Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           <---------YAB1                                                                                       --------->YAB1             <---------ANAC58                                                 <---------ATHB12             <---------ANAC46                                      <---------YAB1    <----------DOF2         <---------ANAC58                           <---------ANAC46          <---------ATHB51   <---------YAB1                                   <---------ANAC58          --------->ICU4    -----  <---------ARR11(3)                  <---------ANAC46         <---------ANAC58<--------ATHB1  ------  --------->ARR11(3)                  <---------ANAC58         <---------ANAC46<---------ICU4 ------- -TOE1(2)<---------ANAC58   <---------YAB1 --------->YAB1      <---------ANAC58-------->HAHB4 ------- -------AtSPL8     ---------->DOF2    <---------ANAC58  <---------YAB1      --------->YAB1<---------ICU4 --RAV1(2)   <---------ANAC58 ---------->DOF2       <---------ANAC58--------->YAB1  --------->TOE2(3)   ctaatatcattgtttgcgtataaaagttttataaaagttttcgtataagaattgtcgtataattgtcgtataatagtctaataattcctttataattcct  24042800                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                 <---                                                                                                 <---                                                                                                 <---                                              --------->ANAC58                                -------                                              --------->ANAC55(2)                            <<<<<<<<            --------->TOE2(3)                 --------->ANAC58                               <<<<<<<<           ----------->GT1                    <---------ANAC55(2)                            <<<<<<<<         --------->GLK1(2)       <XXXXXXXXXXXXXXXXXXXXMIR851-3P                            <------MYB46(1)        <---------GLK1(2)       <------MYB46(1)                                            <------MYB83 ->ZmHOX2a(1)               <-----------RAV1(1)                      <-------GAMYB<---------YAB1 ---- --->TOE2(3)--------->TOE1(3)   <---------MYB46(3)                  <---------MYB46(3)  <---------ANAC58 ---------->AGL1           <---------YAB1 <-----------HVH21 --------->ARR11(3)<------ZmHOX2a(1)------ ---------->AG ---------->DOF2  <------MYB83  <---------ANAC46      --------->MYB52(2)  <---------ANAC58   aaatagataagaatcgttaaaccgagactattgttggttttgtttgtcacgtataagtgaatggtcttgtttgttgtgaaggagatgatagcttggtcaa  24042900 ------>ATHB51 ----->ATHB1 -------ICU4 ------>ATHB12                                                                            --------->HSFB2a(2) ------ATHB1                                                                              <---------HSFB2a(2) ------ATHB12              <---------WOX13(1)  <---------ANAC58                <---------ANAC55(2) ------YAB1              --------->ATHB12      <---------ANAC55(1)             <---------ANAC55(1) ------ATHB51           <---------AHL20(2)     <---------O2                    <---------ANAC46   --- ----->ATHB5         <<<<<<<<<<MYB80           <---------ANAC46                --------->ANAC55(2)<-- <<WRKY38           <------MYB46(1)            <---------ANAC55(2)             <---------ANAC58   --- <<WRKY43           <------MYB83   <---------LBD16                             <---------ANAC58   <-- <<WRKY26           <---------MYB46(3)         ----------->GT1               <-----------GT1     ---- ----->ICU4        <---------TOE2(2)           <---------ANAC58      --------->ICU4     --------->AtLEC2 --->WOX13(1)     <---------MYB52(1) --------->LBD16   --------->ATHB12  <---------AHL20(2)--------->LBD16   ttattggtttattagaaaacgttggtttaattggttaaccggagtagtaacgtgaattgatttgttgtgtcatattgaattacgtcttccatccagaaat  24043000                                                                                                    -                                                                                                    -                                                                                                  ---                                                                                                 ----                                                                                                -----   --------->AHL20(2)                                                                           -----   <---------AHL20(1)                                                                           -----   <---------AHL20(2)                                    --------->At4g35610                  ------- ------>AHL20(2)                                   <---------ARR11(3)                       ------>ZmHOX2a(1) -------AHL20(2)                <---------AtLEC2   <---------AHL20(1)                      --------->TOE1(2) ------>AHL20(1)         <---------TOE2(3)         --------->ARR11(3)                    <------ZmHOX2a(2) -------AHL20(1)         <---------TOE1(3)     <------ZmHOX2a(1) --------->ARR11(3) --------->GLK1(2) ----->AHL20(2)     <---------AHL20(2)--------------->AGL15  ---------->DOF2   ---------->DOF2-------   tttattttattttctcaactatatttttaggttttcatgtcttcaaataggaatatatatgctgaaagacattggatgtatgaaagaatcgatcctacaa  24043100         --------->YAB1 <---------ATHB12 ----->MYB83 ----->MYB46(1)             <------------CBF ------>AtMYB61            --------->ATHB12                                                      ---- ----->MYB46(3)            <------ZmHOX2a(1)                                                    <---- ---->ANAC58             <---------TOE2(3)                          <---------YAB1              <---- ---->ANAC46          <---------YAB1                   --------->DAG2                  <---------DAG2 ---->ANAC58    <----------DOF2       --------->AHL20(2)         <---------MYB52(1)    <----------DOF2 -->REM1(1)  --------->ANAC58         <---------AHL20(2)        <----------DOF2 --------->AHL20(2) -->MYB46(3) --------->ANAC58    ------------>CBF     ---------->DOF2        ----------->GT1    <----   ccaatcgagtatcacaagctttttatgaaggattggacaattttttgaagtttgcaaaaagtcagcctttatttttggagaataaaaaacttttttgtcc  24043200       --------->ALFIN1     <---------ANAC55(1) ----->LBD16 -----ANAC58                                                    ---------->DOF2 -----ANAC58        <------ZmHOX2a(1)             <---------ALFIN1<---------TOE2(3) -----ANAC46      *TSS   <----------ID1         ----------->RAV1(1)       <---------YAB1   gtgtattaagtgtggaaatggaggaagacaacaagaagaacacatcgtggcaacacatttgttcaacaaaggttttatgcttaactactgggtttggact  24043300                                                                                         <---------ANAC46                                                                                     --------------->AGL15                                                                                     <---------------AGL15                                                                                    <----------------                                                                                    -----------------                                                       <------MYB83                 -----------------                                                       <------MYB46(1)              <----------------                                                      --------->MYB59               -----------------                    --------->TOE2(3)               <---------MYB52(1)              ------>ZmHOX2a(2)                   ----------->GT1                <---------ZAT6                    -----------------               --------->YAB1                  --------->ARR14(1)                   <----------------              <---------YAB1                  <---------ARR11(3)                   <------ZmHOX2a(2)             <---------AHL20(2)               --------->ARR11(3)                  --------->ARR14(2)             --------->AHL20(2)               --------->ARR14(2)                  <---------ARR14(2)            --------->YAB1                    <---------ARR14(2)                <---------MYB46(3)  <           <---------YAB1                   ----------->ARR10         --------->ANAC46------>ZmHOX2a(1)   tctcatggggaagattataatatgttaataaacaacaattctgaagaagatactgttaggtttgagtctcacacagaaccagtggatccttatgtggaaa  24043400                                                          ------>ZmHOX2a(1)                                                        ------>ZmHOX2a(2)                <---------------AtSPL8                 <------ZmHOX2a(2)   <-----------RAV1(2)                                <---------ARR14(3) <-----------HVH21                                    <---------ARR11(3) -AGL1          <---------------AtSPL3                --------->ARR14(3)             <---------RVE1(1) >AGL1        <------MYB83                            --------->ARR11(3)             <---------CCA1(1) >AG --------->At4g35610                              --------->ARR14(2)            <---------ARR11(3) -AGL3        <------MYB46(1)           <---------At4g35610                         --------->ARR11(3) >AGL2    ------->TEIL     --------->YAB1             <---------ARR14(2)          <---------YAB1 >AGL3  <-------TEIL--------->ZAT14     --------->At4g35610       <---------TOE2(3)--------->YAB1 -AG <---------At4g35610 --------->GLK1(2)          ----------->ARR10     --------->DAG2       ------ ---------bZIP60(1) <---------ZAT14   <-----------RAV1(2)<---------MYB59 ---------->DOF2       <-----   tggtgtcagatgcatttggtagtacagaatcagagtttgatcagatgagggaagaagatcctaattttgaggcaaaaaagttttatgatattttggatgc  24043500                                                                                           ----------                                                       <---------ZAT2                --------->AHL20(2)                                                       --------->ZAT2                --------->ATHB51                                                 ------>ZmHOX2a(1)                   <--------ATHB1                                                --------->TOE1(3)                    <---------AHL20(2)                         ---------->DOF2        --------->TOE2(3)                    <---------ICU4                     ------->TEIL  <----------DOF2     --------->At4g35610          <---------YAB1             --------->YAB1     --------->ARR11(3)     <---------At4g35610          --------->ICU4 --->At4g35610    <---------WOX13(1)        <----------DOF2      <---------YAB1   --------->YAB1 ----At4g35610 <---------YAB1   <---------ARR11(3)  <---------At4g35610       ----------->GT1   tgcaaaacaacctatttatgatggatgtaaagaaggtctttcaaaactttccttagcagctcgacttatgagtttgaagacggataataatttgtctcaa  24043600                                                  --------->MYB46(3)                                         ----------->HVH21                                       <---------ANAC58                                       <---------AtLEC2                                  <---------ARR14(2)  ------->GAMYB                                  --------->ARR14(2) <---------MYB52(2)     <------ZmHOX2a(2)                               --------->YAB1----------->GT1           <---------YAB1                         <---------YAB1<---------ANAC58              --------->YAB1 >ID1                <---------GLK1(2) <---------ANAC46    ---------->DOF2 --------->ARR11(3)  <-----   aattgtatggactcgattgctcagattatgcaagaatatttgcctgaaggtaacaactcaccaaagtcgtattatgagatcaagaagcttatgcggtctt  24043700  Previous    Next  AGI:  At5g59640.1    Description:  transposable element gene. CACTA-like transposase family (En/Spm), has a 5.1e-159 P-value blast match to GB:AAD55677 putative transposase protein (CACTA-element) transposon=""Shooter"" (Zea mays) Range:  from: 24043218    to: 24047998    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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