Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             ------->GAMYB                                           --------->RAP2.6(2)        <---------GLK1(1)                  --------->DEAR3(1)        --------->GLK1(1)                  --------->ANAC46       <---------ARR14(2)                 --------->DEAR3(2)       --------->ARR14(2)                 --------->MYB46(3)      <------NtERF2                       <------------AtMYB77    <---------ANAC46                    ------>MYB46(1)--------->ZAT2                  --------------   <---------LBD16                      ------>MYB83   --------->At4g35610             <------------- --------ANAC58                         --------->MYB52(1)<-------TEIL               <------NtERF2 --------ANAC58              ---------->DOF2    --------->AtLEC2                    ------>NtERF2 -------ZAT2     --------->ARR11(3)   --------->AtMYB61<---------At4g35610         <---------ANAC46 ----->ARR11(3)  <---------ARR11(3)   <---------MYB59 --------->GLK1(2)     <-----------HVH21   agcttggcggatttacgaagaacttactagcaaaagaagaccaaaccgccatggagaagctgcattcaaagaatagatggtcacggcgtctatttttagt  23862000                                                                                      --------->ANAC46                                                                                      --------->ANAC58                                                                                      --------->ANAC58                                                 ------------>CBF                  <------NtERF2<----                          <------NtERF2         --------->TOE2(3)                --------->ANAC58                  --------->YAB1             ----------->RAV1(1)                 --------->ANAC46    <-----------GT1  ------>ZmHOX2a(2) --------->ZAT6      ----------->HVH21     --------->ANAC58   *TSS          <---------YAB1      <-----------GT1  --------->YAB1      <---------ANAC58      ----- ->AGL15       --------->YAB1   --------->AHL20(2) --------->WOX13(1)     <---------ANAC58     <----- --AGL15<----------DOF2 <---------DEAR3(1)  --------->REM1(1)---------->ID1     --------->RAP2.6(3)   attgttttccctttcaactatgatcgtcgtcgttttaaataaccctacaacatcaatcgtcttgacgtttttcttcgcttgagacggcacgcagtctata  23862100                                                                                --------->AHL20(2)                                                                                <---------AHL20(2)                                                <---------AHL20(2)             --------->AHL20(2)                                               <---------AHL20(2)          --------->AHL20(2)                                               --------->AHL20(2)          <---------AHL20(2)                                           --------->AHL20(2)              --------->AHL20(1)           --------->WOX13(1)              <---------AHL20(2)              <---------AHL20(1)       ----------->GT1                    <---------AHL20(1)              <---------AHL20(2) --------->HSFB2a(2)                      --------->AHL20(2)              --------->AHL20(2) -----ARR11(3)    --------->YAB1          <---------AHL20(2)          <---------AHL20(2) ---->ARR11(3)    ----------->GT1   --------->TOE2(3)              ----------->GT1    --------->MYB52(1) ----CCA1(2) <---------ATHB12       --------->TOE1(3) >>>>>>>>>GATA-1 --------->AHL20(2)   tctctcgaattgtaaatcaatagttattttctcttaaaccctaatttaattttatagataaatcgagtttagttaaataaatttaaaaaaacgatttgag  23862200                          <------NtERF2                         <---------RAP2.6(3)                         <-----------HVH21                         ------>NtERF2                    --------->ANAC55(2)                        --------->RRTF1(2)                <---------TGA1a                        --------->RAP2.3(2)               <------NtERF2                        <---------bZIP60(1)               --------->TGA1a                        --------->bZIP60(1)               <---------ANAC58                        --------->DEAR3(1)                <---------ANAC58                        --------->RRTF1(3)                <---------ANAC55(2)                       --------->ORA47(2)               <---------ANAC46                       <------NtERF2                    <---------ANAC58                       --------->ERF1                   <---------ANAC58                       --------->RAP2.3(1)             <------NtERF2                       --------->RRTF1(1)              --------->ATERF1(1)                      <---------ZAT18            <---------LBD16                      ------>NtERF2             --------->MYB52(1)                      <---------ATERF1(1)      ----------->HVH21                                   --                     --------->DEAR3(1)       <-----------HVH21                                   <--                  <---------ALFIN1           --------->bZIP60(1)                               <-----                  --------->AtMYB61          --------->bZIP60(2)                              <------                --------->MYB52(1)           <---------bZIP60(1)                            ------->MYC2               ------->GAMYB             --------->At4g35610                                <-------MYC3               --------->AtMYB61         <------NtERF2<---------ATERF1(1)                   ------->MYC3              --------->MYB46(3)         <---------At4g35610                  --------->AHL20(2)  ---              <---------MYB55(2)        <---------ATERF1(1)               <---------YAB1    ------->PIF4            --------->WOX13(1)         <---------DEAR3(1)------>NtERF2  --------->YAB1      <-------PIF4           <---------WRKY12           <------NtERF2   <---------DEAR4(2)--------->TOE2(3)   <-------PIF5          --------->WRKY18(1)      <---------LBD16   <---------DEAR3(1)<---------YAB1       ------->MYC4        --------->ANAC58--------->RAP2.3(3)  --------->REM1(1)   --------->ZAT14            <-------MYC2        --------->ANAC58--------->bZIP60(2)----------->RAV1(1)   <---------ZAT14            ------->PIF5   tctctctctcaagtcaaccaccagcgccgtcatatttctcggcagcgacatcacggaggcgcgtgactatactacgataattcaatagagagcatgtgca  23862300                                                                                              <------                                                                                              <------                       --------->TOE1(3)                                                  --------->AHL20(2)                       --------->YAB1                                                     --------->AHL20(1)                       --------->TOE2(3)                                                  <---------AHL20(1)  <---------ANAC46  --------->YAB1                                                   ------------>CBF --------->HVH21 --------->YAB1                                        <-------TEIL --------->YAB1 -----MYC3   --------->ANAC58                                  <-----------GT1     ----------->HVH21 ----AtLEC2  --------->ANAC46                             <---------DAG2         <---------At4g35610 -TEIL--------->HSFB2a(2)                           --------->WRKY18(1)------------>CBF   <---------AHL20(2) ---->MYC3   --------->ANAC58          <---------ATHB12   <----------DOF2        --------->At4g35610   tgtgacttagagaacacgacaataatcttaaatctaatctaatcaagtctcttggtcaaactttttttcaagattcaatcgaccgatgacaattaattac  23862400                                                   --------->ZAT6                         <----------DOF2        --------->WOX13(1)                         <---------DAG2   <-------TEIL                        *TSS             --------->ARR14(1)                      <-----------GT1    --------->CCA1(2)                      ------->TEIL      <---------ARR14(2)                   <---------REM1(1)    --------->ARR11(1) -----GT1          ----------->GT1      <---------GLK1(2)                                   <-------- ---AHL20(2)  ---------->DOF2           --------->ARR14(2)                     --------->YAB1<-------   ttcttcttatttctcttaaagatgtaactttttgggtttcaagattcgatctatcacttcccatggctagagaaaacccattgatgagcttctcctttag  23862500     <---------ARR11(3)     --------->ARR11(3)                                                  --------->ZAT14    <---------GLK1(1)                                                  --------->ANAC46    --------->GLK1(1)                                                  --------->bZIP60(2)       ----    <---------RVE1(1)                              <----------DOF2   <---------ALFIN1    <----------DOF2   --------->ARR11(3)                      <----------DOF2        --------->ANAC46 <---------ANAC58   <---------ARR11(3)                 ------>ZmHOX2a(1)   ----------------------->TaNAC69(2)    <---- --DOF2         <----------DOF2     <------------------------ANAC81----------->RAV1(1) ---------->ID1 --MYB52(1)<-----------HVH21 ------>ZmHOX2a(1) ---------->ID1   --------->ANAC46   <---------ANAC58--   tttcagatatctctgtcactttgctctactcctctctctcctctcctttgtctcttttctcttcagacacaacacatcactctgttcttgtctttacgat  23862600          --------->DOF5.7(2)         --------->TOE2(3)         --------->TOE1(3)       <---------TOE1(2)       ------>MYB46(1)                                                       --------->HSFB2a(1)       ------>MYB83                                                          <---------HSFB2a(1)       <---------TOE2(2)                                                     --------->MYB46(3)     --------->TOE2(2)                                                       <---------HSFC1(2)     --------->TOE1(2)                                     <---------GLK1(2) --------->HSFC1(2)  <---------ALFIN1           --------->At4g35610   ------>ZmHOX2a(2)  <---------AtLEC2 ----->YAB1               --------->At4g35610    --------->ARR11(3)   <---------ANAC46 --ZmHOX2a(2)           --------->YAB1           <---------ARR11(3) <---------YAB1    <----------DOF2 ------->ANAC46        <------ZmHOX2a(2)   --------->MYB46(3)     <---------At4g35610 <---------DAG2-   cacaacacctacgttaacacattcgatcatcagcaaaacaatgaaaccatcgatcttcttcgattctcttctgcttggaaccatctcactttcccttcta  23862700                                 --------->ANAC58                                 --------->ANAC58                              --------->WRKY18(1)                            ------->MYC2                            <---------MYB46(3)                <---------ZAT18------->MYC3                           <---------AtMYB61                  <---------DEAR3(1)                        --------->ALFIN1                  --------->ALFIN1   <-------MYC2                        <---------AtMYB61               --------->ZAT2       <-------MYC3                      <-----------RAV1(1)               <---------At4g35610 --------->ANAC58                   ==================================HOX2a_HOX2a            --------->ANAC58                   ------>ZmHOX2a(2)            --------->GLK1(1)         <---------ALFIN1                  ===================================HOX2a_HOX2a<---------PCF2                  <------ZmHOX2a(2)             <---------GLK1(1)      <--------------OsCBT                 --------->ARR11(3)           <------ZmHOX2a(1)<---------DEAR3(2) -------->TOE1(2)<---------ARR11(3)        <------NtERF2<---------ZAT2 ----------->HVH21  ------->TEIL   aacccaagaagactctcaagatcgctgtggtggtcaagaaatggccgaggaaatcgcaagctggtgggctcgagcgacacgcgcttacattgcatctcgc  23862800                                                                                                    <                                                                                                    -                                                                                                   --                                                                                                  <--                                                                                                  ---                                                                                                  <--                                  --------->At4g35610            ------->GAMYB                   ----                    <----------DOF2  <---------At4g35610       --------->At4g35610               ----                <-------PIF5      <---------At4g35610 --------->LBD16                            ----                ------->PIF5   <---------At5g28300   --------->LBD16                <---------CCA1(2)       --------->YAB1<-------TEIL--------->DEAR3(1) <---------ANAC46   --------->GLK1(2)        -----      <---------ATHB12        <-----------GT1       <---------LBD16    <---------ARR11(3)      ------   tctagccaatcgtggccacgagcttcatgttttcaccgctgcttctccatcgttccctgaatatcaactgaaaaatctgatgttccatctctctgagcca  23862900  Previous    Next  AGI:  At5g59060.1    Description:  similar to glucose transmembrane transporter [Arabidopsis thaliana] (TAIR:AT5G18880.1) Range:  from: 23861527    to: 23862003    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g59070.1    Description:  glycosyl transferase family 1 protein. similar to glycosyl transferase family 1 protein [Arabidopsis thaliana] (TAIR:AT4G19460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21557.1); contains InterPro domain Glycosyl transferase, group 1; (InterPro:IPR001296) Range:  from: 23862424    to: 23864619    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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