Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                --------->ANAC58                                                                              --------->ANAC58                                                                           <-------TEIL                                                                        <---------At4g35610             --------->MYB52(1)                                         --------->At4g35610          --------->ANAC46                                        <------ZmHOX2a(1)     <---------ARR11(1)                                         --------->ANAC58              <------     <---------ARR11(3)                                         --------->ANAC58            <--------     <-----------ARR10                                    --------------->AGL15            --------->MYB46(3)     --------->ARR14(2)                                   <---------------AGL15        <-------TEIL<-    <---------CCA1(2)                 --------->ZAT6      ----------->RAV1(1) --------->ANAC46-------   aataccatatctaagtaacagaacctatatgttctaagttccactactatctatccaaaaccacataaggaatcagatgcaagccaatatacatccacct  23991500             --------->ATHB12            --------->ICU4                                                                 --------->ZAT2       --------->YAB1                                                                      <---------At4g35610   <---------AHL20(2)                                                                      <---------ZAT2 ---At4g35610-------->HAHB4                                                <---------AHL20(2) -ALFIN1    <---------YAB1                                                --------->AHL20(2)      --- --------RVE1(1)      ----------->GT1                                    <---------AHL20(2)--------->At4g35610 ---->RAV1(2)<---------ICU4   ----------->GT1                  <---------AHL20(2)       ---------->DOF2   gatattttatcaaaatgattccattggtgaaaatgtttattagaaaatatgtgagattggatgatttttttatattttaaattcaattctcaaagctgag  23991600                  --------->YAB1           <----------DOF2     --------->AtLEC2       ----------->GT1      <---------MYB59      <---------ATHB12           <---------ANAC55(2)     --------->At4g35610  --------->ANAC58   --------->CCA1(2)     <---------At4g35610  --------->ANAC58  <---------ARR11(3)     ----------->RAV1(2)  ------>MYB83      --------->ARR11(3)             --------->ANAC58   --------->ARR14(2)     ------>MYB46(1)   <---------ARR14(2)       ----------->RAV1(1)   <---------ARR14(2)     --------->ANAC46----------->ARR10 ---------->DOF2--------->ANAC58 ------->DOF2     <---------ICU4     --------->ALFIN1<-----------------------TaNAC69(2)   taaaggaacctgacttttagtcatgaccaagcaatgcaagtgggaagatattagataagtaaaaaagataacaacacaagaatcaaactccaaaacccta  23991700                                <---------MYB52(2)                    ----------->RAV1(1)                   --------->ANAC46                   ----------->HVH21                                                <---------At4g35610                   <---------ETT(1)                                      <----------DOF2                  ------>ZmHOX2a(2)       <---------AHL20(2) <-----------GT1        --------->At4g35610                 <------ZmHOX2a(2)        --------->AHL20(2) --------->ARR11(3)   <---------RAP2.6(2)                 --------->CCA1(2) -------->P             --------->YAB1 <---------DAG2                --------->ARR14(2)--------->MYB52(1)    --------->AHL20(2)     <---------RAP2.6(2)---                --------->AGP1<-----------GT1   <---------ANAC55(2)   <---------ALFIN1            <--                <---------ARR14(2)<-----------GT1       <---------AHL20(2)   <-----------RAV1(1)  ---              ----------->ARR10 <---------MYB46(2) ------->TEIL      ================================    --------->MYB111(1)      --------->AHL20(2) <---------YAB1       ------>ZmHOX2a(2)            ---   gagaagtagttgcagatagatccgacacaaattaactaacctcttaaattatgtatgttttaataacttgatccactttttgtggctgcttactgttttc  23991800            <---------AHL20(2)   --------->HSFB2a(1)   <---------HSFB2a(1)   <---------HSFC1(2)   --------->HSFC1(2)                         --------->AHL20(2) ---------->DOF2                           --------->TOE2(3) ------>HSFB2a(2)                          --------->TOE1(3) -------HSFB2a(2)                          --------->YAB1                 <----------DOF2 --->ZmHOX2a(1)                 --------->ANAC58               ---------->DOF2 ====HOX2a_HOX2a  <----------DOF2   ---------->DOF2           <---------AHL20(2) ------>LBD16  <-----------GT1  --------->ANAC58            <-----------TBP                   *TSS  -   ctcgaaagttccatttttttcttttgctctgcaaacgaaaaagaaccataaatttttctcatatttaaagctctctctttctctcacaactgtgttcaca  23991900                                                            <---------------AGL15                                                            --------------->AGL15                                                           <-----------------AG                                                   <---------DAG2                                                   <----------DOF2 ----------->GT1                                                <-----------GT1   --------->MYB59                                           <---------ARR11(3)     <---------TOE2(3)        <---------At5g28300                --------->ARR11(3)  <----------DOF2  <----------DOF2       --------->ATHB12--------->DAG2     <-----------------AGL1            <------- ------>TEIL <----------DOF2           ---------->DOF2   <-----------GT1         ---------->DOF2   tgaactttctcaccgctttcttctcttcattgaacaaaaaaaaaagctcttaacttttttttcttctttaggtaaaatttgacaaaagctctcaactttc  23992000                                                                                        ------>ZmHOX2a(2)                                                                                      <---------AGP1                                                                                      <---------ARR11(3)                                                                                      --------->ARR11(3)                                                                                      <---------ARR14(2)                       <---------ICU4                                             ------>ZmHOX2a(2)                       --------->YAB1                                            <------ZmHOX2a(2)                      <---------YAB1                                            --------->GLK1(2)                    <---------ICU4                                              --------->ARR11(3)                    --------->YAB1                                              <---------ARR14(2)                   <---------YAB1                                               --------->ARR14(2)                 --------->YAB1                                                 <---------AGP1                 <---------ICU4            <----------DOF2                      ------->TEIL                <---------YAB1      ------>NtERF2                 ----------->ARR10  <---------CCA1(2)              --------->YAB1       --------->ANAC58   <-------GAMYB  --------->CCA1(2)--------->ARR14(2) ---DOF2      <---------ICU4       --------->ANAC58   <---------At4g35610  --------->MYB52(1)   aaactctgtttcttcatcatcatcatcatcaccatggacgccctgcttcaagtttcagttgatgggtttagatttgagaacggatctggatcttgctgca  23992100                                                                       ------>MYB46(1)                         --------->KAN4(1)                             --------->MYB52(1)                         <---------KAN4(1)                             ------>MYB83                        <---------KAN4(2)                             --------->MYB55(1)                --------->ARR14(2)                                   --------->MYB46(3)                <---------ARR14(2)                                   --------->AtMYB61      ---------                ------->TEIL                  --------->ANAC46       <---------MYB46(2)   <---------ANAC46                --------->GLK1(2)             --------->O2           <---------MYB55(2) ------->GAMYB               <---------CCA1(2)        --------->GLK1(1)           --------->ANAC46 --------->MYB52(1)  --------->LBD16 --------->TOE1(2)     <---------GLK1(1)--------->GLK1(2)    <-----------GT1   aacccagaaacaatctcgaatctgggaacaatctcttccctgatttccacgagtctcagaatcagtcttcaccaaacgattcacctccaacggtgtgttt  23992200                                                                     ----------->HVH21              <                                                                     ----------->TGA1              <-                                                                   <---------ANAC55(2)             <-                                                                   --------->ANAC55(2)             --                                                                   --------->O2                    --                                                                   <---------O2                   ---                                                               <---------ARR11(3)           <--------                                                               --------->ARR11(3)          --------->At4g35610                                                              <---------CCA1(2)            <---------At4g35610                                                          <------MYB46(1)              --------->ANAC58       ----------->RAV1(2)  --------->YAB1                <------MYB83                 --------->ANAC46   --------->ZAT6   <-------TEIL      <---------WOX13(1) <---------TOE1(2)             --------->ANAC58 >ALFIN1 ------>ZmHOX2a(1) <---------ATHB12              <---------TOE2(2)       <----------DOF2  <--   ggataactctcctgttctgaagtacatcaatgatatgttgatggacgaagaagacttcgtaggtatatctcgtgacgatttagctttacaagccgctgag  23992300            <---------ARR11(3)   ------>ZmHOX2a(1)                                                                  --------->GLK1(1) <---------HSFC1(2)                           --------->ZAT14                ----------->HVH21 ------>ZmHOX2a(2)                        --------->YAB1                     --------->WRKY12 --------->HSFC1(2)                <-----------ARR10                        <---------MYB52(1) ------ZmHOX2a(2)                  --------->ARR14(2)                      <---------At4g35610 --------ARR11(3)                  <---------ARR14(2)                      --------->At4g35610      < --------ARR14(2)                 <---------GLK1(2)         ------>ZmHOX2a(1)--------->WRKY38(1)    - ------->ARR14(2)               --------->LBD16--------->ZAT6     --------->YAB1      <---------GLK1(1) ------->ARR11(3)              <---------HSFB2a(2)       ===============HOX2a_HOX2a  <---------ARR11(3) ------>GLK1(1)                --------->HSFB2a(2)       ------>ZmHOX2a(1) --------->LBD16          - --CDC5 --------->ANAC46      <---------LBD16 <---------ZAT14    <------ZmHOX2a(2)   --------->ARR11(3) -------GLK1(1)       ------->GAMYB--------->GLK1(2)    <---------ALFIN1 <---------LBD16          ---   agatccttctacgagataattcaacagcaatctccagaatctgatcagaacactagctcctcctccgatcaaaactccggtgaccaagatttctgttttc  23992400  Previous    Next  AGI:  At5g59450.1    Description:  scarecrow-like transcription factor 11 (SCL11). similar to scarecrow transcription factor family protein [Arabidopsis thaliana] (TAIR:AT3G46600.3); similar to scarecrow transcription factor family protein [Arabidopsis thaliana] (TAIR:AT3G46600.1); similar to scarecrow transcription factor family protein [Arabidopsis thaliana] (TAIR:AT3G46600.2); similar to GRAS4 [Solanum lycopersicum] (GB:ABD72960.1); contains InterPro domain GRAS transcription factor (InterPro:IPR005202) Range:  from: 23991894    to: 23994017    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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