Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              <----------DOF2                                           --------->HSFC1(2)                                           <---------HSFC1(2)                                           --------->HSFB2a(1)                                      <---------HSFB2a(2)                                      --------->HSFB2a(2)                                     -------                                      --------->HSFC1(1)                      <---------At4g35610 ---                                --------->ANAC46                    <-----------GT1        --------->WRKY18(1) --------ARR11(3)              ------>ZmHOX2a(1) <---------ALFIN1----------->GT1          <---------- ------->ARR11(3)           ------>MYB83 <---------ARR11(3)     --------->DAG2--------->At4g35610 --- -------CCA1(2)             ------>MYB46(1)<---------HSFB2a(1) ---------->DOF2--------->ZAT2  ------- ---->YAB1             <---------ALFIN1  <<<<<<<ZML2       --------->TOE2(3)  <---------ZAT2---------   atatctctcttgggcatttcatcgaacaccttcctcgcatctagaactttcccacattcaacataaaaagttacaagcttagctgcaattctcgtcaagc  24030000                                                                 <---------MYB52(1)                                                                <-------GAMYB -->ANAC58                                                 --------->ETT(2) ------>ANAC58                                         <---------ARR14(2) -HVH21                                                --------->ARR11(3)                           < ------>ANAC58                              --------->ANAC46   <---------MYB46(3)                 --- -->ANAC58 <-----------HVH21            ------>ZmHOX2a(1)------>ZmHOX2a(2)                      <---- ->DOF2 --------->At4g35610             ========================HOX2a_HOX2a       ----------->RAV1(1)   gagcaataccagatgtcactaaatgagcatgaagcactcttcctctacaaaacagtcgatctcgaccgttggcttcgatgagttcaacataagaaccgat  24030100          ---------->DOF2       ------->GAMYB                                                          --------->LBD16      <---------------------WRI1                                             --------->ANAC46    --------->MYB52(1)                                                       --------->ANAC58 <---------ICU4                                                              --------->ANAC58 --------->YAB1                                                             <---------LBD16 ---------YAB1               <--------P                          <----------DOF2 ------>YAB1        <------ZmHOX2a(1)                ---------->DOF2  --------->YAB1       <--------P -----WOX13(1)--------->ARR11(3)       <---------AtLEC2          <---------DAG2 <----------DOF2<-----   tgataataaccgaaaagaactaggaacgatggtaagtttcttcatggataagaatcaaagcttcaaactttatcaaaacccgcattactgatggtagatt  24030200        ----------->GT1                                                                    --------->At5g28300    <---------ANAC46                                                                       <-------GAMYB    --------->ANAC58                                                                      -----------    <---------ANAC55(2)          ----------->HVH21                                    <---------SPL7    --------->ANAC58           --------->At4g35610                                  <---------------AtSPL8  --------->MYB52(1)        <---------AHL20(2)   --------->ANAC46                   <---------------AtSPL3 ----------->TGA1          --------->AHL20(2)    --------->ANAC58                   --------->ANAC46 ----------->HVH21--------->At4g35610            --------->ANAC58                 <-----------GT1   < ----GLK1(1)   ---------->DOF2 <---------At4g35610 *TSS                 <-----------GT1 --------->SPL7   tcagtgacggaagtaataaaagctcccaattttatctgacagagaacgaacaaggaagaacagagttagcgattataccagattaaacggtacggttaat  24030300                                                                                                  <--                                     --------->ARR14(2)                                           ---                                     <---------ARR14(2)                                          ----                                     <---------GLK1(2)        ------------>CBF              ---------        --------->GLK1(1)       --------->MYB52(1)   --------->DAG2        <---------At4g35610 ------   <---------LBD16   --------->At5g28300       ----------------->AGL1   ---------->DOF2     ---------  ------->TEIL      <---------MYB46(3)    <------------CBF  --------->GLK1(1)              ------->TEIL >GT1--------->LBD16----------->GT1--------->LBD16  --------->DAG2     <---------ATHB12 <---------ANAC55(2) ---------ZAT14 <------ZmHOX2a(1)<---------LBD16   ---------->DOF2 ------------>CBF     <---------YAB1   actgaaccggaaatcgaaggagcggttaaacaaaaaccggattcgattgtccaaaaagggggaattcaatccaatgaagcagagcaaattatgtatgcaa  24030400                                                                  <----------DOF2      --------->GLK1(2)                                         <-----------------AGL1     <---------GLK1(2)                                          ----------------->AGL1 -------ARR11(3)                                                <-----------------AG ------>ARR11(3)                                            <---------ANAC58 ----->REM1(1)          ---------->DOF2                     <---------ANAC58 >ANAC58          <---------ALFIN1                         --------------->AtSPL8 ----->RAV1(1)    --------->ANAC46            --------->At4g35610 <---------DAG2              ------>ZmHOX2a(1) >ANAC58        ----------->RAV1(1) <----------DOF2 ------>ZmHOX2a(1)              <---------LBD16   catcttcgattctgtctccaacaccacaaagtttcttcctttcgcatcatcttcctccaatttcgttcctttatcggataaattttctgggttttcctgt  24030500                                                                                --------->HSFB2a(1)                                                                                <---------HSFC1(2)                                                                                --------->HSFC1(2)                                                                                <---------HSFB2a(1) <                                                                               ------->TEIL         =                                                                               <-----------ARR10   <-                                                                               <---------ARR14(2)  <-                                                                               <---------ARR11(1)  --                                                   <---------------------WRI1  --------->ARR14(2)  <-               <---------ANAC46                 <---------LBD16               <---------ARR14(1)   --            <-----------RAV1(1)                --------->MYB52(1)        --------->GLK1(1)         --            <---------AtMYB61             <---------AHL20(2)        ----------->GT1          --------      <---------ANAC46               <---------MYB52(1)       ---------->DOF2 <---------CCA1(2)  ----   aacaagttgctgctatggtggagacattggtctcgcttcgttatataaacgacggagtagtatacaaagacggagaaatcgaatcttcgtaaccagagct  24030600           --------->ANAC55(2)   ------>ZmHOX2a(1) ------>ZmHOX2a(2) ==============HOX2a_HOX2a ------ZmHOX2a(2) ==============HOX2a_HOX2a --------ARR14(2) --------GLK1(2)                                           --------->ARR11(3) ------->ARR14(2)      <---------ANAC58                    <---------ARR11(3) --------ARR11(3)      <---------ANAC46                ---------->DOF2 ------->ARR11(3)      <---------ANAC58           --------->CCA1(2) ------->AGP1   --------->GLK1(2)                --------->ARR11(3) ->AGP1 ------>ZmHOX2a(1)                   ------>ZmHOX2a(1)     --------->YAB1 ------->ARR10 <---------GLK1(2)<-----------HVH21<---------ARR11(3)                  --------->ARR11(3)   agatcctctccttacgagattcttggtgtgtctccatcagcgactcctcaagatataaaaagagcttatcgtaaacttgctctgaaatatcacccagatg  24030700            <----------DOF2            <---------DAG2          <-------TEIL      <---------------AtSPL8      <---------------AtSPL3                                         <---------YAB1      --------------->AtSPL3                  <------ZmHOX2a(1)  <---------WOX13(1)      --------------->AtSPL8    --------->ATHB12            <---------AtLEC2  ---------->DOF2              <---------AHL20(2)       <----------DOF2  --------->YAB1    <---------TOE2(3)       <---------TOE1(3)    <--------P <---------ATHB12   <---------TOE1(3)       <---------TOE2(3)  ----------->GT1--------->MYB52(2)   tcaataaagaggtactttttttatggtttctatttcattggagtttaaggaattggagctttgtatggttgattataggtttgtttgtgtctaactcatg  24030800                                                     --------->ANAC58                                                     --------->ANAC55(1)                                                     <---------ANAC55(2)                                                     --------->ANAC55(2)               ------->TEIL                                                     --------->ANAC46        <----------DOF2                                                    <---------LBD16         <---------ANAC46                           <---------ANAC58        --------->MYB52(1)       <---------ANAC58                           <---------ANAC58        <-----------GT1          <---------ANAC58 ------->TEIL                          <---------ICU4 <----------DOF2         <----------DOF2--------->YAB1     --                    <----------DOF2    ---------->ID1--------->ANAC58  <-----------RAV1(1)  <--------   gaattggaactatgtatggatgctttaatgcttacatgtttgtctttactaattcacggaattgagactttgtatgttgctttcatatgtatgtgtatct  24030900  Previous    Next  AGI:  At5g59600.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to binding [Arabidopsis thaliana] (TAIR:AT3G49140.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81045.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 24028226    to: 24030251    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g59610.1    Description:  DNAJ heat shock N-terminal domain-containing protein. similar to DNAJ heat shock family protein [Arabidopsis thaliana] (TAIR:AT4G39960.1); similar to Heat shock protein DnaJ [Medicago truncatula] (GB:ABD33136.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623); contains InterPro domain Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609) Range:  from: 24030391    to: 24032297    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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