Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->LBD16                                                                --------->HSFC1(2)                                                                <---------HSFB2a(1)                                                                --------->HSFB2a(1)                                  --------->AtMYB61             <---------HSFC1(2)                                  --------->DEAR3(1)       --------->YAB1                                  <---------ALFIN1     --------->AtMYB61                ------>ZmHOX2a(1)                               --------->ANAC46     --------->bZIP60(1)                <---------ANAC58                       --------->MYB59              <---------bZIP60(1)                <---------ANAC58                  <---------TOE2(3)   <-----------HVH21<---------ALFIN1          --------------->AtSPL8   ttaggcaatagaacagagttgatgttaggcaaaacaccaccgtgagcgattgtgacaccactcagaagtttccccaattcttcatcgttccttatcgcga  24133000                                                                              <---------AHL20(2)                                                                   --------->TOE2(2)                                                                 --------->GLK1(2)                                                                <---------ARR14(2)                                                                --------->ARR14(2)                                                                <---------GLK1(2)                                                             <---------HSFB2a(2)                                                             --------->HSFB2a(2)                                                         <---------ZAT2       --------->AHL20(2)                                                        --------->ANAC58      <---------AHL20(1)                                                        --------->ANAC58      --------->AHL20(1)                                                     --------->ZAT2--------->TOE1(2)                                                    --------->ANAC58         <---------ATHB12                    --------->TOE2(3)               --------->ANAC58     <------ZmHOX2a(2)                  <---------YAB1                    --------->ANAC46    --------->ARR11(3)         <---------LBD16    <---------ANAC58   --------->DOF5.7(2)----------->RAV1(2)   --------->YAB1   --------->At4g35610      <---------ANAC58<------NtERF2--------->At4g35610 --------->AHL20(2)   gaagaagatgcctcggaattatccttgatttcttgttatctctcgcagcgttaccagcaagctccagaacctgagatcaataaattcgaatcagaaaatt  24133100                                         --------->HSFB2a(2)                                  ----------------->AGL1                                    <--------                                <---------ARR14(2)            <---------ANAC46        --------->AtLEC2                                --------->ARR14(2)            --------->DEAR3(1)  <------NtERF2                                --------->GLK1(2)            <------NtERF2        ------>NtERF2                          --------->HSFB2a(2)                ------>NtERF2       ------>NtERF2                   --------->ARR11(3)    <---------HSFB2a(2)<---------RAP2.3(1)  --------->RAP2.6(2)                   <-----------ARR10    ------>ZmHOX2a(2)   ------>NtERF2       <---------DEAR3(1)                   --------->GLK1(2)    <---------LBD16    <---------DEAR3(1)   --------->DEAR3(1)                   <---------ARR11(3)  <------ZmHOX2a(2)  --------->At4g35610   <---------RAP2.6(2)                  --------->CCA1(1)   --------->ARR14(2)  <---------LBD16  --------->ARR14(2)                  --------->RVE1(1)   <---------ARR14(2)  <---------At4g35610  --------->ATERF1(1)                --------->AHL20(2)----------------->AGL2 <-----------RAV1(1) <---------DEAR3(1)     -       ----------->GT1    <---------HSFB2a(2)          ----------->RAV1(2) --------->MYB52(1) -------   gattttgaaatgtaaaaaaaaaatcttactagaaaatccagatcgggaaacacttacttctgcggcgaggtattcaagaacggcggccatgtaaaccgga  24133200                             <----------DOF2    <---------ALFIN1         ------>ZmHOX2a(1)    --------->AtMYB61 <---------ARR11(1)   --------->MYB46(3) --------->ARR14(2)  <xxxxxxxxxxxxxxxxsmallRNA(i) --------->AtMYB61    <---------ARR14(2) <---------ALFIN1     <-----------ARR10 --------->DEAR3(1)  <---------CCA1(2)<------ZmHOX2a(1) -LBD16            <---------ANAC58  --------->ANAC46   <---------ALFIN1 -------->MYB46(3) <---------ANAC58<---------LBD16    >>>>>>>>>>>>>>>>>LFY                       ---- -->LBD16    --------------------->WRI1--------->ARR14(2)                    <----------DOF2     <---   gcaccaccaccaagtctctgagcgtatcgtcctttcttcaggaaacgagtgattcttcccactgggaattgaagaccggctttcatcgatttcgaaaccg  24133300              <------NtERF2           <---------ZAT18           --------->ZAT18                                  <---------ARR14(2)       ====================RAV                            <---------MYB46(3)       <-----------RAV1(1)                              <---------MYB52(1) <------MYB46(1)               ------>ZmHOX2a(1) <----------DOF2 <------MYB83----------->RAV1(1)                 <---------DAG2 ----->ARR14(2)     <---------MYB46(3)  <----------DOF2--------->LBD16    <-------GAMYB ------ARR14(2)<-----------RAV1(2) ---------->DOF2   <---------LBD16    <---------TOE1(3)          <-   