Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              <--------                                                                                            ---------                                                                                            ---------                            ----------->RAV1(1)                                      --------->ANAC46                           --------->ANAC46                                   --------->ARR14(2)                       <-----------GT1  <----------DOF2                       <---------ARR14(2)     --------->At4g35610 --------->ANAC46    --------->ZAT6            <---------ZAT14      <-------- <-----------HVH21 <----------DOF2  <------ZmHOX2a(1)         <---------ZAT14 --------->GLK1(2)   atcggtcatcttcaagtctgcctttatacacaacattaggagctttaacaccatgttcggagacaatactgtctgtagagaatccacaagtagcagctcg  23840100                                              --------->DOF5.7(2)                                              <---------MYB52(1)                                            <---------ANAC55(2)                                       <---------MYB46(3)                                 <---------ARR14(2)                                 --------->ARR14(2)                             <------NtERF2  --------->ANAC55(2)                             --------->At5g28300   --------->WOX13(1)                            ------>NtERF2   <---------ANAC58  <------MYB46(1)         --------->RAP2.6(3)<-------GAMYB  <------MYB83           --------->MYB52(1) <---------ANAC58 -ZAT2                <---------DOF5.7(2)<---------MYB52(1) >At4g35610        --------->LBD16     <---------DEAR3(2) >ZAT2            <---------ANAC46    --------->SPL7  --------->YAB1                   --------->At4g35610 -At4g35610       <---------ANAC55(2) <---------TOE1(2)                                <---------At4g35610   tagttggtcgaaactaaactccgtaaacgacggcaaatcgtccgttccgttatctatcagaacaaaaaacaaaaaactcaaactttgttagcagagagag  23840200                                                                                           ------->GAMYB                                                                                         ------>MYB46(1)                                                                                         ------>MYB83                                                                                        --------->MYB52(1)                                                                                        ----------->RAV1(1)                                                                                       --------->AtMYB61                                                                                       --------->MYB46(3)                                                                                       <---------MYB55(2)                                                                                      <---------MYB52(2)                                                                                      --------->MYB46(3)                                                                                     ------>NtERF2                                                                                    --------->RAP2.6(2)                                                      <-------TEIL               <---------ATERF1(1)                                                   <---------HSFB2a(1)           <---------DEAR3(2)                                                   --------->HSFB2a(1)          <---------DEAR3(1)                                                   --------->HSFC1(2)           <---------RAP2.6(2)                                                   <---------HSFC1(2)          --------->ATERF1(1)             <----------DOF2                 <------ZmHOX2a(2)    --------->ATHB12<------NtERF2     <   --------->DAG2                           <---------ARR11(3) <-------GAMYB  <-----------HVH21     - ---------->DOF2        >>>>>>>>>TBF1       <---------AGP1     <---------At4g35610--------->ATERF1(1)   tgtgaaaggtagagactttaagtgaagaagaagttgttatcacctagatcagaagcttcgttgtgagttgatttgagatgggtcggccaccaacagagag  23840300                                                                                --------->ANAC58                                                                                ----------->GT1                  ----------------->AGL3     <------ZmHOX2a(1)                  --------->ANAC58                  <-----------------AGL2   <---------TOE2(3)       <---------At4g35610                --------->PCF2             <---------TOE1(3)       --------->At4g35610     <---------                --------->PCF5         --------->CCA1(2) <---------GLK1(2)     --------->DAG2 ---------At4g35610                   <---------ARR11(3) <---------ARR11(3)   ---------->DOF2 -------->At4g35610                   --------->ARR11(3) --------->ARR11(3)--------->ANAC46<---------DAG2   agagcttagagcaacgaggtcccattttggggttttgaaagatttaaggaagattgaaagatttttcttagctaaacccgaaaagcaaaaaccctttttt  23840400                                                                                     --------->At4g35610                                                                                     <---------LBD16                                                                                  <---------HSFB2a(1)                                                                                 <---------ARR14(2)                                                                                 --------->ARR14(2)                                                                                 --------->GLK1(2)                                        ----------->GT1                         <---------GLK1(2)                         --------->ANAC58                                  ---------->DOF2  ---------                         --------->ANAC58       ---------->DOF2         <------ZmHOX2a(1)  *TSS   ---                  ---------->DOF2       <----------ID1             <---------HSFB2a(2) --------->LBD16 -DOF2       <----------DOF2        ---------->DOF2                --------->HSFB2a(2) ----------->GT1   ttttctggtgagtcactttctaaagagaagccaagagagaaagagaaaaaaaaagaagttttttttgttctcgaggagaaaggaatctgcggaaaaaaat  23840500                                                                 <------------CBF                                                                -------->ATHB1                         --------->ANAC46                       --------->ATHB12                         --------->ANAC58                       <---------ICU4                         --------->ANAC58                      <---------ATHB12                      <---------ZAT18                       ------------>ATHB5            --------->AHL20(2)      --------->ANAC58     ----------->GT1             <----------DOF2   ----------->GT1    --------->ZAT18                    <---------MYB46(3) --------->DOF5.7(2) ----------->GT1 ---------->DOF2    --------->ANAC58    --------->ALFIN1   --------->TOE1(3)      --- >AHL20(2)  <---------AHL20(2)<---------ANAC46      <---------At5g28300    --------->TOE2(3)     <--- ------->DOF2 <-----------TBP --------->ALFIN1   <-----------HVH21        ----------->GT1      ------   gaaaggagaaaaatttatatatagcgcacgtagtggggaagacacagacacagtcacagtggtgaatcattgaaaaacgttaaacttctttcttcaacaa  23840600                                                                                      --------->TOE2(3)                                                                                    <---------TOE2(3)                                                                                    <---------TOE1(3)                        ------>ZmHOX2a(2)                                          --------->MYB52(1)                       <------ZmHOX2a(2)                                       <---------ARR11(3)                      --------->ARR14(2)                                       --------->ARR11(3)            <---------ANAC58                                ---------->ID1    --------->RVE1(1) <---------ICU4       <---------ARR14(2)                <----------DOF2       --------->CCA1(1) ------>YAB1<---------ANAC58                    <----------DOF2            <---------AHL20(2)      -- ------ATHB51    <---------ANAC46   <----------DOF2  <-----------GT1      --------->AHL20(2)      <-- --->YAB1 <-----------GT1   <---------ATHB12    <---------DAG2          --------->TOE2(3)  <---------   taataagtgtttttacttgttgtggatccaatgtttctctttctctctcgctttttcactttgtttttttttttcattaaatatctaacgtttatacatt  23840700                                                                                            <--------                                                                                    <-----------GT1                                                                                 -------->HAHB4                                                                                 --------->YAB1                                                                                 <--------HAHB4     --------->TOE1(3)                                                           --------->ATHB51     --------->TOE2(3)                                                           <--------ATHB1    ----------->GT1                                                              <---------ICU4   <---------TOE1(3)                                                            <---------YAB1   <---------TOE2(3)                               <----------DOF2              <---------ATHB51  <---------DOF5.7(2)                       <-----------ARR10                   --------->AHL20(2) ------->YAB1                              <---------CCA1(2)                    --------->ICU4      - -------YAB1     <---------YAB1 <---------------AtSPL8                        --------->YAB1--------- --GT1  ---------->DOF2         --------------->AtSPL8                    ----------->GT1  --------->AHL20(2)   ctgataacgttaaaacagtatttttgttcaattagtagtacattcaaatctcactttccaaatgaccaaaactatatagataataattacaaaattaata  23840800                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                   <-                                                                                                   <-                                                                                                 <---                             <---------YAB1                                                   -------                   <-----------GT1                                                 --------------->AtSPL8                <---------AHL20(2)                                                 <---------------AtSPL3       <-----------GT1      <---------TOE2(3)                                      <---------------AtSPL8     <---------AHL20(2)    <-----------GT1                                        --------->YAB1<---- -AHL20(2)   --------->AHL20(1)                                                  <---------ATHB51---- ------>TEIL <---------ARR11(3)      <---------HSFC1(2)                          --------->ICU4 <---- >AHL20(2)   <---------AHL20(1)      --------->HSFC1(2)                <-----------GT1      <--------   tgtatattttaacaatatttttttcttatttacgatggacacttctaacttctgtagtatttagaagaacaataaaccatacaattatgtacgatatcat  23840900 --------->LBD16 -------->ANAC46 -------->ANAC58 -------->ANAC58                                                                                 <--- --------LBD16                                                                                  <---- ----------------AG                                                                       <---------AHL20(2) ------ARR14(2)                                                                           <---------YAB1 -->YAB1 <---------MYB52(1)                                                         --------->ICU4 -----CCA1(2)                                                                       ----------->GT1 ----->ARR14(2)               <---------ANAC58                                   <------ZmHOX2a(1) -----GLK1(1)             ---------->DOF2 --------->At4g35610               <---------REM1(1) <------ -ARR11(3)  <---------TOE2(3) <---------ANAC58             <---------TOE2(3)<---------ANAC46 --------   atccgcaatcggttaagaaaacattttggaaagcttgcaaaatcagttgtatgaaaattttaagaatgttttagaatggtgtaggaatgtttataatttt  23841000  Previous    Next  AGI:  At5g59010.1    Description:  protein kinase-related. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G41260.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G54030.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G00710.1); similar to TPR-containing protein kinase [Glycine max] (GB:AAX61123.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21539.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15747.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPr Range:  from: 23837594    to: 23840491    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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