Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          ------>ZmHOX2a(2)               --------->ICU4               <---------ATHB51          --------->ANAC46          --------->ANAC58                              <---------ANAC55(2)      --------->WOX13(1)          --------->ANAC58                            --------->AHL20(2)       <---------ATHB12        --------->AtMYB61                          <---------ICU4      --------->ARR14(2) --------->ANAC46     <---------ARR11(3)  --------->ANAC55(2)          <---------ARR14(2) --------->ANAC58     --------->ARR11(3)  --------->ANAC58             ------->TEIL<---------ATHB12 --------->ANAC58 <---------ANAC55(2)     --------->ANAC46             --------->GLK1(2) -------ARR14(2)  --------->ANAC55(2)     <---------ANAC55(2)     --------->MYB52(1)  ----------->GT1 ------>ARR14(2)--------->YAB1            --------->ANAC58     ------->TEIL--------->LBD16   aatacgaaaaccacacaattatgtgatctacaatgttcaatctcaagtaacaacaattacatatgaatcaacgaatccgaaatcaatgaagaaaaaaaaa  23938100                           ----------->GT1                 --------->ANAC58                          --------->YAB1                   --------->ANAC58                        --------->GLK1(2)                  ----------->GT1                       --------->YAB1            <---------ARR11(3)                 --------->GLK1(2)               --------->GLK1(2)              --------->ANAC58                   --------->ARR11(3)              --------->ANAC58            --------->At4g35610    ---------->DOF2          --------->HSFB2a(2)        --------->DAG2      ---------->DOF2                          <--          <---------HSFB2a(2)       ---------->DOF2  ---------->DOF2                           <-----   aaaaaaactgttccacaagaatcaagaatcagaaaaaaaaaagtagctaaaaatctaaagaaagcaaaaaaggaagagagttgtttactagagagtatca  23938200                                                                                        ------>ZmHOX2a(2)                                                                                       --------->At4g35610                                                                                       --------->CCA1(2)                                                                                       <------ZmHOX2a(2)           --------->YAB1                                                             --------->ARR11(3)        --------->YAB1                                                                <---------ARR11(3)       <---------ATHB51                                                               <---------AGP1    --------------->AGL15                                                             --------->ARR14(2)    <---------------AGL15                                    --------->ARR14(2)       --------->AGP1   ----------------->AGL1                                    --------->GLK1(2)        <---------ARR14(2)   <-----------------AGL3     <---------ARR11(3)             <---------ARR14(2)      <---------GLK1(1)   <-----------------AGL1     <---------AHL20(1)      <---------At4g35610    <---------ANAC58   ----------------->AGL2     --------->AHL20(2)      --------->At4g35610    <---------ANAC58   <-----------------AGL2     <---------AHL20(2)      --------->ZAT2     <------ZmHOX2a(1) <---------SPL7               --------->AHL20(1)      <---------ZAT2     ======================HOX2a_HOX2a ----ZmHOX2a(1)  ------->GAMYB--------->ARR11(3)     ----------->RAV1(1) =====================HOX2a_HOX2a ------RAV1(2)<---------DOF5.7(2)             --------->ANAC46  --------->WOX13(1)   --------->GLK1(1)   ggaggtccgataatggtaacgctccattcgaatatattcttctcatcaacgagaccagcagagaatccatcaacaggatgcttacagagatctgaatcaa  23938300                                                                          <----------DOF2                                     <---------WOX13(1)             <---------ANAC58        --------->ARR14(2)    --------->YAB1--------->MYB59--------->GLK1(2)        <---------ARR14(2) --------->WOX13(1)      <------ZmHOX2a(1)<---------ANAC58        <------ZmHOX2a(1)   acaaaaatcggatttagagaagaacataacaatcacaagattgattttggtaaggagagagattccaagggcttgcctttgagttgtttctgaaggagaa  23938400          --------->ANAC58          --------->ANAC58       <---------ANAC58                                       <---------AHL20(2)       <---------ANAC58                                       --------->AHL20(2)   <---------ANAC58                                        <---------AHL20(2)                   <----   <---------ANAC58      <---------YAB1                  <---------CCA1(1)                      -----  <---------STY1(2)    --------->YAB1                    <---------RVE1(1)                     <-----  <---------ZAT2      --------->ICU4                    --------->ARR11(3)           ----------->GT1  --------->ZAT2      <---------YAB1                    <---------ARR11(3)     <---------YAB1  <-----  --------->STY1(2) --------->YAB1--------->GLK1(1)   <---------TOE2(3)     --------->GLK1(2) <------   ggctagcttgcgaagccatggatgatgatgatagagaaatcgagagaattgaaattgagatttttttaatatgacaaggttctgattttgtgaattttcg  23938500                                               <---------LBD16                                          ------>ZmHOX2a(2)                                         <---------At4g35610                                         <------ZmHOX2a(2)                                         --------->GLK1(1)                                        <---------ARR11(3)                                        --------->ARR14(2)                                        <---------ARR14(2)              <---------ICU4      --------->At4g35610                   <---------YAB1 -----HSFB2a(2)  --------->YAB1   --------->ZAT2                      <-----------GT1 ---->HSFB2a(2) <---------YAB1    <---------ZAT2<---------ANAC46    <---------DAG2 ----ANAC46  --------->ICU4  ---------->DOF2--------->At4g35610     <----------DOF2 ----LBD16 --------->YAB1------->MYC3   --------->ARR11(3)       <-----------GT1 --------->MYB46(3)<- ---LBD16 <---------YAB1 <-------MYC3 ----------->ARR10       <-----------GT1    ------------>CBF  <-   ggaatcgatgttttcattatgagaacacatggaaagagctgggatctgctacgggcatacctattttctactttactattctaaccaatagggttttgtg  23938600                         <---------HSFB2a(1)                         --------->HSFB2a(1)                         --------->HSFC1(2)                               --------->ARR11(3)                     --------->HSFB2a(2)                                  <---------ARR11(3)             --------->DOF5.7(2)                                          <---------GLK1(2)            <-------GAMYB<---------HSFC1(2)                          <-----------GT1       <----------DOF2--------->LBD16                          <------MYB46(1)     <-------TEIL       <---------DAG2<---------HSFB2a(2)        <-----------GT1<------MYB83  <-----------GT1 ---------DOF2 <---------DOF5.7(2)    <------------CBF    --------->ATHB12<---------ARR14(2) --------DAG2<---------MYB52(1)     <---------YAB1       <---------YAB1   --------->ARR14(2)   acttttccactttccgttaacttccgaaaattctaacaacgattgtagtttaaccggttttgatttggtttttacagattttcggttcagtttcggttta  23938700                                  --------->CCA1(2)                                  --------->GLK1(1)                           --------->AtLEC2                                 --------->ARR11(3)            <---------HSFB2a(1)                                 <---------ARR11(3)            ----------->GT1--------->ANAC58                             ---------->DOF2                   <---------HSFC1(2) --------->ANAC58                           <---------ATHB12                    --------->HSFC1(2) --------->ANAC58                 --------------->AtSPL8                       <---------------AtSPL8                 <---------------AtSPL8             --------->ANAC55(2)       --------->ANAC46        --------->ANAC58 ------>MYB83--------->YAB1 <---------ANAC55(2)      <-------MYC3        --------->ANAC58 ------>MYB46(1)         <---------MYB52(1)          ------->MYC3  --------->YAB1  <------------CBF     <---------MYB59       <---------At5g28300  <-------TEIL--------->ANAC58-------   gtcagattgcaagaaaaaacaggtaccaaatcaaagatatcaaaattcactgttatgtgactagaaggttcatatatcacatgcaagacaaaatcaaaat  23938800                                     <---------YAB1                                   --------->YAB1                     <-----------RAV1(1)                                  <---------ATHB12                  <------MYB46(1)                         --------->YAB1                             <------MYB83                        --------->ICU4     <---------At4g35610     <---------AtMYB61            <---------AHL20(2)    <---------ATHB51     <-----------GT1<---------REM1(1) --->DOF2 <---------AHL20(2)    --------->WOX13(1)  <---------AHL20(2)--------->ALFIN1    <---------MYB59   gcgcatacttatattttttttttgaaatgataaccaattatgttgagcacctatttttttctatttgtgtaggtgttgccaaatagtttggacctatttg  23938900                                 <---------ANAC55(2)                                 --------->ANAC55(2)                          --------->ARR14(2)                               --------->GLK1(1)                              --------->TCP16(1)                               <---------GLK1(1)                              --------->TCP20                              <---------ARR14(2)       <----------DOF2        <---------ARR14(2)                              --------->ARR14(2)       <---------DAG2     <---------LBD16       >>>>>>>>>>>>>>>>>LFY  <------ZmHOX2a(1)  <---------YAB1           <---------ANAC58   <---------REM1(1)<---------ETT(2)          <---------AHL20(2)         <---------ANAC58      <-----   --------->ALFIN1 ----------->GT1----------->HVH21<-----------GT1      <---------ANAC46    <-------   <-----------RAV1(1)   ---------->DOF2     <---------AHL20(2)    <-------TEIL              <-------   tctaggtgttgccaatgttatgtcgataaaaggatacctgatggttttttatttttacttttcaaaacattcatttcgtggaaccggttcaactacttta  23939000  Previous    Next  AGI:  At5g59300.1    Description:  UBC7 (UBIQUITIN-CONJUGATING ENZYME 31); ubiquitin-protein ligase. Identical to Ubiquitin-conjugating enzyme E2 7 (UBC7) [Arabidopsis Thaliana] (GB:Q42540;GB:Q8RXQ3); similar to UBC13 (ubiquitin-conjugating enzyme 13), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT3G46460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15629.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608); contains InterPro domain Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135) Range:  from: 23937094    to: 23938517    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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