atttggtttttggggcaccaggtggttttcttcctccgaaagctttcttcacttttccggtggattccattgctacggttatcgattactgaaattgaga  24133400                                              *TSS                                          <---------TOE1(3)                                          <---------TOE2(3)                                         ---------->DOF2                               --------->CCA1(2)                              --------->ARR14(2)                 <-----------TBP                              --------->ARR11(3)      <---------ZAT14                              <---------ARR11(3)    <---------ZAT18           ---------->DOF2    <---------ARR14(2)    --------->ZAT18<---------AHL20(2)             <-- --------ZAT14  --------->MYB52(1)      <---------AHL20(2)     --------->ICU4        ---------->DOF2<   gtttagagagattgaaagtatcggaagttgaagatttgtgatttaaagttgaagggtactctgtgatatttataggtaaatgaaaaaaaaagaagggaga  24133500                                                         --------->ANAC46                                                         <---------O2                                                         --------->O2             --------->DAG2                                                        --------->LBD16          ---------->DOF2                                                      ------>ZmHOX2a(2)       --------->YAB1                                                     <------ZmHOX2a(2)       <---------ATHB12                                <---------MYB46(3)  --------->ARR14(2)      ------>MYB83          <---------MYB52(1)   --------->ALFIN1     <---------ARR14(2)     --------->WOX13(1)     <-----------GT1          --------->At5g28300 --------->ANAC58       --------->MYB46(3)   <---------YAB1           <---------DEAR3(1)    --------->ANAC58     <<<<<<<<<GT-1 ----ZmHOX2a(1)          <---------ETT(2)    --------->DAG2            <-----------GT1       <------- ---------YAB1           --------->ETT(2)   ---------->DOF2----------->HVH21------>MYB46(1)  <-------   ggattattatccgttggatttagtctatcgacggtggatgttcaaataaagcacgatccgcgtgactatgtattaaccaatcaaaaagaggtatgctttt  24133600      ------>NtERF2---------->ID1      ----------->RAV1(1)     --------->DEAR3(1)    --------->RAP2.3(1)                                                          --------->ZAT6   <---------ATERF1(1)                                                       <---------MYB52(2)   <---------RAP2.3(1)                       <---------DAG2           <---------ANAC58   <---------DEAR4(2)                        <----------DOF2          <---------ANAC58             <- --DAG2<------NtERF2      --------->AHL20(2)<---------ANAC58        <---------AHL20(2)             -- ---DOF2        --------------->AtSPL8      <---------ANAC58        --------->ARR11(3)       <-------   tgaaacggcgccagtttttttgtagcattttaaaagtttagcgcttgctttattttgggtttttggataatttcttgcaacttacactaattttcggtag  24133700                                                                           --------->ICU4                                                    <---------ANAC58     ----------------->AGL1                                                    <---------ANAC58     <---------------AGL15                                                  <---------YAB1         --------------->AGL15                                                --------->YAB1          ----------------->AGL1         <<<<<<<<<MYB98                         -------->HAHB4          <-----------------AGL1   --------->AHL20(2)                          --------->ICU4           ----------------->AGL2   --------->YAB1                              <---------ATHB12         <-----------------AGL3   <---------AHL20(2)               <---------AHL20(2)                  <-----------------AGL2   ---- --------AHL20(2)           <---------WOX13(1)<---------TOE2(3)         <-----------------AG     <--- ------->AHL20(2)         --------->ATHB12  <---------AHL20(2)      ---------->DOF2              <--- --MYB52(1)      ---------->DOF2    --------->AHL20(2)           <----------DOF2                 ----   attaattatatgttaaatgtaaagttagtcattgacatttaaatgtttaatgatgcttctcaagagtctttgaagccctaattggaaaacaatgaacaat  24133800                                    <---------CCA1(1)                                   <---------ARR11(3)                                   --------->ARR11(3)       --------->YAB1              --------->AHL20(1) ----->AHL20(2)                    <---------AHL20(1)                                ---------->DOF2 ------ARR11(3)         <---------YAB1                                             --------->YAB1 ------AHL20(1)       --------->YAB1<---------RVE1(1) <---------YAB1           ------>ZmHOX2a(1) ----->AHL20(1) <-----------GT1---------->DOF2    <----------DOF2 --------->YAB1  <---------ATHB12   attttagaatcaaaagattaacaattatacttataaagatattttggggtcgcattatgttttgacattcacaagggagtcctaatcaaaagtagcctaa  24133900  Previous    Next  AGI:  At5g59870.1    Description:  HTA6; DNA binding. Identical to Probable histone H2A.7 [Arabidopsis Thaliana] (GB:Q9FJE8); similar to HTA12, DNA binding [Arabidopsis thaliana] (TAIR:AT5G02560.1); similar to HTA6-sGFP [Gateway adapted binary vector pCGTAG] (GB:ABD16410.1); similar to HTA6-EYFP [Gateway adapted binary vector pFYTAG] (GB:ABD16408.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone H2A; (InterPro:IPR002119) Range:  from: 24132607    to: 24133446    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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