Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      --------->AHL20(2)               ------>ZmHOX2a(1)           <---------ARR11(1)           --------->ARR14(2)          <---------CCA1(2)          <---------ARR14(1)        <---------ANAC58            --------->AHL20(2)        <---------ANAC46            --------->YAB1        <---------ANAC58      --------->STY1(2)                             <---------TOE2(2)  <---------------AtSPL3   <---------ANAC58                              --------->YAB1     ---------  <---------------AtSPL8   <---------ANAC58  ---------->DOF2 <---------MYB52(1)   --------->YAB1  <---------ICU4    <---------AHL20(2)    ----------->GT1--------->ARR11(3) <---------TOE1(2) -->TOE2(3)<---------ARR14(2) <---------STY1(2)   ----------->GT1      <---------ARR11(3) <----------   aaaataagtaccgtatcctaatataaattgctagctaataaaaattgtaaagaggttaatatcgttgtctcaaaatcatatgtttcataaatataccaca  23966600                                       --------->YAB1                           ----------->RAV1(1)                                       <---------AHL20(2)                      --------->REM1(1)>>>>>    <-----------ARR10                  --------->AHL20(2)               <------------MYB.PH3(2)<-----    --------->ARR14(2)        <---------YAB1               ----------------->AGL1             <------ >ANAC46                   --------->ICU4          --------->At4g35610  <---------MYB52(2)--------->ARR14(2) -GT1             ---------->DOF2 <-------TEIL  <---------MYB52(1)      --------->MYB46(3)<---------ARR14(2)   tatacaaatctacacatataaaaagggtcattttgatacatttatattccattatctgaagtccaattgcagtaacaaactacaacaaatcggattttaa  23966700                                                        <---------AHL20(1)                                                        --------->AHL20(1)                                                        --------->ARR11(3)                                                    <---------AHL20(2)                                                   <---------AHL20(2)                                                   --------->AHL20(2)                                   --------->AHL20(2)   <---------ARR11(3)                                   <---------AHL20(2)  --------->AHL20(2)                              --------->ICU4      <---------YAB1                          <---------WOX13(1)    <--------HAHB4                          <--------P            --------->YAB1                         <-------GAMYB          <---------ICU4                        <---------MYB46(3)      -------->ATHB1               --------->WOX13(1)                        ----------->GT1         --------->AHL20(2)         <---------ATHB12        <-                    ------->TEIL  --------->YAB1--------->ATHB51      <----------DOF2             <--      <------ZmHOX2a(1)--------->ALFIN1        <---------YAB1        ------>ZmHOX2a(2)       <------- >>>>MYB98       <---------ATHB12<---------YAB1--------->ICU4        =======================HOX2a_HOX2a ------GT1       <---------YAB1<---------ICU4  <---------ATHB51    <---------ARR11(3)       --------- -----GT1 ----------->HVH21   <---------YAB1--------->ICU4         --------->ARR11(3)<------ZmHOX2a(1)   catactaaggactcgacccatgaatgtggttgattattaaaatgtcacaattattaaatatatcatcttgatctttaatcaatctcaggactcaatgacc  23966800                                  <-----------GT1                             <---------AHL20(2)                             --------->AHL20(2) --------RVE1(1)         --------->ICU4                                                 --------->TOE1(3) -------MYB52(1)         <---------YAB1      --------->AHL20(2)              --------->RAP2.6(3) --WRKY18(1)            <---------TOE2(3) --------->AHL20(2)      --------->LBD16       --------->TOE2(3) -->HVH21              --------->MYB52(1)--------->AHL20(2)     <---------LBD16   --------->AtMYB61   gatatttcaaaatcccaatattgaataacgattaattaacaaaataaaaaaatcaataacgcttcatccggagaaccatgacgaccaaaaccttaatttt  23966900                      --------------->AGL15                     ----------------->AGL3                   --------->ARR14(2)                   ------->TEIL                   <---------ARR14(2)                  <---------CCA1(2)                                                          <-------                --------->ANAC46            <-----------TGA1                              ------>ZmHOX2a(2)                --------->ANAC58            <-----------HVH21                            <------ZmHOX2a(2)                --------->ANAC55(2)        --------->bZIP60(1)   *TSS                   --------->ARR14(2)                --------->ANAC55(1)        <---------bZIP60(1) ==================================HOX2a_HOX2a                --------->ANAC58           --------->TGA2(1)   =================================HOX2a_HOX2a                <---------ANAC55(2)        <---------TGA2(1)   <------ZmHOX2a(1)        <---------ARR14(2)            <-----------HVH21          ------->MYC3       --------->CCA1(2)             <---------ARR11(3)           <----------DOF2             <-------MYC3      --------->ARR11(3)   --------->MYB52(1)    -   tgggcatgttgaactttcacgtatccaaaaataggtgaacacatgtcgtcaccctcttagatataggatttagcaaaaactaatggccacgatctgttaa  23967000                                                                         <---------ARR11(3)                                                                         <---------ARR14(2)                                                                         --------->ARR14(2)                                                                        <------ZmHOX2a(1)                                                                      <---------TOE1(2)                ---------->DOF2                                  <-------GAMYB             --------->ANAC58                                   <---------DEAR3(1)             --------->ANAC58                                   --------->ALFIN1            --------->DAG2                                      <---------ANAC58      ----------->GT1                                           <---------ANAC58   --------->ANAC58          <---------MYB52(1)                ------>NtERF2       ---------->ID1   --------->ANAC58        <---------ANAC58                  <------NtERF2 ------>ZmHOX2a(2) --MYB52(1)---------->DOF2 <---------ANAC58               --------->ALFIN1<------ZmHOX2a(2)         - -------->WRKY18(1)     <----------DOF2        ------->TEIL<---------DEAR3(1)  --------->GLK1(1) ----   gagtcaagcgataaaaagcaaagctcctttcgttttttcagaaattttgaacccattcaagtcggggcgttgcaggatccgatttctcgttttgttcttc  23967100                                                                           --------->ANAC58                                                               ----------->GT1                       <---------ARR14(2)                   <---------ANAC58           ----------->GT1         <---------ANAC58         <---------ANAC46         --------->ARR11(3)         <-----------RAV1(2)       <---------ANAC46         <---------ANAC58         <---------ARR11(3)      <-----------GT1  --------->ARR14(2)                   <---------AtLEC2  >>>>>>>>>>GT-3b -------->AHL20(2)    ------>MYB83 <---------ANAC58     <---------ANAC58   --------->ANAC58 ----->TOE2(3)        ------>MYB46(1)                   <---------ANAC58   ----------->GT1   gttaaaattcaccaggtgataaccaaatacccttgtttcttggtaacaatttcgattttcttgcatggaaaaatgtcaagaaaaatagattttagataaa  23967200                                   <---------ANAC58                 --------->TOE2(3)                                   <---------ANAC46             <---------MYB52(1)            <------                           <---------AHL20(2)                 ----------->GT1              --------->MYB52(2)                           --------->AHL20(2)--------->YAB1<---------ARR14(2)              <---------MYB46(3)                      <---------YAB1 <---------MYB46(3)    ------------>MYB.PH3(1) <---------YAB1         <---------ANAC55(2)       <---------ANAC58        --------->ARR14(2)    <-----------GT1   tcaacttgaatatgtaaggccattttcatttaaaatggcttgttgaatgaaaatttcatgggaaccgttacattatttgcatattacaattgtttgttac  23967300                                               --------->ARR11(3)                                               <---------ARR11(3)                                         --------->At5g28300                                        ----------->GT1                                       <---------DEAR3(1)                                      --------->SPL7                                      <---------ORA47(1)                                     <------NtERF2                                     ------>NtERF2                                    <---------SPL7                                    ----------->HVH21             ----------->HVH21                                   <---------ANAC58        <----------DOF2        --------->YAB1             <---------RAP2.6(2)    <---------MYB52(1)                  -------       <-------TEIL                <---------ANAC46     ------->GAMYB                        --------   <---------YAB1                  <---------ANAC58    --------->MYB46(3)                <---------TOE2(3) -----GT1    <-------TEIL         <---------LBD16    <-----------GT1                     <---------TOE1(3)   cggtcttgattcatattcatatatagattgaagaatggcggacggtgaagacattcaaccgcttgtttgtgacaatggaactggaatggttaaggtaaag  23967400                                                                                       --------->ARR14(2)                                                                                       <---------GLK1(2)                                                                                    --------->RAP2.6(2)                                                                             <---------ANAC58                                                                             <---------ANAC58                                                                          --------->LBD16       -----                                                                         <---------ANAC55(2)    -----                                                                         <---------ANAC58    --------                                                                         --------->ANAC55(2) <-------                                                                         <---------ANAC46   <--------                                                                         <---------ANAC58  <---------LBD16                                                                   --------->ARR11(3)  <---------ARR14(2)                                     <---------TOE2(3)             <---------ARR11(3)--------->LBD16 -->DAG2               <-----------HVH21                           --------->AHL20(1)<------NtERF2 -->DOF2     <---------YAB1    --------->AHL20(2)               --------->AHL20(2) <---------LBD16 <-   tttctctctaagactcttattgctatgtcacatatatataaggctatgccataaacgactactcaaaaatatatcccgtgcttaggccggattcgcgggt  23967500  Previous    Next  AGI:  At5g59370.1    Description:  ACT4 (ACTIN 4). Identical to Actin-4 (ACT4) [Arabidopsis Thaliana] (GB:P53494); similar to ACT3 (ACTIN 3), structural constituent of cytoskeleton [Arabidopsis thaliana] (TAIR:AT3G53750.1); similar to ACT12 (ACTIN-12), structural constituent of cytoskeleton [Arabidopsis thaliana] (TAIR:AT3G46520.1); similar to ACT1 (ACTIN 1), structural constituent of cytoskeleton [Arabidopsis thaliana] (TAIR:AT2G37620.2); similar to Actin (GB:Q05214); similar to hypothetical protein [Vitis vinifera] (GB:CAN83697.1); similar to Actin-58 (GB:P30167); contains InterPro domain Actin/actin-like; (InterPro:IPR004000); contains InterPro domain Actin, conserved site; Range:  from: 23966965    to: 23969063    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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