Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    --------->AtMYB61                                                                                ------>MYB83                                                                                ------>MYB46(1)                                                                                -------->P                                                                               --------->MYB55(1)                                                                              <---------MYB111(1)                                                                              <---------MYB46(2)        <-----------ARR10                  --------->ANAC58                   <---------MYB55(2)        <---------ARR11(3)            --------->LBD16                         <---------MYB111(2)        --------->ARR11(3)          <---------LBD16 ------>NtERF2             --------->AtMYB61        <---------ARR11(1)   <---------ANAC58      --------->ANAC58           --------->MYB46(3)  ---        --------->ARR14(2)   <---------ANAC46      --------->ANAC58 --------->HSFB2a(2)  ------>MYB83        <---------ARR14(2)   <---------ANAC58      --------->ANAC46 --------->LBD16      ------>MYB46(1)       <---------CCA1(2)<-----------RAV1(1)--------->ANAC58         <---------HSFB2a(2)<---------MYB59 -----------AtSPL8      --------->ALFIN1 ---------->DOF2  <----------DOF2 --------->MYB46(3)   ------   agtactggcaaatcttctctagtattgtggtgcttatatcagggaaagtcactacgccatctttcgattccgagaaaccacctaccataccaaataacaa  23892500                                                                             --------->ANAC55(2)                                                                             <---------ANAC55(1)                                                                             <---------ANAC46      --------------->AGL15                                                  --------->ANAC55(1)      <---------------AGL15                      ------->TEIL                <---------ANAC58     <-----------------AGL2                   <---------YAB1                 <---------ANAC55(2)     <-----------------AGL3               ------>ZmHOX2a(2)                  --------->ANAC58     ----------------->AGL3             <---------ARR11(3)                   --------->ANAC46     ----------------->AGL2             --------->ARR11(3)                 <-----------GT1 <---------YAB1   <-----------GT1                     --------->YAB1           <----------DOF2        <---------GLK1(1) ---->GAMYB <-----------GT1          <---------KAN4(2)      <---------ANAC58 <---------ANAC58 ----->RAV1(1)                    <---------TOE2(3)         <---------ANAC58 --------->ANAC58      --   cagaattactaaatttagcatctacataatgaaattgagaatgatcttatgaatttggacttgcttctttattcaaattacgtaattgaatttccgattg  23892600                                                                                  --------->ANAC46                                                                       --------->WOX13(1)        <---                                                                    --------->GLK1(2)           <----                                                                    <---------ARR14(2)          <----                                                                    --------->ARR14(2) <---------At4g35610                                                                   <---------GLK1(2)   --------->At4g35610                                                         <---------ANAC55(2)      --------->ANAC58 ------->YAB1                   ------>NtERF2            --------->ANAC55(2)      --------->ANAC58   agcataatctctcgctaaatttctctcaaattgaggccaattcacaactaaatcagattaagtatcacagaatccatcaaatccaagtaagatgactaga  23892700       --------->ATHB12      <---------YAB1    --------->YAB1          ===============================RAV  <---------ARR11(3)        ----------->RAV1(1)  <---------ARR14(2)  --------->ZAT6  --------->ARR14(2) ------>MYB46(1)  --------->ARR11(3) ------>MYB83  --------->GLK1(2)  -------->P                                                               <------ <---------GLK1(2) --------->MYB46(3) <------ZmHOX2a(1)                --------->ARR14(2) <---------RAP2.6(2) ---ZmHOX2a(2) ==============================HOX2a_HOX2a               <---------ARR14(2)--------->RAP2.6(3) -----ARR11(3) <------ZmHOX2a(2)---------->DOF2 <---------LBD16     <---------ANAC46 --------->TOE2(3) -----AGP1  <---------YAB1 --------->REM1(1)   ----------->RAV1(2) <---------LBD16   --------->TOE1(3)   tcagaatcttgattacgatcaccaactctacaacaaaagaggagaagaaacctggagaagtgagcatgcttcggatagtctgagaaaccatagcggcttc  23892800                                                                       --------->At4g35610                                                                       <------NtERF2                                                                      ------>NtERF2                                                                      <---------DEAR3(2)                                                                     <---------DEAR3(1)                                                                    <------NtERF2                            <---------ANAC58                        --------->ATERF1(1)                            <---------ANAC58                       <---------SPL7                          --------->AtLEC2                         <---------ATERF1(1)                      ------>MYB46(1)                             <---------DEAR3(1)                      ------>MYB83                               <------NtERF2                      <                   <---------HSFB2a(1)    --------->DEAR3(1)   <---------DEAR3(1)       <----------DOF2  <---------ETT(2) --------->HSFB2a(1)  <---------At5g28300   <------NtERF2         ------>ZmHOX2a(1) ----DOF2     --------->ANAC46         <-----------GT1      <---------DEAR3(1) <----------DOF2      -   tctgtcgatgacgaactcgaaaccttccatgcttatcaacttcaccgtctctctcatcttcgtcgtcgtcgtcggcttaagctttcctctctttctctct  23892900      <------NtERF2      --------->ALFIN1    <---------O2    <---------ANAC58    <---------ANAC58    <---------ANAC46    <---------bZIP60(2)                    <--------P                                          <-----   <------NtERF2              ------>MYB83 <---------WOX13(1)                                <-------   ------>NtERF2      ---------->DOF2    <---------MYB46(3)                                 ---------  ------>NtERF2      *TSS     ------>MYB46(1)   ------>ZmHOX2a(2)                       <---------YAB1 <---------DEAR3(1)--------->ANAC58   <------------CBF                                <---------ICU4 ---------LBD16    --------->ANAC58  --------->ATHB12            ------------>CBF    --------->ICU4 -------->LBD16    --------->ANAC46 --------->ARR11(3)   <---------YAB1         ------>NtERF2--------   accgcggcgtggtttcttaactcgcaaagaccgactaagttattggttgatcccaaactattatgggctcaatttcaaacgaggcccattatgaattatg  23893000                                                     <---------At4g35610                                                     --------->At4g35610 ------>ZmHOX2a(1) --------->ETT(2)                              ------>ZmHOX2a(1)         <----------DOF2     <------- <---------ETT(2)     --------->ZAT18    --------->MYB59     <---------AHL20(1)           <---------YAB1 ----YAB1             <---------ZAT18 <---------ARR14(2)     --------->AHL20(2)           <---------AHL20(2) --ICU4       <---------YAB1          --------->ARR14(2)     --------->AHL20(1)  <-----------GT1 >ICU4      ----------->GT1       <-----------------AGL1     <---------AHL20(2) <-----------GT1 ->YAB1 --------->GLK1(2)       <-----------GT1<----------DOF2        <---------ATHB12<---------MYB52(1)   atgtctacataatcttgttattagcccactaaaatcaccctattcggtcctttttagctgaaatttattccaatccttttttttatccgtttttaattga  23893100                                                ----------->GT1                                                <---------ANAC46                         --------->GLK1(2)                                              --------->ZAT14        --------->YAB1     <---------GLK1(2)          --------------->AGL15       ---------->DOF2               <---------YAB1     ------>MYB83          <---------------AGL15      <---------AHL20(2) --------->ICU4                 ------>MYB46(1)   ---------->DOF2             ----------->GT1<-------TEIL <---------YAB1     ---------->DOF2 --WOX13(1)           --------->ICU4 <---------ATHB51--------->AHL20(2)<---------YAB1<---------MYB59   aattcaaaagaactattttgagaaatgactaatttgtaaataatgcggttcagtataaattatgaaatttttgataattcaaaagaaccaaattctgaca  23893200                                                                                 <------NtERF2                                                                                <------MYB46(1)                                      --------->TOE2(3)                         <------MYB83                                --------->ANAC58                               <---------DEAR3(1)                                --------->ANAC58                              <--------P                              ---------->DOF2                         <---------DAG2                       ---------->DOF2--------->TOE2(2)   <---------ICU4  <---------ANAC46         --------->HSFB2a(2)--------->ANAC58              --------->YAB1 <---------LBD16         <---------HSFB2a(2)--------->ANAC58        --------->YAB1    <----------DOF2              --  ---------->DOF2   --------->TOE2(3) --------->TOE1(2) <---------ARR11(3)--------->ANAC55(2)      --   ttttcaaagttatagaaaacaaacttaaagacgaaagaaaccttggaacatttatcaaaatcataaccagagctttacgggttggcgaaagatgtgattc  23893300               <---------ARR11(3)                    <-----------GT1               --------->GLK1(2)            --------->CCA1(2)               --------->ARR11(3)          <---------ARR11(3)       --------->YAB1         --------->ANAC58   ------->TEIL   <------ZmHOX2a(1)          ----------->GT1 --------->ANAC55(2)                   --------->ANAC46 ------->TOE1(2)              --------->ANAC58<---------ANAC55(2)          <---------ATHB12 ------->TOE2(2)  <----------DOF2          --------->ARR11(3)            --------->WOX13(1)      ----   acctaggaatcatacaaaatctttttgatcacaagtaaaacgagagatatgtattttactatttttctctaatcccaatcagttacacataaaccaaaaa  23893400  Previous    Next  AGI:  At5g59140.1    Description:  SKP1 family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO21566.1); contains InterPro domain SKP1 component, POZ; (InterPro:IPR016073); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333) Range:  from: 23891637    to: 23892921    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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