Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->ANAC58                                                                                           --------->ANAC58                                                                                           --------->ANAC55(1)                                                                                           --------->ANAC46                                                                                           <---------ANAC55(2)                                                                                           --------->ANAC55(2)                                                                                        <---------ARR14(2)                                                                                        --------->ARR11(1)                                                                                      --------->MYB59                                                                                      ----------->ARR10                                      ----------->HVH21                           <---------ZAT6                                    --------->At4g35610                          <---------TOE1(3)                                    <---------At4g35610                          <---------TOE2(3)                                  <-----------RAV1(2)   --------->YAB1     <-------TEIL --------->ARR14(2)                              --------->MYB46(3)       <------ZmHOX2a(2)--------->CCA1(2)  ----------                        --------->At4g35610     --------->MYB46(3)     <---------ARR11(3) <-------TEIL ---->YAB1              <---------At4g35610--------->ANAC46            --------->ARR11(3)--------->CCA1(2)   atccgatgatacagcgaaactccatcagcagaacgaccagatgacacaaaaccatcgatcatagcagtgtatagatatacattagggttagatacgtaac  23907400                                                                                               ------                                                                                               <-----                                                                                              -------                                                                                          ------>ZmHOX2a(1)              <------NtERF2                                                               ===========            <---------ANAC58                                                          <---------ARR11(3)            <---------ANAC58                                                         <------MYB83         <---------DEAR3(1)                                                          <---------HSFB2a(1)       <---------SPL7                       --------->ANAC58          --------->ARR11(3)  --------->ICU4    <-----------HVH21--------->ANAC46       --------->ANAC55(1)    --------->ANAC58  --------->HSFB2a(1)   <---------O2   --------->ETT(2)          <---------ANAC55(2)    --------->ANAC58  --------->HSFC1(2)   --------->bZIP60(2)                      --------->ANAC58     ---------->DOF2     <---------HSFC1(2)   --------->O2   <---------WRKY38(1)      <---------LBD16      ------->GAMYB--------->WRKY18(1) ----   --------->ANAC46 <---------LBD16  <---------At4g35610     --------->MYB52(1)      <------MYB46(1) ->GT1<---------ANAC46           --------->ALFIN1           <----------ID1  <-----------HVH21<-------   taaacacgtcgtaggcgtagtcgacggaatcgagagtggagcaaacacggataagttcgaaaacaacgaaagcatcttggtcatggaaggtcctaatgat  23907500                                                                       ---------->DOF2  <---------ANAC58                                                  --------->LBD16  <---------ANAC46                                                 <---------ANAC58  <---------ANAC58                                                 <---------ANAC58 --->ARR11(3)                                                      <---------ANAC46                 - ----ARR11(3)                          <-------TEIL              ------>ZmHOX2a(1)                  - -->YAB1                            <---------At4g35610         --------->TOE2(2)                   - ===HOX2a_HOX2a                     --------->At4g35610        <---------ANAC58                  <--- -->ZmHOX2a(2)                      --------->ZAT2             <---------ANAC58                 <---- --ATHB12                           <---------ZAT2      <---------TOE2(3)                   <--------   cttggcgtgaatcgatggaacatgggcaatgttcttgcagcttcgtaatacagagattaatgttttcctgcgtgaaagcctgagagtgtttgaatcggga  23907600      ---------->DOF2     <------NtERF2    --------->LBD16   --------->RAP2.6(2)               --------->ANAC58                             <---------------AGL15   --------->LBD16            <---------At4g35610                             <---------MYB52(1)  <---------LBD16             --------->At4g35610                           ----------->GT1 -------->ANAC46             ------>ZmHOX2a(2)      <---------ANAC58     ------------>MYB.PH3(1) -------->ANAC58         ----------->HVH21          <---------ANAC58--------->GLK1(2)          <----- -------->ANAC58        <---------MYB52(1)     <---------ICU4      <---------ARR14(2)          ------ ---ZmHOX2a(2)         --------->LBD16        --------->ICU4       <---------ARR11(3)         <------ -------HVH21        <---------LBD16 --------->ANAC58              --------->ARR14(2)         ------- -LBD16            <---------SPL7------>NtERF2<---------ATHB12     <---------GLK1(2)      <-------GAMYB   tcacgccggaaagttgaaggccctccggtgatcgctgccaaggaagaaatcatttcgcgctcaattgaagattctaaaccgttacaattttcggttataa  23907700                                           <-------GAMYB                                          <---------MYB46(3) ----ICU4              ----------->GT1    --------->MYB52(2)         --------->ANAC58 --->YAB1 --------->ANAC58      --------->DAG2                       --------->ANAC58 ---YAB1  --------->ANAC58     ---------->DOF2                     --------->TOE1(2) -->ICU4  --------->ANAC46    ---------->DOF2      ----------->GT1 --------->TOE2(2)       --------->ETT(2)   