Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              <---------ANAC58                                                            <---------ANAC58                                                            <---------ANAC46                                                          <---------YAB1              <---------YAB1   <------MYB83  <---------ARR14(2)  ----------->ARR10           <---------AtMYB61    <----------DOF2                               ---- --------ANAC46             <---------AtLEC2 --------->ARR14(2)                                <----- --------ANAC58        <---------ARR14(2)   <------ZmHOX2a(1)                             <---------- --------ANAC58--------->ATHB12<------MYB46(1)<---------GLK1(1)                      <----------DOF2 ---AtLEC2    <---------AHL20(2)    ---------->DOF2<---------DAG2           ---------->DOF2    ------ --GT1       --------->AHL20(2)----------->GT1--------->GLK1(1) <---------AtLEC2     <---------DAG2   ggcttagactctcatttttattgggaatttggatggtctaaagtcaggatttgctttattttgcttgcaaggttttgtaaaagaacactttttctcggtt  23971800          --------->ANAC46          <---------ANAC55(2)          --------->ANAC58                                     ----------->RAV1(1)          --------->ANAC58                         --------->GLK1(2)          --------->ANAC55(2)                      <---------ARR14(2)          --------->ANAC55(1)                      --------->ARR14(2)       <---------REM1(2)                          <---------GLK1(2)   --------------->AtSPL3                      --------->HSFC1(1) ------------------->TaNAC69(2)                --------->HSFB2a(2) ----ARR14(2)                                  <---------HSFB2a(2) -GT1--------->LBD16                           <---------HSFC1(1)                                  <- --->ARR14(2)                         <-----------GT1 ----------->GT1---------->DOF2       <---------LBD16   cttcatccgtacacgtaacaaatccatttcttatgtgttttttcgatttctagaatctgtaaaacccacaaaaaagaggtttttttttttgtttctgggt  23971900                             <-----------GT1                        --------->ARR11(3)                        <---------ARR11(3)                          <---------YAB1                    --------->CCA1(2)                --------->GLK1(1)                             --        --------->At4g35610<----------DOF2           <---------GLK1(1)      --------->GLK1(1)    ---- ---------DOF2   ----------->ARR10       --------->YAB1   <----------DOF2   <---------GLK1(1)   <----   tctttgaagaagcagagagaagataagctctttacagttttcttcataacaagtgatttccttttgttttcttattcgatttccagtttctatatgttac  23972000                                                                                         <----------DOF2                                                                                        ------>ZmHOX2a(2)            <-----------GT1                            <----------DOF2                  ============= ------->AHL20(2)          <-------TEIL         <---------TOE2(3)                     --------->ARR11(3) ----->TOE2(3)--------->ZAT6             --------->TOE2(3)                            <---------ARR11(3) -----ANAC55(2)       --------->YAB1     --------->TOE1(3)               <---------MYB46(3)      ----   ataaatttgatttttaactctgaatcatatacattactcaaaaccttaaaaaggtttcttttttgtttgtctaggttgttcaaaacttgatctttcagta  23972100              ------>ZmHOX2a(1)            ------>ZmHOX2a(2)           <------ZmHOX2a(2)          --------->ARR14(2)          ------->TEIL                            <----------DOF2          <---------ARR14(2)                    --------->At4g35610     --------->CCA1(2)                    <------------CBF    --------->ARR11(3)                  <---------AHL20(2)                               --------->At4g35610    --------->AHL20(1)                <----------DOF2                                    <---------At4g35610   --------->AHL20(2)          ---------->DOF2  <---------At4g35610                      <---------ZAT2 ====================HOX2a_HOX2a   <---------ARR11(3)       ----------->GT1     <------ZmHOX2a(1) ----->At4g35610   --------->YAB1  --------->ARR11(3)     ----------->GT1---------->DOF2 --------->ZAT2   gctaaatatatggatcctctataatctcatttgtaaagctcttttattgcagctttaagatggagaaaaatcaacaaaagcaggaatttctagctgagac  23972200                                                                         <------MYB83             ---                                   --------------->AtSPL3                <------MYB46(1)          <--                                   --------------->AtSPL8               <---------MYB46(3)        <--                                --------->ZAT14                         <---------AtMYB61     ------>MYB83                                <---------ZAT14            <---------ANAC58                   ------>MYB46(1)                            ------>NtERF2                  <-----------RAV1(1)               --------                         ------->GAMYB                     <---------ANAC58  <---------HSFB2a(2)-----                      --------->MYB52(1)             --------->ATHB12  <--------P    ----------->RAV1(1)   ctcagagatgaagaacaccaaaaacaacgacgactgttctgtacaacaacaacaacgatttgtgtggccatgggttggtctagtagccaacataccaacg  23972300                                                       <---------ZAT14                                                       --------->ZAT18                                             <---------bZIP60(1)                                             <---------ANAC55(1)                                             <---------ANAC58        --------->MYB52(1)                   <---------O2      <---------HSFC1(2)                     --------->bZIP60(1)      --------->HSFC1(2)                     <---------ANAC55(2)      --------->MYB46(3)                     <---------ANAC58      <---------HSFB2a(1)    --------->DAG2  --------->ANAC55(2)      --------->HSFB2a(1)   ---------->DOF2  <---------ANAC46 --------->ALFIN1       --------->ANAC58  <---------MYB52(1) ------>ALFIN1          --------->ANAC58 <-----------HVH21         ----------->GT1       ------>MYB46(1) -------AtMYB61--------->ETT(1)         --------->ANAC46       ---------->DOF2           ------>MYB83 -------DEAR3(1) <------NtERF2         <---------TOE2(3)     <---------YAB1              -------->P ->MYB52(1)    <---------DEAR3(1)    <---------WRKY12  --------->ZAT14                   --------->ANAC46 -->GAMYB    <-----------HVH21   <---------MYB46(3)    <---------ZAT18       ----------->RAV1(1)   gaggtggaaccatcgggtcggagagtaggcaaaagcggttcaacgttacgtgatgagttcactatgaaagggtttaatccaacaagagtccaacccattt  23972400                                  --------->ARR14(2)                            <---------MYB46(3)                           <---------AtMYB61           <---------ARR14(2)                         <----------DOF2               --------->ARR14(2)                           <                        <---------ANAC58              <------ZmHOX2a(1)                            <-            --------->KAN4(2)<-------GAMYB     <----------DOF2          ------->TEIL    <---------AHL20(2) --------->GLK1(1)      <---------ANAC58 ---------->DOF2    ---------->DOF2   ---------->DOF2      <-   gggatttcaagggtcattctggttttgctttggttgaattcgctaaagactttgaaggattcgaaagcgccatgaatttcgaaaggagttttaatttaga  23972500                                                                                               ------                         ----------->GT1                                  --------->YAB1 <----------DOF2                        --------->DAG2                           <---------ANAC58    <----------DOF2                       --------->DAG2                         <----------DOF2    <---------ZAT18 ---------MYB52(1)    ---------->DOF2                        <---------ANAC58    --------->ZAT18 --------RAP2.6(3)<----------ID1                             <---------ANAC58    <---------ZAT14 ----------HVH21 ----------->GT1                  ---------->DOF2<---------ANAC58--------->ZAT14   <-   ccgtcatgggaagagagattgggaaaaaggtaaaacattgtttcagagtttttaaagtcatttgctttcttgacattgatgagttcactttctttgtaaa  23972600      <---------ANAC58                                <---------YAB1      <---------ANAC58                          <---------YAB1 <---------WRKY12                               --------->ICU4                   --------->ANAC58 <---------WRKY38(1)               <--------P <------ZmHOX2a(1)                  --------->ANAC58 ---->DOF2                        <---------ANAC58  --------->YAB1     <---------MYB52(1) ----------HVH21                  <---------ANAC58 <---------YAB1    <-----------RAV1(1)           --   aggtcatcgcttgagagacaataagctctatggatgggttgccagagaggatgattataatcgaagtgatactgttgggaagaacgtcaagaagaagaga  23972700  Previous    Next  AGI:  At5g59390.1    Description:  XH/XS domain-containing protein. similar to XH/XS domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G01180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69191.1); contains InterPro domain Region of unknown function XH (InterPro:IPR005379); contains InterPro domain Region of unknown function XS (InterPro:IPR005380) Range:  from: 23972160    to: 23974377    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version