Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           ------>ZmHOX2a(2)        <------ZmHOX2a(2)       --------->ARR14(2)       <---------AGP1       <---------ARR14(3)       --------->ARR14(3)       --------->GLK1(2)       <---------ARR14(2)       --------->ARR11(3)       <---------ARR11(3)                                   --------->ARR14(2)      <------ZmHOX2a(1)                                   ----------->ARR10 --------->ALFIN1                                ------->GAMYB --------ZAT2                                   --------->MYB46(3) ------->ZAT2                                 --------->MYB52(1)                               ------ --------At4g35610                --------->GLK1(2)   <------NtERF2                            <----- ------->At4g35610                <-----------ARR10 <---------DEAR3(1)           <-----------RAV1(1) ---ZmHOX2a(1)                   <---------GLK1(2)--------->MYB52(1)           <---------At5g28300 <- -----RAV1(2)                ---------->DOF2<---------ATHB12<---------ARR14(2)<-----------GT1  ------   gagctggaggatctggagctatgtaacaagagaaagaatctctccaattaacagacggcgaagaactgtatagatcgaagttactgttgtatacaaattt  24014400             --------->ANAC58             --------->ANAC46         <-----------HVH21       <------NtERF2                        ------>ZmHOX2a(2)      ------>NtERF2                        <------ZmHOX2a(2)      <---------RAP2.6(3)                  --------->HSFB2a(1)      --------->LBD16                      <---------HSFB2a(1)     --------->RAP2.6(2)                   =============HOX2a_HOX2a     <---------ATERF1(2)                  --------->ARR14(3)     --------->ATERF1(2)                  --------->ARR11(3)     <---------RAP2.6(2)                  <---------ARR14(3)    --------->RAP2.6(3)                   <---------ARR11(3)    <---------ANAC58          <---------ANAC58                   --------->ANAC58    <---------ANAC58     <---------ICU4   --------->ARR14(2)     --------->ANAC58    <---------ANAC46     --------->ATHB12 <-----------ARR10     ------->TEIL    <---------LBD16     --------->ICU4    <---------ARR14(2)------>MYB83--------->TOE2(3) --->AHL20(1)--------->ANAC55(2)         <------ZmHOX2a(1)  ------>MYB46(1) ----AHL20(2)<---------ANAC55(2) <---------WRKY18(1)      --------->TOE2(2)                   ------- ----------RAV1(1)    --------->YAB1  <-----------RAV1(2) --------->TOE1(2)         --------->HSFB2a(2) --->AHL20(2)--------->ANAC58 <---------ANAC58   ------>ZmHOX2a(1)      <----------DOF2  ----------->GT1   tttgttgccggcatcacgcgagaagaatgatttcttgacctcaggatcttcctcgtgaaacctacgaaccccatctttaatctcttcaagaacgtttaaa  24014500                                                                                  ----------->HVH21                                                                          --------->ALFIN1                                                                         <-------MYC3                                                                         ------->MYC3                                                                        --------->TGA1a                                                                        <---------ANAC55(2)                                                                        --------->ANAC55(2)                                                                        --------->ANAC46                         --------->ARR14(2)                             <---------O2     <-------MYC3                         <---------ARR14(2)          <----------DOF2    --------->O2     ------->MYC3                       <---------HSFB2a(1)           =============================bZIP_DOF --------->WRKY12                       <---------HSFC1(2)         <-----------GT1       =============================                 <---------LBD16        --------->ANAC46                <---------TGA1a <---------ANAC46                ----------->RAV1(2)   <---------ALFIN1              <----------DOF2    --------->LBD16           --------->YAB1--------->GLK1(2)    <---------ARR14(2)    ==============bZIP_DOF--------->ALFIN1       --------->ATHB12--------->HSFB2a(1)--------->LBD16           <-----------HVH21  <------NtERF2      <---------YAB1   --------->HSFC1(2)--------->DEAR3(1)        <---------ANAC58  <---------LBD16 --->DOF2<---------WOX13(1)  --------->LBD16  --------->ARR14(2)   <---------ANAC58--------->ARR14(2)   ggaatactatgattgataacctggaagaatccccaattctccaccgcatatttgactttctctacgatggcttcacgtgaggctgtgtccgcgtggacgc  