Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            ----------->GT1                                          <----------ID1                                 --------->ANAC58                                 --------->ANAC46                                <---------ZAT2                                 --------->ANAC58                                --------->At4g35610                              ------>ZmHOX2a(2)                                  --------->ZAT2                             <------ZmHOX2a(2)                                   <---------At4g35610                            --------->ARR14(2)                        --------->TOE2(3)                      ----------->HVH21 --------->DAG2               ----------------->AG          --     --------->ARR14(2)     <---------ARR14(2) --------->GLK1(1)   <-----------GT1               ----     <---------ARR14(2) <---------LBD16---------->DOF2    <---------LBD16   --------->YAB1  ---------   aatttcagatttgattcaaaacttttgacggatccaagaaaaaaaggagaaatcaaaaatttcggaaattaaccaaaatcgtaagctcggagaagaaaga  23847300                                                                                                <----                                                       --------->ICU4                          <-----      ---------->TaMYB80                             --------->YAB1                            ------    --------->At5g28300                             --------->ICU4                         <---------AHL20(2)   ----------->GT1                             --------->ANAC58                           --------->AHL20(2) --------->HVH21                               --------->ANAC58                        --------->YAB1 ----->CCA1(2)---------->DOF2             --------->MYB52(1)  --------->ZAT2   <---------ARR14(2) ->DOF2   <-------TEIL    --------->GLK1(2) --------->ANAC46  <---------ZAT2   --------->ARR14(2)   gacgacggtatatacataaatcgctaagaatttgttcttaaaatcaacgaagcaaaaatgatcaagctccgatttgaatcgaattcgaaacataaaattt  23847400                                         <---------ANAC58                                          --                                         <---------ANAC58                                    --------                                   --------->ANAC58          --------->ANAC58                --------                                   --------->ANAC58          --------->ANAC58               ---------                            --------->ANAC58                --------->RAP2.6(3)            --------->MYB52(1)                            --------->ANAC58               --------->ARR14(2)         --------->MYB52(1) -----AHL20(2)              --------->ANAC46               --------->MYB52(1)     --------->At4g35610 ----AHL20(2)  <---------------AtSPL8    ----------->GT1   <---------ARR14(2)     <---------At4g35610 --->AHL20(2)  --------------->AtSPL8---------->DOF2--------->TOE1(2)    ----------->GT1--------->ANAC46   aatctaggtttagttagattgtacatatataagcaaaacgaaagcgtgataaaacctagaagaacggcattgaagtggtttatcagcttaacgaaacggc  23847500                                                                                                  ---                                         --------->TOE1(2)                                      -----                                       <-----------------------TaNAC69(2)                      ------        --------->AtMYB61             <---------ARR14(2)                                       ------        <---------MYB59               --------->GLK1(2)                                        <-----        ------->GAMYB                <---------GLK1(2)                                         ------       --------->MYB46(3)         --------->LBD16                  --------------->AGL15       ------ ------->ICU4      <----------ID1--------->LBD16                   --------->TOE1(3)          ------- ->ANAC58 ------>MYB46(1)       <---------HSFB2a(2)     ----------->GT1                       ------- ->ANAC58 ------>MYB83      <----------DOF2    ---------->DOF2  <-----------GT1             --------- >RAP2.6(3)    ---------->DOF2  --------->HSFB2a(2) ---------->DOF2--------->TOE2(3)        <--------   aatgtttcaaccaaacccaaagcgaagaaactttcccgagaatcgtgggaaaagaaaagagtaaaattacctcaaacagcgaagagaaaatgcagaaccg  23847600           ----------->HVH21        <---------DEAR3(1)    --------->AtMYB61    <---------ALFIN1   --------->MYB46(3) ------>ANAC46                                                                             --------->CCA1(2) ------>RAV1(1)                                                                            <------ZmHOX2a(2) --->DREB2C(2)                                                                            <---------ARR11(3) --->DEAR3(1)--------->ATERF1(1)                                                          <---------ARR14(2) ----ETT(1)--------->DEAR3(1)                                                             --------->ARR11(3) --->At1g77200<---------ANAC46<-------TEIL                                        --------->DAG2 ----->HVH21 <------NtERF2  <---------ARR14(2)                    <------ZmHOX2a(1)       ----------- -->DEAR3(2)------>NtERF2   --------->ARR11(3)                    ================================HOX2a_HOX2a -->MYB46(3)<---------ATERF1(1)                                *TSS  ----------->GT1      --------->ARR14(2) >ARR14(2) <---------DEAR3(1)--------->CCA1(2)           --------->YAB1       --------->At4g35610 -ARR14(2)<------NtERF2     --------->ARR14(2)      <-------TEIL<---------TOE2(3)---------->DOF2   acacaaccactcggcgacggagaagacgaagatacagagagtgagaaacagagattcaaaaatactaaggagagtgaatcagcaaaagtgaagatccaaa  23847700                                                                                --------->ALFIN1                                                                             <---------DEAR3(1)                                                                            --------->SPL7                                                             <----------ARF1<---------ORA47(1)                  ------>ZmHOX2a(2)                      --------->LBD16  <---------SPL7          --------->ZAT14                               <---------LBD16   ----------->HVH21          <---------ZAT14                               --------->TOE1(2)------>ZmHOX2a(2)       ----    --------->MYB52(1)                             ----------->HVH21  --------->ATHB12       -------- ------------->ANAC81        ---------->DOF2   <------------CBF      <---------YAB1       <---------TOE2(3)   aaaaaaaaacagagaagtgatcgattcacataaaagctacagagagagagattgtgaccctgggagagaagatgatcggacggtggagaatgaaggaaag  23847800                                                                  ------->MYC3                                    --------->LBD16         --------->PCF2                                   <---------ANAC46        --------->PCF5                                   <------NtERF2           <---------PCF2                                  <---------LBD16          --------->TCP16(1)          <---------ANAC55(1)                                 --------->ALFIN1        <------MYB46(1)               <---------ANAC58                                 <---------ANAC58        <------MYB83   --------->ARR11(3)                                 <---------DEAR3(1)      <---------MYB46(3)            --------->ANAC55(2)                 <---------GLK1(2)------>NtERF2         <---------AtMYB61    <-----------GT1           <-------GAMYB         <---------ANAC46       --------->ALFIN1<---------ARR11(3)  <--------    <---------ATHB12      <------ZmHOX2a(1)         >>>>>>>GRF7<---------ALFIN1        <---------ANAC58 ------->GT1   <---------TOE2(3) <---------ANAC58<-----------HVH21<-------MYC3         <---------ANAC55(2) -->DOF2  <---------MYB46(3)    --------->ATERF1(1)<-----------RAV1(2)------->TEIL     <---------ANAC46   ggttaaatcatgcggttgagattatcgaggaaggggcgcgggaatggtttatgtcagggtggtccccacatgtatatattcacatgtttacgtgtgctca  23847900                                                                 ------>ZmHOX2a(1)                                                                <---------------AGL15                                                                --------->TOE1(3)                                                                --------->TOE2(3)                ----                                                                --------------->AGL15         -------                                                          <---------DAG2                 --------->CCA1(2)        <---------GLK1(1)                        <---------AHL20(2)                     <---------ARR11(3)        --------->GLK1(1)                        --------->AHL20(2)                     --------->ARR11(3)       <---------ARR11(3)                       --------->AHL20(2)                <---------AHL20(2)       --------->ARR11(3)                       <---------AHL20(1)               --------->ICU4  <--- --------->YAB1                    --------->ANAC46       <----------DOF2        --------->AHL20(2) -At4g35610                    --------->YAB1   <---------AHL20(2)       <---------GLK1(2) <---------   ttagcataagatttccaccataaactgacaaaattatactccaaaaacaatttaattccactttttccttaaaaagattagcatttattagatatacagt  23848000                                  <---------WOX13(1)                                --------->ATHB12                               --------->ICU4                                    <----------DOF2                               <---------YAB1                               <---------RAP2.6(2)                             --------->ANAC55(2)                   <----------DOF2         <---------ARR11(3)                             <---------ANAC55(2)                  <---------ANAC58         --------->ARR11(3) ----->ZAT14           <---------AHL20(2)                         <---------ANAC58       --------->ETT(2) ---->GT1             --------->AHL20(2)           --------->AHL20(2)      <---------At5g28300<------ ------ZAT14       --------->ATHB12               --------->AHL20(2)      <-----------GT1<---------ETT(2) --GT1           <---------WOX13(1) <-----------GT1<---------AHL20(2)   <----------DOF2--------->ZAT14   ataatgtcaacacaatgtgaatgatttaatcacatgattaacatcacagaaaataaatcacatgttttgctttgttttacggcctttactgtagaccttt  23848100                                                                                               <-----                                                                                           <---------AHL20(2)                                         --------->AHL20(1)                               <---------ARR11(3)                                         <---------AHL20(1)                               --------->ARR11(3)                                         <---------AHL20(2)                               --------->AHL20(2)                                         --------->AHL20(2)                               <---------AHL20(2)                                         --------->ARR11(3)                               --------->AHL20(1)                                         <---------ARR11(3)                               <---------AHL20(1)                                <--------ATHB1                                           --------->AHL20(2)                                --------->ATHB12                                       --------->AHL20(2)               <---------YAB1  <---------ATHB12                                      --------->AHL20(2)             <---------AHL20(2)--------->ICU4                                       --------->YAB1     --------->AHL20(2)        <---------YAB1                 <---------AHL20(2)   --------->AHL20(2) ----DOF2----------->GT1     --------->YAB1                  --------->AHL20(2)  --------->YAB1<-----   gacaaaaaaaaatgtttattttagataactacaatgatttgaatatattacaaatatcacaaattatatcgagacgatttctaaaataaaaatatattta  23848200  Previous    Next  AGI:  At5g59020.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G29510.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70168.1); contains InterPro domain Tubby, C-terminal (InterPro:IPR000007) Range:  from: 23844201    to: 23847663    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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