Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              <---------ICU4            --------->YAB1            --------->ATHB12           <---------ATHB12   <---------ICU4   --------->ATHB51   <--------ATHB1   -------->HAHB4   --------->ATHB12                        --------->AHL20(2)  <---------YAB1             <---------AHL20(2)  --------->ICU4 <---------TOE2(3)        <---------WOX13(1)  <---------ATHB51    --------->YAB1   <---------YAB1              <---------ANAC58 -------->YAB1  --------->YAB1         <---------AHL20(2) <----------DOF2     ------->TEIL ----->YAB1--------->ICU4    --------->AHL20(2)     --------->ANAC46       <---------YAB1 --->AHL20(2)--------->TOE2(3)<---------AHL20(2)  --------->ZAT6   <---------ANAC58 <---------ATHB12   cataataattgaaatcattaacaatgagaaatttttttgttttaattgaataacacaaaacttttaatgacttgagtatgaatccaataacccaaaattt  24128200                                         --------->ANAC46                                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)              ----------->RAV1(1)                  <---------YAB1<xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)             --------->YAB1            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                      --------->ATHB12        <xxxxx   <---------GLK1(2)      --------->TOE1(3)        >>>>>>>>>MYB98     <---------YAB1    --------->GLK1(2)   <---------ARR14(2)     --------->TOE2(3)    --------->TOE1(3)  --------->ARR14(2)   <---------GLK1(2)   --------->ARR14(2)    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<-----------GT1  xxxxxxxxxxxxxxxxxxxxxxx   <---------ARR11(3)   <---------ARR11(3)     --------->TOE2(3)  <---------ARR14(2)   <---------ARR14(2)   --------->ARR11(3)   --------->ARR11(3)     <----------DOF2    --------->ARR11(3)   --------->ARR14(2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)  --------->ZAT6    <----------DOF2 <---------WOX13(1)    ------   atgcagattttagaatacttcttataaatcttaaatgaataacacaaaactttaacatacttttaacaaatcttgattgaataacaacagattctacatg  24128300                                                                                   <---------AHL20(2)                                                                                   <---------YAB1                                                                               <---------DAG2                                                                               <----------DOF2                                                                             ------->TEIL                                                                          <---------ANAC58                                                <---------MYB52(1)        --------->ANAC55(2)                                         --------->MYB46(3)               <---------ANAC46                                       --------->YAB1                     <---------ANAC58         --   --------->AHL20(2)       --------->YAB1------->GAMYB                  --------------->AtSPL8    <- xxxxxxxxxxxxxxxxxsmallRNA(si3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   --------------->AtSPL3    -- >smallRNA(le3)            <---------ATHB12-------->P              <---------GLK1(1)               <- ----->HVH21       <----------DOF2    <---------ATHB12   <-----------GT1<---------TGA2(2)         <--   acattttaaatcactaaaactcttttgaaatcataaaccaataacaaccccttagttttttactatttgaattctgacgtacttttttattagttgaatt  24128400                         --------->TOE2(3)                 --------->YAB1                              <---------AHL20(2)                <---------AHL20(2)                           --------->AHL20(2)                --------->AHL20(2)                    --------->GLK1(2)              --------->TOE2(3)                       <---------ARR11(3)                            - ------------->AGL15--------->ATHB51                  --------->ARR11(3)                            - --------HSFB2a(2)  <---------ICU4             ----------->RAV1(1)      --------->At4g35610         - ------->HSFB2a(2) --------->ICU4              <---------ALFIN1<------------CBF                   <-- --------------AGL15--------->AHL20(2)       ----------->RAV1(1)      <-----------RAV1(2)         <-- ---------------AGL3<---------AHL20(2)      --------->PCF2  ----------->TBP                    <-----   tctataaatgagaaaacattaattatttcttaatctttgaacttaagccccacaaaaatcttataaattgggacagatggactagataacaagcgtttca  24128500                                                                                  --------->TOE1(2)                                                                                  --------->TOE1(3)                                                                                  --------->TOE2(2) ----->MYB83          <-----------GT1                           <----------DOF2  --------->HSFB2a(1) ------->P   --------------->AGL15                        <---------ALFIN1       <---------HSFB2a(1) ----->MYB46(1)    --------->ANAC55(2)                 --------->AtMYB61  <---------ANAC46 -------MYB111(1)  --------->ANAC46      <----------DOF2<-----------HVH21 <---------ANAC58 -------MYB46(2) ----------->TBP  <-----------GT1 *TSS--------->MYB46(3)  <---------ANAC58 ------GT1<-----------GT1  <----------DOF2       --------->HSFB2a(2) <---------AtLEC2   cctactccaaaatttccctataagtaactctttttgtaacctccttttcttcccaaaccatcactccttttgcattgtgtgaaaccttcgagttttctct  24128600                                                                                       --------->ARR11(3)                                                                                       <---------ARR11(3)              --------->MYB46(3)         <---------AHL20(2)                        ---------->DOF2              <------------MYB.PH3(2)    --------->AHL20(2)                     --------->At5g28300              <---------MYB52(2)       <---------YAB1                       --------->LBD16       ---------->DOF2              --------->ICU4                         --------->LBD16     <---------HSFB2a(2)            <---------YAB1                        <---------LBD16      <-----     --------->HSFB2a(2)        <---------GLK1(2)         <---------ARR11(3)------>NtERF2 <---------YAB1   tcatcttctcaaagtaacaaactttctccaaacagattattattaaaacaatctcatcaagaactacgatgaaattcccggctgtaaaagttcttattat  24128700                                            <---------ANAC58                                            <---------ANAC46                                            <---------ANAC58                                           <-------TEIL                                         <---------GLK1(2)                                         <---------ARR14(2)                                         --------->ARR14(2)                                       --------->LBD16                <---------------AGL15                                     <---------LBD16                  --------------->AGL15                                     --------->LBD16            ------->TEIL       <----------DOF2                                    ------->GAMYB    --------->ZAT14 <-----------------AGL3                                    --------->DEAR3(1)  --------->ANAC46       <---------GLK1(2)    < ------GT1        <----------DOF2  --------->MYB46(3)--------->ARR14(2)  <---------YAB1 <---------YAB1   ctctcttctcatcacatcttctttgttcatactctcaaccgcggattcgtgtaagtatacacaatgcattttcttattttagatacttttctcattagaa  24128800                                                                       <---------ARR11(3)                                                                       --------->ARR11(3)              <---------AHL20(2)                                      <---------At4g35610             <---------AHL20(2)                                  =======================bZIP_DOF <---             <---------AHL20(1)     <---------AHL20(2)           --------->O2                    <---             --------->AHL20(2)     --------->AHL20(2)           <---------O2                  ------       --------->YAB1          <---------WOX13(1)  --------->LBD16<-----------HVH21         ---------       --------->TOE2(3)    <---------YAB1       <---------LBD16 --------->TGA1a       <----------ID1    <----------DOF2         --------->ICU4      --------->AtLEC2 <---------TGA1a     <------ZmHOX2a(1) -----------GT1          <---------YAB1 <---------ICU4 <------ZmHOX2a(1)     ---------->DOF2---------   atttagctttcttaataaaattgtattgtgatgatggattaattagcaccatgcggaggaaaatgcaacgtgagatgttcaaaggcaggaagacaagata  24128900                                     --------->ICU4                                ----------->GT1                          --------->HSFB2a(2)                         <---------ANAC46 ---MYB46(1)             <---------ANAC58                                   ------->TEIL ---MYB83           <-----------RAV1(1)                      <---------HSFB2a(2)              ------- --->CCA1(2)     <---------AHL20(1)  <---------YAB1          --------->HSFB2a(2)          --------->LBD16 >ANAC58   ----------->GT1<---------HSFB2a(2)             --------->ICU4 <---------YAB1<---------At5g28300 >ANAC58   --------->YAB1<---------ANAC58        <-----------HVH21  ---------->DOF2   <-----------GT1   ggtgtctcaagtattgtaatatatgttgcgagaagtgtaactattgtgttccttcaggcacttatggaaacaaagatgaatgcccttgttaccgcgatat  24129000                                                                                >>>>>>>>>ARR1                                                                --------->ARR14(2)               ------->PIF5                                     --------->AHL20(1)               <-------PIF5                                     <---------AHL20(1)              --------->TGA1a                      ------>ZmHOX2a(1)            >>>>>>>>>ARR2              --------->ANAC58                     <---------YAB1             <---------TOE2(3)              --------->ANAC58                    --------->TOE1(3)           <---------YAB1              <---------TGA1a                     --------->TOE2(3)      ----------->GT1       =================bZIP_DOF                <---------YAB1  <---------ARR14(2)       ---------->DOF2                         <-----------GT1  <---------ARR11(3)  --------->GLK1(1)                       <---------YAB1  --------->ANAC46    <---------TOE1(3)     - <---------ARR11(3)                       <---------TOE2(3)     --------->ARR11(3)    <---------ANAC58 --------->ARR11(3)                       <---------TOE1(3)     <---------ARR14(3)    <---------ANAC58 -->CCA1(2)  <-------TEIL  ------>ZmHOX2a(1)<---------GLK1(2)   --------->ARR14(3)  <---------YAB1---   gaagaactccaaaggcacgtccaaatgtccttgatcatgttcttaagattatccttatagacacaatatcttgaaatgttaagattgtgcttgatgccta  24129100  Previous    Next  AGI:  At5g59845.1    Description:  gibberellin-regulated family protein. similar to gibberellin-regulated family protein [Arabidopsis thaliana] (TAIR:AT2G39540.1); similar to snakin-1 [Solanum tuberosum] (GB:CAC44032.1); contains InterPro domain Growth factor, cystine knot (InterPro:IPR002400); contains InterPro domain Gibberellin regulated protein (InterPro:IPR003854) Range:  from: 24128550    to: 24129246    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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