Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           <------MYB83                                         <------MYB46(1)                            <---------YAB1                                         <---------ANAC46              <---------ATHB12          ----           <------ZmHOX2a(2)            --------->MYB59       --------->ANAC58   <---------AHL20(2)    <---------AtMYB61                   <---------MYB46(3)    --------->ANAC58   --------->AHL20(2) <----------DOF2                    <-----------RAV1(1)     <-----------RAV1(2)  <---------YAB1------   actcttttggtcgatcaagaagtctccaagagttgtttttgttgggtctaaacaaaacttggccagggaacaaatcaaactatattattaatcttctaca  24184800                                                               ---------->DOF2                                                            ---------->DOF2                 <--------             ------>ZmHOX2a(1)                           <-----------HVH21                  ---------            <---------ANAC58                          <---------At4g35610                  <---------CCA1(2)      <---------TOE1(2)                               --------->At4g35610          --------->ARR14(2)     ------>ZmHOX2a(1)                                --------->ZAT2               <---------ARR14(2) ------->RAV1(2)        ----------->GT1            ---------->DOF2                <------ZmHOX2a(1) --->REM1(1)<---------ANAC58--------->AHL20(2)  --------->ANAC46  --------->At4g35610  <-----------HVH21   tctggtcctaagttccttactatctcatgttaaaatttgaagtctaatatactcaaagctgtcaaagaagcagaacatggaagaggaactgtcatatctg  24184900   --------------->AGL15   <---------------AGL15  ========================================MADS_MADS  <-----------------AG  ----------------->AG  ----------------->AGL3                 ------>NtERF2  ----------------->AGL1                --------->ANAC58  <-----------------AGL1                --------->ANAC58                            ---------->DOF2  <-----------------AGL2                --------->ANAC46                           <---------WRKY12  <-----------------AGL3           <-----------ARR10                               <---------WRKY38(1)  ----------------->AGL2----------------->AGL3                                     <---------WRKY45 -ARR14(2)     <---------ATHB12    --------->GLK1(2)           ---------->DOF2   <-----------HVH21 >ARR14(2)   --------->WOX13(1)   <---------GLK1(2)      ----------->GT1<---------HSFB2a(2)        <-   agaaaccaaaattggcaatcttgcatttcatatttagaatctacgccatagtattgagatggaaacaaagagttttcgaagagggtcaaagagtttgact  24185000            <---------ATHB12         <---------ALFIN1                                                                     <------         --------->AtMYB61                                             <---------ANAC55(2)    <------      --------->ANAC46--------->At4g35610                              <---------ANAC46       -------      --------->bZIP60(1)                                             <---------LBD16        --------   ----------->HVH21  <---------At4g35610               --------->ANAC55(2)  <---------ZAT14<-------- <----------DOF2  --------->TOE2(3)     --------->MYB46(3)           --------->MYB52(1)   --------->WOX13(1) --------YAB1--------->YAB1     <---------AHL20(2)      <---------ANAC55(2)<---------------AtSPL3<---   tatctttgacaccactcatacattagctgttcatataatctaacaactagtcaatatcaagtgtctccaaattacggagagtacttctctaccaattatc  24185100                                                               --------->ZAT6                                                            --------->MYB55(1)                                                           <---------MYB59                                                           <---------MYB111(1)                                                           <---------MYB46(2)                                                           <---------MYB111(2)                                                          --------->ANAC58                                                          --------->ANAC55(1)                                                          --------->ANAC46                                                  --------->ANAC58                                                  --------->ANAC46 ---ARR11(3)                                ------>ZmHOX2a(1)------>MYB83 -----GT1                             --------->ARR11(3)  --------->ANAC58------>ZmHOX2a(1) -->ARR11(3)                    <-----------GT1   --------->ANAC58   <----------DOF2    <---------TOE2(3) ->YAB1                 <------------CBF  ----------->RAV1(2)------>MYB46(1)----------->TBP      ---- -ATHB12--------->YAB1 <---------ICU4 <---------ARR11(3)  --------->ANAC55(2)         ---------->DOF2 -------DOF2       <-----------GT1   <---------CCA1(2)    <---------ANAC55(2)       --------->ANAC46   tttttgtttttcataaacattttactaattgttttttctatatctcctgctcaagcaaacacctaactctcctttcctatatatacactaaaggttgaaa  24185200                                                                                    <---------At4g35610                                                                                    --------->At4g35610                                                                                    <---------ZAT2                                                                                    --------->ZAT2                                                                              <-----------HVH21                                                                              --------->REM1(2)        ------------>CBF                                                    --------->LBD16     <<<<<<<<<GATA-2                                                       <---------ANAC58     <<<<<<<<<GATA-3                                                       <---------ANAC46     <<<<<<<<<GATA-1                                                 --------->ANAC46     <<<<<<<<<GATA-4                                   ----------->RAV1(2) <---------ANAC58       <--    ------->TEIL                                       <---------ANAC58  ------>NtERF2            <--    --------->ARR14(2)                                 <---------ANAC58 --------->DEAR3(1)        <-- <---------ATHB12                                     -------->P     --------->ANAC58 --------->ZAT18 -------->CBF         *TSS           <------NtERF2   <-----------GT1 --------->ANAC58 <---------ZAT18   acaatgaatccacaatctacagcaaaacataagcgaggcagagtcttcagaaaacttacctgctctaaacaacgcctccgtgtccaagctcacttcaatg  24185300                    --------->ARR14(2)             ------>ZmHOX2a(1)     <---------At4g35610                    ------>ZmHOX2a(1)     --------->ANAC58 -------ANAC58 --------->At4g35610         --------->TOE2(3)      --------->ANAC58 -------ANAC46 --------->ZAT2         <<<<<<<<<TBF1               --------->ANAC46          --------- -------ANAC58 <---------ZAT2      <<<<<<<<<TBF1     <----------DOF2        --------->ANAC46<--------   gcgttacagctactcctagctgtattctcttgtgttcttcttcttcctcaacctgcatttgggattacaaggcattatacgctggaagtatgtgaagatt  24185400                                                                                      <----------DOF2                                                                                  --------->ANAC55(2)                                                                                  --------->ANAC46                                                                                  <---------ANAC55(2)                                                                                  <---------O2                                                                                  --------->O2                                                                                  --------->ANAC58                                                                                  --------->ANAC55(1)                                 <---------MYB52(1)                        <---------ANAC55(2)                 <---------------AGL15                                     --------->ANAC58  --------                 --------------->AGL15                                     --------->ANAC55(2)                <-----------------AGL3                        <------ZmHOX2a(2)   --------->ANAC58                --------->TOE2(3)--------->ICU4             --------->At4g35610 <---------ALFIN1-----     <---------ANAC46---------->DOF2              <---------ANAC58         --------->ANAC58  -------- >ICU4          <-----------------AGL2            <---------ANAC58         ----------->GT1 ---------- -YAB1          <-----------------AGL1            <---------ANAC46   ----------------------->TaNAC69(2)   gtttcttctgtgtaaatttcttaaaaaggaatgcagttattgatagaaagtttcgttttcgcagatcaaaatgcagaacgtaacacgtctttgccacaca  24185500                                                                        ---------->DOF2                                                                --------->ARR14(2)                                                                <---------ARR14(2)                                                            <-----------RAV1(2)<---------MYB52(1) ->ANAC58                                               ----------->HVH21    ----------->GT1 ----->DOF2                        ------>ZmHOX2a(1) --------->DAG2<---------YAB1            -------- ->ANAC58              --------->HSFC1(2)     <---------ANAC58  --------->GLK1(2)            -------- ->RAV1(1)             <---------HSFC1(2)     <---------ANAC58 <---------GLK1(2) --------->WOX13(1)<-   aagagccttgtttctgtaaacgggcagtttccaggtcctaagcttattgctagagaaggtgaccaggttctgatcaaagtcgttaatcaagtgccaaaca  24185600                                                                                    <---------ANAC58                                                                                    <---------ANAC55(2)                                                                                    <---------ANAC46                                                                       ----------->RAV1(2) --------->GLK1(2)                                                                       <---------At4g35610 <---------        <---------ALFIN1   <-----------GT1                             --------->At4g35610 --------->ARR11(3)       --------->ZAT14--------->TOE2(3)                                --------->ZAT2      <---------ARR11(3)       <---------ZAT14--------->YAB1                              ----------->HVH21 <---------ANAC58 ->ANAC58             --------->TOE1(3)                          <---------WOX13(1) ----------->GT1 ->ANAC58            <<<<<<<<<ARR2                            <---------YAB1 <----------DOF2 --------ARR11(3)    <<<<<<<<<ARR1                     --------->ICU4  <---------ZAT2--------->LBD16   acatctctctccactggtaaacaatcttaaaaccacttgcactatacattaagagcaatgtttgatgactgacagctggctttaatccgtgaaaatctca  24185700  Previous    Next  AGI:  At5g60022.1    Description:  other RNA Range:  from: 24184367    to: 24187487    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g60020.1    Description:  LAC17 (laccase 17); copper ion binding / oxidoreductase. Identical to Laccase-17 precursor (LAC17) [Arabidopsis Thaliana] (GB:Q9FJD5); similar to LAC2 (laccase 2), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT2G29130.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60348.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21726.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69151.1); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Cupredoxin (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR0 Range:  from: 24185222    to: 24187688    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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