgagaagtaac  24266200                                                    <-------GAMYB                                                    <------NtERF2           <---------MYB59                                                   <---------MYB46(3)      <---------At4g35610                                                   <---------DEAR3(2)      --------->ZAT2                                                  <---------DEAR3(1)       <---------ZAT2                                                  <---------DREB2C(2)      --------->At4g35610                                               <---------DEAR3(1)       --------->DEAR3(1)                                              <---------LBD16         --------->At4g35610                                          <---------ARR14(2)          --------->ZAT2                                          --------->ARR14(2)          <---------At4g35610                               ------>ZmHOX2a(1) <------NtERF2     <---------At4g35610            <-- ----->TOE2(3)               ----------->RAV1(2) <---------ABI4(1) --------->At4g35610           <--- ----->TOE1(3)              ------>ZmHOX2a(1) ------>ZmHOX2a(1)<---------ANAC58                  ---- -----GT1              <----------DOF2   ------>ZmHOX2a(1)     <---------ANAC58    --------->MYB52(1)   cttataggtctcataaacttcttcactttcctcctgtcgattcctatcctcggcggtggaatatggcttagcagccgagctaactcaaccgattgcctca  24266300                                                                                             ========                                                                                             <-------                                                                     <---------ANAC58        ========                                                          <---------ARR14(2)                 ========                                                          <---------GLK1(2)                  <-------                                                         <------NtERF2       <---------------AGL15                                                 <----------DOF2    <---------ZAT2           --------                      --------->YAB1          --------->ARR11(3)  <------NtERF2              --------                   <---------ICU4             <---------ARR11(1) --------->LBD16             <-------                  --------->ICU4              <---------ARR11(3)--------->DEAR3(1)    --------->ARR14(2)         <---------ZAT18                 <-----------HVH21--------->ARR14(2) --------------->AGL15 <-   ------>ZmHOX2a(1) <---------YAB1  <---------ICU4     --------->LBD16     ----------------->AGL3<--   >>>>>>>>>>>>>>>>>LFY --------->At4g35610  <---------CCA1(2) <---------LBD16        <---------ARR11(3) -------GLK1(2)<---------ATHB12      --------->YAB1    --------->RAP2.6(2)  ----------------->AGL1<-- ------At4g35610--------->YAB1      <---------ATHB12   --------->ANAC46   <-----------GT1 ------>ZmHOX2a(1) ----->At4g35610<---------ICU4    --------->WOX13(1)  <---------LBD16<---------ANAC58 <---------ARR14(2)   gattcctccagtggccactcattatcatcggaatatcaatcatggtcatatctttagccggaatcgccggagcttgttaccaaaacaagttcctcatgtg  24266400    <---------DAG2 <-----------GT1 =========bZIP_DOF ----RAV1(1) ===============bZIP_DOF =============================bZIP_DOF                                   ---------->DOF2 --TGA1a                                                              --------->YAB1 ->O2                                                       <---------ANAC58                        - ->TGA1a <-----------GT1                         <-----------ARR10   <---------ZAT6                -- --O2<----------DOF2                         <-----------GT1<---------ANAC58           <---------MYB52(1) ---------DOF2                            <---------ARR14(2)--------->ANAC55(2)       <---------DEAR3(2) -------ANAC58                            --------->ARR14(2)<---------ANAC55(2) ---------->CDC5   --- -------ANAC58     <----------DOF2       <------ZmHOX2a(1)  <---------ANAC46    <-----------RAV1(2)--   gctttaccttttcaccatgttctttgtaatcgctgctcttataggattcacaatcttcgcttacgtagttactgataaaggctcaggccggtttgtgatg  24266500                                        ----------->GT1                                        <---------MYB46(3)                                       <---------AtMYB61                                       <---------MYB46(3)                                      <--------P                                      <---------MYB55(1)                                     <-------GAMYB               <---------ICU4        <---------MYB52(1)                                   <---------ANAC46              <---------YAB1      <---------LBD16                                       ------>ZmHOX2a(2)              --------->ICU4  <---------KAN4(1)                                         <---------ANAC58       <---------ARR14(2)     <---------ICU4                                            <---------ANAC46       --------->ARR14(2)    <---------YAB1                                             <---------ANAC58       <---------ARR11(3)  <--------ATHB1                                              <------ZmHOX2a(2)       --------->ARR11(3)  --------->YAB1          <---------ANAC58                   --------->ARR14(2)      <---------CCA1(2)    <---------ICU4<-------GAMYB                          --------->CCA1(2)     <---------MYB52(1)    --------->ATHB12        <---------ANAC58             <---------GLK1(1)    <---------DEAR3(2)    <---------YAB1<------MYB83  <-----------HVH21         --------->GLK1(1) -------->DEAR3(1)        <---------ATHB12  ---------->DOF2                    <---------ARR11(3) ------->DEAR3(2)    --------->TOE2(3)<---------MYB52(1)       --------->MYB52(1)--------->MYB52(1) ---->TEIL <---------YAB1 --------->ICU4<------MYB46(1)----------->HVH21       --------->ARR11(3)   < ------->MYB46(3)<---------YAB1--------->KAN4(2)<------ZmHOX2a(1)   --------->ARR11(3)<---------ARR14(2)   aaccgtcggtatcttgattattatctcaatgattattccggttggttaaaggaccgtgtcacagataatggatattggagagatatcggatcgtgtgtta  24266600                                                                                                    <                                                                                                    <                                                                                                  <--                                                                                          <---------TOE2(3)                                                 --------->ARR14(2)                       <---------TOE1(3)                                                <---------GLK1(2)                    <-----------RAV1(1)                                              --------->LBD16              --------->ARR11(3)   <----                                             --------->HSFC1(1)            <---------ARR11(3)   -----                                             --------->HSFB2a(2)          --------->GLK1(1)    ------   <---------LBD16                           <---------HSFC1(1)           <---------GLK1(1)    <----- --------->GLK1(2)               <---------AHL20(2)        <---------TOE1(2)         ------>ZmHOX2a(1) <---------ARR14(2)              --------->AHL20(2)        <---------TOE2(2)       ----------->RAV1(2) ---------GLK1(2)  --------->ATHB12          <---------HSFB2a(2) <-----------GT1   <-----------------AGL1   gagattctggagtttgtaagaagattggaagagatttaaatggtgttccagaaactgctcatatgttttacttcagaaatctttctcctgttgaggtatt  24266700  Previous    Next  AGI:  At5g60220.1    Description:  TET4 (TETRASPANIN4). similar to TET3 (TETRASPANIN3) [Arabidopsis thaliana] (TAIR:AT3G45600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21787.1); contains InterPro domain CD9/CD37/CD63 antigen; (InterPro:IPR000301) Range:  from: 24266183    to: 24267291    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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