Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         <-----------GT1                                                                                    <---------ICU4 --------->ARR11(3)                                                                --------->AHL20(2) <---------ARR11(3)                           <---------AHL20(2)                   <---------AHL20(2) ---------CCA1(2)         <----------DOF2    --------->AHL20(2)                    --------->AHL20(1) ---------GLK1(1) --------->ZAT6          <------ZmHOX2a(1)                       --------->AHL20(2) ------YAB1 --------->ARR11(3)           <XXXXXXXXXXXXXXXXXXXXMIR426   <---------AHL20(2) --->YAB1   <---------ARR11(3)        ---------->DOF2                  --------->AHL20(2)   tgatatctttgtaatatctaatactactctttctgtgtctaaaaggattaattttcaaaaatttcacacatattaaaaaaaaaaaaaaattactagctaa  23945800                                            <---------AHL20(2)                                           <---------AHL20(2)                                     --------->AHL20(2)                                     <---------AHL20(2)                                  <---------AHL20(1)                                  <---------ICU4                                  --------->AHL20(2)                                      --------->YAB1                                  --------->YAB1                                         <---------YAB1            --------->YAB1        <---------AHL20(2)                                    --------->AHL20(2)           <---------YAB1         <--------ATHB1                                        <---------AHL20(2)         <---------ICU4----------->GT1<---------AHL20(2)                               --------->YAB1         --------->YAB1--------->YAB1<---------AHL20(1)              <-----------GT1  <---------YAB1        <---------ATHB12         --------->ICU4              ------>ZmHOX2a(1)      <---------ZAT6   acaattttcaataatcataaaacaatagtaacttaataatttttttttattttcaaaatagtccttcaagtttacaattcattttagtattataatcaac  23945900                                                       <---------ICU4                                                      <---------ATHB12                                                --------->HSFB2a(2)                        --------->AHL20(2)      <---------HSFB2a(2)                        <---------AHL20(2)   --------->ARR11(3)                       --------->AHL20(2)    --------->GLK1(2)                 ----------->GT1             <---------ARR11(3)                                    --            --------->DAG2       --------->HSFB2a(2)  --------->ICU4                          -------           ---------->DOF2   <----------DOF2--------->RVE1(1)                                --------         <---------AHL20(2) <---------ICU4--------->AHL20(2)                             --------->AHL20(2)   aaaatttgtattaaaaagttggaaaattaatctttgtggaacaaaaaaatctagaaatcattttttagaattagagagaggtttgataaaaaaaaataaa  23946000                                                                  --------->ZAT14                                                                  <---------ZAT14                                                     --------->YAB1                                                     --------->TOE2(3)                                                   --------->GLK1(2) ------->AHL20(2)                                  <---------ARR11(3) -->AHL20(2)                                       --------->ARR11(3) ->AHL20(2)  <---------------AtSPL8     <---------YAB1       --------------->AGL15   aaaaaatagagagaggtagtacatactaaacgatgtgatactactattgacaaaatcttaattctcagtttagtagaataaactagaaggaatgaatgaa  23946100                                                                                                 *TSS                                                                                       <----------DOF2                                                                                       <---------DAG2                    --------->MYB46(3)                                         <---------At4g35610                    <---------MYB52(2)                                       <---------ICU4     <----             --------->MYB46(3)                                           --------->YAB1        -----             <---------MYB111(1)             <-----------GT1       <-----------GT1  <---------ALFIN1       --------->GLK1(2)              --------->YAB1           ----------->TBP --------->At4g35610       --------->ARR14(2)            <---------YAB1    --------->GLK1(1)  <---------ICU4       <-----       <---------ARR14(2)          --------->YAB1      <---------GLK1(1) <---------ATHB12  <---------   gtaaatgcgaatccaactactaacaaaccctacttagtcatcatattttcccatatgaaatccctatataaacccatcatcatctcccacttttttcata  23946200                                                                                            <-------TEIL                                                                                           <---------ARR14(2)                                                                                           --------->ARR14(2)                                                                                           <---------   ----------->RAV1(1)    --------->ANAC46                                              <---------TOE1(3)   xxxxxxxxxxxxxxxxx>smallRNA(si3)                                                      <---------TOE2(3)  --------->MYB46(3)      --------->ANAC58                                    <----------DOF2 -----ARR14(2)            --------->ANAC58                                   <---------ANAC58 ---->ARR14(2)  --------->At4g35610                     ---------->DOF2      <---------ANAC58      -- ----CCA1(2)   --------->ANAC58                    --------->ANAC58    xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) --GT1         --------->ANAC58                    --------->ANAC58  --------->YAB1 <----------DOF2<-   tccaacaacaaaaacataagctaagaaaacgaaactcaactaattttgttatcacccaaaaagaagttcaaacacaatggctttcgctttgaggttcttc  23946300                                                                       <---------ANAC58                                                                       <---------ANAC46                                                                       <---------ANAC58                                                                    <--------P                                                                   <---------MYB52(1)                <---------ANAC46                   <-----------RAV1(1)<---------ZAT2                --------->ALFIN1                   ==========================MYC_MYB    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)          <---------O2  --------->MYB111(1)   <---------ANAC58                                --------->O2 <---------ANAC46           ------>MYB83   <---------ANAC46                                <---------TGA1a<------MYB83    ------->MYC3   <---------ANAC58                                --------->TGA1a<------MYB46(1) <-------MYC3     -- --ARR10    <---------At5g28300                    =========================RAV   ------->MYC2   ---- ----->MYC3<-----------GT1             --------->At4g35610      <-----------RAV1(2)        ------>MYB46(1) ------MYC3--------->MYB52(1)       xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       <-------MYC2-------   acatgccttgttttaacggtgtgcatagttgcatcagtcgatgctgcaatctcatgtggcacagtggcaggtagcttggctccatgtgcaacctatctat  23946400                ------>NtERF2          <---------DEAR3(2)          <------MYB83          <------MYB46(1)          <---------MYB46(3)         <---------DEAR3(1)         --------->MYB46(2)         <---------AtMYB61         --------->ALFIN1         --------->MYB111(2)         <---------MYB46(3)         --------->MYB111(1)         --------->MYB55(2)        <--------P        <---------MYB55(1)       <---------ANAC58       <---------ANAC46       <---------ANAC58       <-------GAMYB      <------MYB83      <---------MYB46(3)                                                                  --------->At4g35610      <------MYB46(1)                                                         ------>NtERF2  xxxxxxxx      <---------DEAR3(2)                                                     --------->DEAR3(1)------     <---------MYB46(3)<-----------RAV1(1)                                --------->RAP2.6(2)<-------TEIL    --------->ALFIN1   ===================RAV                     --------->ANAC58        <---------At4g35610 --------->DAG2<---------ALFIN1                                   --------->ANAC46  <---------ANAC58 -------->DOF2--------->ATERF1(1)<------ZmHOX2a(1)                --------->ANAC58  <---------ANAC58 ----->YAB1   <------NtERF2   <-----------RAV1(2)      ----------->GT1  xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) -->WOX13(1) ------>NtERF2<---------ANAC46       --------->ZAT6 --------->AtMYB61  --------->ZAT2   caaaaggtgggttggtgccaccttcatgttgtgcaggagtcaaaactttgaacagtatggctaaaaccacaccagaccgccaacaagcttgcagatgcat  23946500                                                               <---------DEAR3(1)                                                              --------->ZAT14                                                              <---------ZAT14                                                             --------->ALFIN1                                                         ---------->DOF2                                                      ------>ZmHOX2a(1)                                                      --------->LBD16  <---------ZAT14                                     --------->HSFB2a(2)  --------->ZAT14                                     <---------HSFB2a(2)  <---------ZAT18 <---------ARR14(2)                 <---------LBD16            <---------ARR14(2)  --------->ZAT18 --------->ARR14(2)            <---------ANAC58  --------->ALFIN1             ------ xxxxxxxxxxx>smallRNA(fl3)     ------->GAMYB    <---------ANAC58<---------ANAC46--------->ARR14(2) ->TEIL          <---------GLK1(1)         ----------->RAV1(2)--------->ZAT18  <---------CCA1(2)    -   ccagtccactgcgaagagcatttctggtctcaacccaagtctagcctctggccttcctggaaagtgcggtgttagcattccatatccaatctccatgagc  23946600                                     <---------ARR11(3)                                     --------->ARR11(3)                                  <---------------AGL15            --------->YAB1               --------->ICU4    --------->ANAC55(2)      <---------AHL20(2)          --------->ANAC58       <---------ANAC58     --------->ATHB51      ----------->RAV1(1)        <---------ANAC58     <---------AHL20(2)                         <--- --->ZAT18--------->ANAC58     <-----------GT1        --------->AHL20(2)                         <--- -------->MYB52(1)  <---------AHL20(2) ------>ZmHOX2a(2)<---------YAB1                  ------>ZmHOX2a(2)   actaactgcaacaagtaagtatttagttttgttttacttgatctagagaccatgaattattttttctaatgacaaaatgtgttctcttgatcgtttggat  23946700  Previous    Next  AGI:  At5g59320.1    Description:  LTP3 (LIPID TRANSFER PROTEIN 3); lipid binding. Identical to Non-specific lipid-transfer protein 3 precursor (LTP3) [Arabidopsis Thaliana] (GB:Q9LLR7;GB:Q9FIE6); similar to LTP4 (LIPID TRANSFER PROTEIN 4), lipid binding [Arabidopsis thaliana] (TAIR:AT5G59310.1); similar to lipid transfer protein 4-like protein [Thellungiella halophila] (GB:AAM19702.1); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); contains InterPro domain Plant lipid transfer protein/Par allergen; (InterPro:IPR000528); contains InterPro domain Bifunctional inhibitor/plant lipid transfer protein/seed s Range:  from: 23946197    to: 23946971    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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