24014600                                                                <---------ARR11(3)                                                                --------->ARR11(3)      --------->ANAC46                                                               <---------GLK1(1)      <---------TOE1(1)                                                               <---------CCA1(1)      <---------TOE2(1)                                                               --------->GLK1(1)    --------->ARR14(1)                                                              --------->ARR11(3)    --------->CCA1(2)                                                              <---------ARR11(3)   --------->TOE1(2)                   ------>ZmHOX2a(2)                    <-------GAMYB      --------->MYB55(2)                  --------->GLK1(1)                    <------MYB83        <---------MYB46(3)                  <---------GLK1(1)                    <------MYB46(1)    <---------AtMYB61    <-----                  <------ZmHOX2a(2)                    <---------MYB46(3) --------->ALFIN1 --------->ARR14(2)                 --------->ARR14(2)                  <--------P<---------RVE1(1)   --------->ARR14(2)                 <---------ARR14(2)                <-----------RAV1(1)    <---------DEAR3(1)   ------                 --------->ARR11(3)              <---------ANAC58      <---------DREB2C(2) <---------ARR14(2)          --------->ATHB12                       <---------ANAC46      <---------DEAR3(1) <------ZmHOX2a(1)          --------->YAB1                    <---------HSFB2a(1)--------->RVE1(1)   <---------ARR14(2)         <---------YAB1     ----------->HVH21    <---------ANAC58   ----------->HVH21<-------TEIL---- ---------->DOF2 <---------ARR11(3)   --------->At4g35610   <---------TOE2(3)      --------->ARR11(1) ===========bZIP_DOF     <---------AGP1     --------->HSFB2a(1)--------->CCA1(1) ----------->ARR10   ttgcaaagtcgatgatagggatctctaggtctgataccgaagcagaaggtttcttgttggttaagatatcttgacggtggtggaagatacgaggaacttc  24014700                      <-----------HVH21                     <----------DOF2                  ------>NtERF2              <---------O2                         <----------DOF2                                ---           ----------->HVH21             <---------ANAC46                                       <----        <---------ANAC46                 <---------ANAC58                 --------->ARR14(2)    ----- ----ZAT14 <---------DEAR3(1)            <---------ANAC58                 <---------ARR14(2)    <---- --->ZAT14 --------->DEAR3(1) --------------------->WRI1               ------>ZmHOX2a(2)       <----- ----------------->WRI1   <---------ALFIN1    ---------->DOF2       <------ZmHOX2a(1)          ------   agtgattttagcgtcgacgaggcctttcacaccttgttttgtttcgtcgaaagctttacgctcgatgtaaggatcgaattcgatagagtttttggtcatc  24014800                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                   <-    --------->ZAT18                                                                                <-    <---------ZAT18                                                                                <- ------>ICU4                                                                                     <--- ----HAHB4                                                                      <---------TOE2(3)---- ---->YAB1                                                                  <------------CBF <------MYB83 -----ICU4                                                         ---------->DOF2   --------->ATHB12 ----YAB1       *TSS                                        ----------->GT1--------->ATHB12  <------MYB46(1) --->ICU4   ------>ZmHOX2a(1)         ----------->TBP<------ZmHOX2a(1)    --------->ICU4   <--------P   attatgtgctcttcctgtctaattcccaaaggtttctgctatatatgaagaaacaggaaatgaagataaaaaaggaaagattgagaatgaatggtagggg  24014900           <---------ANAC46           --------->ALFIN1         <---------ANAC58                                        --------->YAB1         <---------ANAC58                                        --------->ATHB12   <---------AtMYB61                                             -------->HAHB4   <---------MYB46(3)     <---------YAB1                        --------->ICU4  <--------P    <---------ARR14(2)                              <---------ATHB12 <-------GAMYB  --------->ARR14(2)                              <---------YAB1 ---------ANAC46<---------PCF2                             <------MYB46(1) ------MYB83    --------->TCP20                            <------MYB83 ------MYB46(1) --------->TCP15(1)              --------->GLK1(2)<---------ICU4 -----MYB46(1)<---------MYB46(3)                <---------ARR14(2) -----MYB83<-----------RAV1(1)                  <---------ARR11(3) --------MYB46(3)     <----------DOF2    <---------LBD16  --------->MYB59                   --------- -----P  <---------ANAC46<---------TOE2(3)      --------->ARR11(3)         ------->TEIL     --------- ----->ALFIN1--------->ALFIN1   ---------->ID1  --------->ARR14(2)    <---------ANAC55(2)   ---------   ttgggttgatggtgtgtgggtccgatttatgtttgtccatttttgtggaatatctgaatgtaggtaatgattacatgaatgtggtctctctctcacacca  24015000                                                                         ------->TEIL                             <---------ANAC58                      <---------YAB1                             <---------ANAC58                    <---------ICU4                          <-----------GT1                        -------->ATHB1                   <----------DOF2                              <---------AHL20(2)                  <---------ANAC58                              --------->ICU4                  <---------ANAC58                              <---------ATHB51 >ANAC46      <---------ANAC46                                  --------->AHL20(2)       <-----------GT1 >ANAC58      <---------ANAC58                  <------ZmHOX2a(1)--------->YAB1     <----------DOF2 >ANAC58      <---------ANAC58        <----------DOF2 --------------->AtSPL8 <-----------GT1        -   tacacactcagacttgtcgtgcttgatttttccttgttttcttttagtgaggactaattgtactaaattattatgcatttagccatctttgataccactt  24015100                                                  --------->ARR14(2)                                           <---------ZAT14                                          <---------ZAT6                                        <---------ANAC58                                        <---------ANAC58                                  <---------ARR14(2)                                  --------->ARR14(2)             <---------YAB1                                  --------->ARR11(3)        --------->ALFIN1                                 <------ZmHOX2a(1)<---------ARR14(2)                            <------ZmHOX2a(1)  <---------ANAC46----------->GT1                  --------->HSFB2a(2)   <---------ANAC46  <---------ANAC46 -------->MYB46(3)<---------HSFB2a(2) <---------YAB1      <---------bZIP60(2)   gaatcaccgaaatttgagttctgaaactgaggagaggattttgagtgttgagtatatgtgatgtgttgttattaactcatagttcaatatttggactaga  24015200                                                     --------->SPL7                                                   <---------SPL7                                                   --------->TOE2(2)                                                   --------->TOE1(2)                                                  <---------ANAC58                          --------->TOE1(3)       <---------ANAC58                          --------->TOE2(3)       --------->ANAC58                         <---------ATHB12         <---------ANAC55(2)                         --------->MYB46(3)       --------->ANAC55(2)                        ------>MYB46(1)           --------->ANAC58                        -------->P               --------->SPL7               <---------ATHB12                  <---------------AtSPL3            <---------WRKY45                     <-------TEIL            <---------WRKY12                     --------------->AtSPL3            <---------WRKY38(1)               ------->GAMYB           <<<<<<<<<<WRKY11                  <---------------AtSPL3           <<<<<<<<<<WRKY6--------->YAB1   --------->MYB52(1)           --------->WRKY18(1)             <-----------GT1          <-----------HVH21             --------->ANAC55(2)   ----------->HVH21    ------>MYB83    <---------ANAC55(2)--------->YAB1   cagttttgacctggtcaaccatttccaaccataaatgtaagtatgtaacggtacgtacgaataagaaaaacttggaattgaattcaaattcaaatttggc  24015300  Previous    Next  AGI:  At5g59540.1    Description:  oxidoreductase, 2OG-Fe(II) oxygenase family protein. similar to 2-oxoglutarate-dependent dioxygenase, putative [Arabidopsis thaliana] (TAIR:AT5G59530.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66433.1); contains InterPro domain ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding; (InterPro:IPR000194); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123) Range:  from: 24013305    to: 24014816    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version