ttagcccaatccaagtaaaatgggcctgtaacaaaaggcccagttcgttgatgaagataaaaaaaaaaaccaaggaaaccaatttgaacattgtcgagat  23907800                                                                                           ----------                                                                           --------->HSFC1(2)                                                                           <---------HSFC1(2)                                        <---------HSFB2a(1)                --------->HSFB2a(1)                                        --------->HSFB2a(1)           --------->DEAR3(2)----------->RAV1(1)                               ------>MYB83                          ------->TEIL  <---------ATHB12                               ------>MYB46(1)                      --------->MYB52(1)  ------------>AtMYB77                             <---------MYB59 --------->HSFB2a(2)  <---------MYB52(2)   --------->MYB46(3)                       --------->HSFB2a(2) ------>MYB83      <------ZmHOX2a(1) ------------>CBF    --------->GLK1(2)  <---------HSFB2a(2) ------>MYB46(1) <---------TOE2(3) <----------DOF2    -----   ttagaaattcggtttagtctcacttctataaccaaactccaaaccttccaaaatcaaacttgaggaaaacgaaccgaagctttcaatgaacaacagttac  23907900                                                                                       <---------AHL20(1)                                                                                       --------->ARR11(3)                                                                                       <---------ARR11(3)            <------------CBF                                                           <---------AHL20(2)           ------>MYB83                                                                --------->AHL20(1)           ------>MYB46(1)                                                             --------->AHL20(2)         <---------MYB59                                                              --------->AHL20(2)     ------->GAMYB            --------->DAG2                                        --------->AHL20(2)    --------->MYB46(3)       ---------->DOF2                                      <---------AHL20(2)    <---------MYB52(2)  ----------->GT1          <---------ZAT18                  --------->AHL20(2)  --------->MYB52(1)  ---------->DOF2     <-----------GT1                        --------->YAB1 ->GT1 ------->TEIL  <---------ATHB12    <-------TEIL<---------MYB52(1)         ----------->TBP ---->REM1(1)    ------------>CBF<---------ZAT6 ---------->ID1             ---------->ID1  ----------   aacacaacgaaccaaattgttcaataaagaaaaaagtgttagattcacttgtccccttggttctaaatagatgttttgttgtataaaaatatattcaata  23908000                                                           <---------At4g35610                    ================================HOX2a_HOX2a                    ------>ZmHOX2a(1)                 <---------ANAC58              <---------MYB46(3)                      <---------ANAC58            <---------MYB52(1)              --------->ARR14(2)        <---------ZAT18                     <---------ARR14(2)      <---------ZAT18                    <------------MYB.PH3(1)     <---------At4g35610     --------->ALFIN1     <---------At5g28300<------ZmHOX2a(2) --------->ATHB12 -->CBF --------->ZAT18  <-----------GT1 --------->MYB46(3)--------->At4g35610   ctcagaagtgtgcccttggttcctgattcactgtgccactgtaaccgatccatcttgcttcagcttgattaagctactctctatgtttctaagcacaggt  23908100                                                                        --------->LBD16                                                                       <---------ANAC58                                                                       <---------ANAC58                                                                       <---------ANAC55(1)                                                                       <---------ANAC46                                                 --------->TOE2(3)     --------->ANAC55(2)                                               --------->GLK1(2)       <---------ANAC55(2)              --------->YAB1             <------ZmHOX2a(1)        <---------HSFB2a(1)        --------->ANAC58           --------->ANAC58               --------->HSFB2a(1)        --------->ANAC58           --------->ANAC58               <---------HSFC1(2)            >>>>>  --------->At4g35610              --------->ANAC46               --------->HSFC1(2)        ---------  <---------At4g35610          <-----------GT1<---------GLK1(2) ---------->DOF2          --------->LBD16   ttatagctgcaagaaatcgtaatagaaaacaattaacaagacaggatagaatctcaatggattgaagaaagttccgtgagaaacttacatgcgcataagc  23908200                                                            <--------ATHB1                              --------->At4g35610           -------->HAHB4                    <---------ANAC58                        <---------ICU4                <---------ANAC58                            --------->ATHB12                <---------ANAC46                           --------->ICU4           <-----------RAV1(1)<---------At4g35610          <---------YAB1       <---------ANAC58       <---------ZAT2       --------->At4g35610 --------->ZAT14     <---------YAB1 <---------ANAC58               <---------At4g35610 <---------ZAT14 >>>>>>>>>>>>LFY<---------ANAC58       --------->ALFIN1--------->ARR11(3)       <----------DOF2 ----- ->DOF2<---------ANAC58       --------->ZAT2<------ZmHOX2a(1)     <---------At4g35610 <---------TOE1(2)   ccattgtatgcttgtgttgcttgctggagttgagctgagagttggaggacttgagcagataatgattccgctctgctctgttctttcgcaagttcaccct  23908300  Previous    Next  AGI:  At5g59200.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT4G37380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22295.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 23906019    to: 23907791    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g59210.1    Description:  myosin heavy chain-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G32240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21574.1) Range:  from: 23907832    to: 23910891    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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