Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             <---------ANAC55(2)           --------->ANAC58           --------->ANAC46        <---------ARR14(2)        --------->ARR14(2)                               <-----------GT1    --------->SPL7                                  <---------ANAC58    <---------TOE1(2)                               <---------ANAC58  <---------SPL7                                    --------->ANAC55(2)  --------->TOE1(2)  ------->TEIL                   <---------ANAC55(2)                      <------ZmHOX2a(1) ---------------AtSPL3       ------>ZmHOX2a(2)      <---------ANAC46             <---------YAB1------ -------------->AtSPL3     --------->ARR11(3) <---------AHL20(1)               --------->YAB1======== -------TEIL         <---------YAB1           <---------AHL20(2)   ------->TEIL--------->AHL20(2)   - --->DOF2  --------->ANAC58<---------ARR11(3) --------->AHL20(2)--------->ANAC55(2)    ----------->HVH21   ggctcgtacgaatacgcaaaatgaatattgatctccatatacaaacattttatttcgtattactatatgtaacttagaaaattataaaactgacaggaat  24107500                                     <---------RVE1(1)                                     <---------CCA1(1)                                    <---------ARR11(3)                                    --------->ARR11(3)                                   --------->YAB1                                  <---------YAB1                             --------->ANAC55(2)                                  ------->GAMYB   ---                             <---------ANAC58                            --------->HSFC1(2)       ---  --------->ANAC46           <---------ANAC58                            <---------HSFC1(2)       <--  --------->ANAC58         <---------AHL20(2)                            <---------HSFB2a(1)     ----  --------->ANAC58    <------ZmHOX2a(2)                                  --------->HSFB2a(1)   ------ --->GLK1(1)         <---------ARR11(3)                  --------->ARR14(2)     <---------At4g35610 ============================HOX2a_HOX2a      --------->YAB1           <---------GLK1(2)   --------->ANAC46 -------->MYB52(1)   --------->ARR11(3)   <---------YAB1 <---------ARR14(2)     --------->At4g35610   tcaaacggaacagaagtttataagatcatttacttgatgatattttgatcaaaatagagtatatgaaaatacagaaacttccaactgacttacacaaaaa  24107600            <-----------GT1              <-----------GT1 ------>ARR11(3)                       <---------YAB1                                      --------->ZAT14 ------>AHL20(1)                     <---------ICU4                                 --------->TOE2(3) -------ARR11(3)  <---------AHL20(2) <--------HAHB4                 <---------MYB52(1)---------->DOF2 ----->AHL20(2)  --------->AHL20(2) <---------YAB1                 <-------GAMYB    <---------MYB59 --->AHL20(2) --------->ZAT6        --------->ICU4    ----------->GT1              <---------ANAC55(2)   tatataccaatatttaacaataaatagaccaaaatggcattattatccaattcgttttgaaaaattgagcgttattctattgaatacctaaagtatagtc  24107700                                                                                          <---------AHL20(2)                                                                                          <---------ATHB51                                                                                    ----------->GT1                            --------->GLK1(2) <---------AHL20(2)                --------->ANAC58                        --------->YAB1  --------->TOE2(3)                       --------->ANAC58                --------->ARR11(3)    ------>MYB83                            ---------->DOF2                <---------ARR11(3)    ------>MYB46(1)                   ----------------->AGL2  -----            ---------->DOF2<---------GLK1(2) --------->AHL20(2)       --------->ANAC46    --------->AHL20(2)   tagttcaaaaaaaaaaaagaacttaataagaatctctaccaatcttataaaattttcaaaatttgaaaacatactccataaaaagccagaaaataattca  24107800                                    <------MYB83                                    <------MYB46(1)                                <---------MYB46(3)                                --------->MYB55(2)                     <---------AHL20(2)                    <---------AHL20(1)                    --------->AHL20(1)                    <---------AHL20(2)                      --------->ANAC58               --------->AHL20(2) <--------P<---------DAG2<------NtERF2<---------ARR14(2)          <------NtERF2      <----------DOF2<----------DOF2 --------->ANAC58               --------->ANAC58   <---------ICU4   --------->AHL20(2) <---------GLK1(1)<---------ANAC46 <-------TEIL      --------->ANAC58 ---->WOX13(1) <---------AHL20(2)<-------GAMYB     ----------->RAV1(2) --------->ARR14(2)---------->DOF2   attagtcatggccgaatttaaataaaattgactttggttggaaatgctttttctactggcgcaagtaagagccgatacatgtttatatcagaaaagccag  24107900                                                                     <---------ARR11(3)                                                                     <-----------ARR10                                         *TSS            ------>ZmHOX2a(1)                                 <---------ANAC46    --------->ARR14(2)                               <---------ANAC46      <---------ARR14(2)                            <-----------RAV1(1)   --------->ANAC58   --------->ARR11(3)       <------                       <-------TEIL      <----------DOF2--------->TOE2(3)         <----------DOF2        <------------CBF    <---------MYB46(3)    --------->ANAC58  <---------GLK1(2)  ------>ZmHOX2a(1)   aagagagagagattgagagcaaagtttcatttgttgtgtagccctttgtctctcgcatcctcatttttcaaaatctcactctctctttcctctctgcttt  24108000        --------->HSFB2a(2)               <----------DOF2        <---------HSFB2a(2)             ---------->ID1    <----------DOF2               <---------ARR11(3)   <---------ANAC58               <---------GLK1(2)        ------->GAMYB                 <----------DOF2   <---------ANAC58               --------->ARR11(3)     --------->At4g35610 ---------->DOF2 ----DOF2                     ---------->DOF2        --------->TOE2(3)    ----------->RAV1(1)       -   catttgctttctataaatccaaactcttaaacaaaagattttgtctttccatcaacatcaactccctcataaactcccacaaagactctcactttaaaac  24108100                                                                    --------->DAG2                         <----------DOF2              --------->ANAC46                        <------------------------ANAC81  ---------->DOF2                          ---                     ---------->ID1                   --------->ANAC58                           ----          <---------ANAC58                        <---------HSFB2a(2)                            <---          <---------ANAC46     <----------DOF2    --------->HSFB2a(2)                          ------          <---------ANAC58   ---------->ID1  <---------DAG2        ---------->DOF2    <---------ZAT14        --------------------->WRI1           <----------DOF2 <----------ID1          <---------ZAT6 ----->ZmHOX2a(1)    <---------CCA1(2) <----------DOF2--------->ANAC58 <------ZmHOX2a(1)<---------ZAT14   tccttcactacttcgtgttcttcgtctctttttctttttttctttcacttttccataagcaaagaaacaaaaaggatgagttcaagagtgttcagagcaa  24108200                                                                    ------->TEIL                                        ------>MYB83                --------->ARR14(2)                             <------ZmHOX2a(2)                      <---------ARR11(1)                             --------->CCA1(2)                      <---------ARR14(2)                            <---------ARR11(3)                      --------->GLK1(2)                            --------->ARR11(3)                      <-----------ARR10                            --------->AGP1 --------->ANAC46        <---------GLK1(2)                            --------->ARR14(2)                     <---------ARR14(1)                           --------->GLK1(1)                     ------->GAMYB                           <---------GLK1(1)                    ----------------->AG                         <------ZmHOX2a(1) --------->ANAC58     ----------------->AGL1                       --------->LBD16  -------->P              <-----------------AGL2                      =============================RAV          <-----------------AGL1                      <---------LBD16   ------>MYB46(1)       --------->ARR14(2)                      <-----------RAV1(2)  --------->ANAC58   <---------ARR14(2) -------->RAV1(1) --------->PCF5       ----------->RAV1(1)    --------->MYB52(1) ----->REM1(1)  <------MYB83<---------ARR14(2)          ------>NtERF2                              <- ------ALFIN1   <------MYB46(1)       --------->AtMYB61----------->HVH21                           -- ----->RAV1(1) --------->MYB59  ---------->DOF2        <---------ETT(1)                       -------   caccagataacaactatttggtccccaggagatccaaagaccaacaagacaccagtcccgaccgtaaccgaatctggtctgagcctcgtcttaaacccgt  24108300                                             --------->At4g35610                                             --------->ZAT2                                             <---------ZAT2                                         <-----------HVH21                                    <------NtERF2         <---------HSFB2a(1)       --------->LBD16         --------->HSFB2a(1)       <---------RAP2.6(3)    <---------ICU4       ---------->DOF2            --------->HSFB2a(2)    ------>ZmHOX2a(1)     --------->LBD16              --------->LBD16     ------>MYB46(1)   <---------LBD16                --------->RAP2.6(2) ------>MYB83 --------MYB52(1)                <---------LBD16 <---------WRKY18(1)                                - ------->DOF5.7(2)               ----------------->AGL1 --------->TOE2(3)             <---------TOE1(2) -->ANAC46                      ------>NtERF2<---------At4g35610        <-----------GT1        <-----   cgttaaccggaaagtcccagtcgtctattatctctgccggaatggtcagcttgaccatcctcatttcatcgaagtcactctctcttcccacgatggtctt  24108400  Previous    Next  AGI:  At5g59790.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G46110.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67325.1); contains InterPro domain Protein of unknown function DUF966 (InterPro:IPR010369) Range:  from: 24107941    to: 24110394    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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