Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          <------ZmHOX2a(2)                                                                        --------->CCA1(2)                                                                       --------->ARR14(2)                                                                       --------->AGP1                                                                       <---------ARR11(3)                                                                       --------->ARR11(3)                                                                       <---------ARR14(2)                                                                       <---------AGP1                                                                     ----------->ARR10                                                                 ----------->GT1                                                               ------->PIF5                           ----------->ARR10                   <-------PIF5                          ==============================================MYC_MYB                          <--------P                           ------->MYC3                        <---------ANAC46                       <-------MYC3                       <---------MYB46(3)                      ------->MYC2                   --------->ATHB12                            <-------MYC2                  <---------YAB1                               ------->MYC4               --------->GLK1(2)                               <-------MYC4              --------->KAN4(2)                               <---------O2              <---------ARR14(2)                              =======================================             <---------KAN4(1)                                --------->bZIP60(2)             --------->KAN4(1)                                --------->O2             <---------HSFB2a(1)         <---------ANAC55(2)  --------->TGA1a                      <-             --------->HSFB2a(1)   <------ZmHOX2a(1)          <---------ANAC46                     <-             <----------TaMYB80 <-----------RAV1(2)      --------->ANAC46------>ZmHOX2a(2)     ------   ----------->HVH21 <---------WOX13(1)  --------->ANAC55(2)  --------->PIF3(3)       --------->ANAC58 --->ICU4   ---------->TaMYB80 <-------TEIL   <---------YAB1  <---------TGA1a         --------->ANAC58 >GT1       <---------KAN4(2)<---------ARR14(2)   <-------TEIL<---------PIF3(3)       --------->ANAC46   ttggtttgacatggaatattctgattgggtagattcaggagtcatgtgatgatacatctatgccacgtggtaagatctgagggattacaagcaatgtaaa  23984400           ----------->RAV1(2)          ------->TEIL         --------->ARR14(2)         --------->ARR11(3)         <---------ARR14(2)                                                          <------NtERF2       ----------->ARR10                                                           --------->ALFIN1    <---------ANAC46               --------->ETT(2)                                <---------ANAC46   <------NtERF2                   <---------ETT(2)                          <------ZmHOX2a(1) --------->ALFIN1                  --------->WRKY38(1)                      <------MYB46(1) --------- <---------DEAR3(1)               --------->ATERF1(1)                       ----------->HVH21 =====bZIP_DOF                    <------NtERF2   --------->LBD16           <------MYB83 ---------->DOF2 --------ANAC58           <---------REM1(1)      <---------DEAR3(1)      <---------MYB52(1)--------->DAG2 --------ANAC58      ---------->DOF2       --------->YAB1  ---------->DOF2<--------P<---------MYB46(3) ---->DOF2--------->GLK1(2)     --------->ALFIN1<---------LBD16----------->GT1    <---------MYB52(1)   agcgtggcgaagaacctggtctaaaaagatgaaggtgtcgaccgataatagccggtgaagagaaagagtataaccggtaggaccggtggggaaaaggtca  23984500                                                                <---------ANAC58                   --------->ANAC58                             <---------ANAC46          <------ZmHOX2a(1)   ----------->GT1 --------->ANAC58   <----------DOF2           <---------ANAC58          =========== -->GT1  ---------->DOF2      --------->ALFIN1             <-----------RAV1(1)  ---------->DOF2   atataggcttaaaaagggtttaagcaaaaaatgtggtcgtctttcttaagggtttttgtttttgtggcgtttcacagagagagaaagaaataggagattg  23984600                                  <--------P                               <---------MYB46(3)            ---------->DOF2                 <------ZmHOX2a(1)                              --------->ALFIN1             <---------AHL20(2)           --------->HSFB2a(2)                            <---------ANAC46               --------->AHL20(2)       <----------DOF2                            --------->ALFIN1               --------->YAB1           <---------DAG2                          <---------ANAC46      --------->ANAC58                <---------MYB52(1)                     ------>ZmHOX2a(2)          ----------->GT1                <-----------TGA1   <---------ANAC46 <------ZmHOX2a(2)<---------ANAC58   --------->YAB1         <-----------HVH21   <---------ANAC58--------->ARR11(3)<---------ANAC46 --------->AHL20(2)      --------->ANAC46   <---------ANAC58<---------ARR11(3)<---------ANAC58--------->YAB1           --------->ANAC55(2) ==========================HOX2a_HOX2a          --------->ANAC58      ---------->DOF2   <---------HSFB2a(2)   tttttgcttgtggtgagagaagatcgcatcgtgtgggtagcgtttcaaacaagtaaaataataaaaagaataaaaagtttccgtcactttctcgaggaag  23984700                                                              <---------ZAT6                                                            <---------ANAC46                                                            <---------ANAC58                                ---------->ID1         <------------CBF                      <----------DOF2              --------->ANAC55(2)            ---------->DOF2                  ------>ZmHOX2a(1)                <---------ANAC55(2)        ----------->GT1                  =====================================HOX2a_HOX2a           --------->DAG2                  <----------DOF2 <----------DOF2------>ZmHOX2a(2)        <------NtERF2         <---------ANAC58   <---------MYB52(1)  <------ZmHOX2a(2)        --------->LBD16        -----         <---------ANAC58 <---------ANAC58     --------->ARR14(2)       --------->LBD16 <-------TEIL         <---------ANAC46 <---------ANAC58     <---------ARR14(2)      <---------LBD16 --------->CCA1(2)      <---------AtMYB61   <---------ANAC46 <-----------GT1  <---------ANAC58---------->DOF2    <-----   aaggggttttggtgtgagtcctttctttgcgtttgtcttttcattttccgatctcgtaattgtcgtgttattcgccggaaaagttaaagattcagattta  23984800                                                                              --------->DOF5.7(2)                                                                              <---------MYB52(1)                                                                          <-----------GT1                                                                       --------->ARR11(3)                                                                       <---------ARR11(3)            <---------At5g28300                                        <---------ARR14(2)         <--       <---------ARR11(3)                                              --------->ARR14(2)      ------       --------->ARR11(3)            <---------YAB1                    <---------GLK1(2)      -------      <---------RVE1(1)              *TSS      <----------DOF2       ----------->ARR10        <------ ----->DOF2<-----------GT1           ------>ZmHOX2a(1)          --------->TOE2(2)             ------- ----AHL20(2)        <---------AHL20(2)<---------GLK1(2)        --------->TOE1(2) --------->TOE2(3)   aaggtgagagattttacagtcattttttttttagtcatcctgattctgtctttgaatttcataaaaccaaggagattttcgttaccttggtctgaaaatc  23984900                                                                                       ------>ZmHOX2a(2)                                                                                      <------ZmHOX2a(2)    ---------->TaMYB80                                                               <---------ARR14(2) -------LBD16                                                                        --------->ARR14(2) --->RVE1(1)                                                                    --------->ARR14(2) -->GLK1(2)       --------->ANAC55(2)          <-----------GT1           ------>ZmHOX2a(2) ---ARR11(3)     <---------TOE2(3)  <-------TEIL            <---------DAG2----------->GT1 -->ARR11(3)    <-----------GT1--------->AHL20(2)           <----------DOF2     <---------ARR14(2)   tctgggtaaatcccaattttacgtttttttaaaaaaaattcgtcgatttttatctttcatcgctttattcttcgatctgtaaaatccgatctgagattta  23985000                              =============HOX2a_HOX2a                         <---------MYB46(3)                        <---------AtMYB61                     <-----------RAV1(1)                    =================HOX2a_HOX2a                    ------>ZmHOX2a(2)                  <---------ARR11(3)                ----------->HVH21          <------ZmHOX2a(2)                    <---------AHL20(2)               <-----------HVH21  <---------ARR11(3)                           <---------AHL20(2)               --------->LBD16====================HOX2a_HOX2a                  --------->AHL20(2)              --------->ANAC55(2) --------->ARR11(3)                       <---------AHL20(2)  <-----              --------->ANAC46------>ZmHOX2a(1)                   --------->AHL20(2)    <---------TOE2(3)          <---------ALFIN1    <----------DOF2         <---------ANAC58  --------->TOE2(3)      <-----   <----------DOF2--------->ARR11(3)------>ZmHOX2a(2) <---------ANAC58<---------AHL20(2)<---------TOE1(3)   gaacccttttgaacacccgtgatctggtggtcctttgatcttgagatcgaagtttttcgtccatacgattattttcttaaatttttttttatggtttagg  23985100                                                    ---------->DOF2                                                 ------>ZmHOX2a(2)                                                <------ZmHOX2a(2)                                                --------->GLK1(1)                                               <---------AGP1              <------MYB46(1)                                               --------->ARR11(3)          <---------MYB46(3)       ----------->GT1                         <---------ARR11(3)          <------MYB83       <---------ANAC46                        <---------ARR14(2)         <---------AtMYB61         -      --------->ALFIN1     <---------MYB46(3)  --------->AGP1  <---------TOE1(3)                    -    ------>ZmHOX2a(1)      <---------DEAR3(2)  --------->ARR14(2)         --------->ALFIN1          - ----TOE1(3)            ------------>AtMYB77  <---------CCA1(2)<---------TOE2(3) <---------TOE1(3)<-- ----TOE2(3)           ----------->HVH21      <---------At4g35610  <----------DOF2  <----------DOF2 -   gttttcctgtggtgaaatatttggaacgacggtttgactctcaatttcagatctcaaagttgtttagggttttagggtggtttaagcttttttcaatggg  23985200           --------->TOE2(3)           --------->TOE1(3)                       --------->LBD16                              ----- -------->WRKY45                                  --------->HSFB2a(2)                    --------->AHL20(2) ---------->HVH21         <----------DOF2         <---------HSFB2a(2)                <---------AHL20(2) -------->WRKY38(1) <---------ICU4          --------->ATHB51                        <---------AHL20(2) --------DOF2      <---------ATHB12         <---------ICU4                <---------MYB52(1)  >>>>>>> -------->WRKY12  <---------ARR11(3)   --------->AtLEC2         <----------DOF2     --------->AHL20(2)   ctttgacccaaaaccttcaaaatcattcctttttttgcttcatgcattatttccagagacaaaacccttttattctgtttttttttttaaatttaaaacc  23985300  Previous    Next  AGI:  At5g59430.1    Description:  ATTRP1 (TELOMERE REPEAT BINDING PROTEIN 1); DNA binding. similar to TRFL1 (TRF-LIKE 1), DNA binding [Arabidopsis thaliana] (TAIR:AT3G46590.1); similar to TRFL1 (TRF-LIKE 1), DNA binding [Arabidopsis thaliana] (TAIR:AT3G46590.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO21633.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 23984837    to: 23988171    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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