Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    --------->At5g28300                 ----------->GT1              --------->MYB52(1)    <-------TEIL ------->GAMYB                                        ------>ZmHOX2a(2)   --------->GLK1(2)                                             <---------WOX13(1)  <---------ARR14(2)                    <---------LBD16        --------->ATHB12  --------->ARR14(2)       <---------TOE2(3)            ----------->HVH21     <---------TOE2(3)   cgaagattcagtagaataacggtaaatctaagatagcatttctctggattgttcaccagtgacagtgattgatcgaatttaagaatattgacagactcaa  23828100                                --------->YAB1                                <---------ICU4                             --------->YAB1                                 --------->At4g35610                            --------->ICU4                              --------->ANAC58                         <------ZmHOX2a(1)                              --------->ANAC46                   ---------->DOF2                                      --------->ANAC58       <-----                ----------------->AG                            <---------At4g35610         <--------                --------------->AGL15                       --------->TOE2(3)  ---------->DOF2 <-----                <---------------AGL15           ---------->DOF2 --------->At4g35610 --------->At4g35610   atgaaaaatgaacaaaaacccaaaagaggaataataatctcatctcgcactaaagagagatacctcagcaaaacaagcagcgaaagcgctgcaaatgaag  23828200                                   --------->ANAC58                                   --------->ANAC46                                   --------->ANAC58                               <-----------------AG        --------->ANAC58        --------->ARR14(2)                                <-----------------AGL1    <---------MYB52(2)          <---------ARR14(2)                    --------->GLK1(2)   --------->ANAC46            --------->GLK1(1)                      --------->ARR14(2)   --------->ANAC58    <---------TOE2(2)                              <---------ARR14(2)   --------->ANAC58    <---------TOE1(2)      <---------YAB1  --------->CCA1(2) <---------ABI4(2) ----TOE1(3)       <------ZmHOX2a(2)--------->LBD16          <---------ARR11(3)--------->ANAC58 -ATHB12--------->ANAC58       <---------GLK1(1)      <----------ID1 <---------GLK1(1)   --------->MYB59 ----TOE2(3)      --------->ARR14(2)------>NtERF2     <------ZmHOX2a(1)        --------->ANAC58   gtttcaaggaacgaaatctcgatccttggtttgaaatccgccattgttatgctataggaacaagataagcgaaatctggagaagcaccgattaggcaaaa  23828300                                                                                               ------                                                                                              <------                                                                        --------->TOE1(3)   ---------                                                              <---------WOX13(1)            <--------                                                            --------->ATHB12                <--------ATHB1                                                           <---------YAB1                   ---------              ----------->GT1                              --------->ICU4                  <---------ATHB12             ----------->GT1                   ----------->HVH21 <---------TOE2(3) <---------GLK1(1)            --------->DAG2             <---------GLK1(2)--------->ICU4  --------->YAB1     <---------YAB1          ---------->DOF2              --------->ARR14(2)--------->YAB1 --------->TOE2(3)  --------->ICU4   tgcaaaaacaaaaaaaggctaaaatttgagaagttgctccagtttctctctaacagcgatgatgattgatgtaatcttaaaatgggtttctcaatgatta  23828400                                                <---------bZIP60(1)                                                <---------ANAC58                                                --------->bZIP60(1)                                                <---------ANAC58                                                <---------ANAC55(2)                                                <---------ANAC46                                           <---------ICU4                                           -------->HAHB4                                           --------->YAB1                                          --------->ICU4                                           <-                       --------->DAG2     <---------ATHB51                                       <--- --->YAB1             ---------->DOF2   --------->YAB1                   <---------GLK1(2)  <-------- ---YAB1        --------->ICU4         <---------AHL20(2)            --------->ZAT14        <-------- >YAB1 ===============================HOX2a_HOX2a  --------->MYB52(1)<---------ZAT14        <-------- -ICU4 <------ZmHOX2a(1)              --------->AHL20(2)         <---------------AtSPL8<----------DOF2 >ATHB12     --------->ICU4    <------ZmHOX2a(2)--------->ANAC55(2)  <-------TEIL   *TSS  <---------ANAC46   tagtttttaggagtagtaatgaagaaaagtgagatcgagatttaataatggcgtaacgaattcagaacaagtacagagtctctctcaatcttttgtgtgt  23828500                                               <-----------HVH21                                               <-----------TGA1                                              --------->ANAC58                                              <---------ANAC55(2)                                              --------->ANAC46                                              --------->ANAC58                                              --------->bZIP60(2)                                              --------->TGA1a                                              --------->ANAC55(1)                <xxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                   --------------->AtSPL8      --------->ZAT6                          --------->ANAC55(2)                  --------->MYB59      <-----------GT1                         <<<<<<<<<<HY5                        <---------------AtSPL8    <-----------GT1                           --------->O2                     ----------->GT1 --------YAB1===========================================bZIP_DOF               <------MYB83 --------GT1 ---------->DOF2                  <---------O2                     <------MYB46(1) -ANAC58    --------->YAB1                   <-----------STF1          <---------ALFIN1 -ANAC46   <---------YAB1            <-----------GT1                 >>>>>>>>>>>>>>>>>LFY -ANAC58   ----------->TBP        <---------REM1(1)                  ------>ZmHOX2a(1) --------->ZAT18   tactattttcactataaaagtttctctctgtttttgttgtaactaaacacgtcattagatagaccctcttcctccactggaaggttatgtacacaaactg  23828600                                                              <-------MYC2                                                              <-------MYC3                                                              ------->MYC2                                            ----------->GT1   ------->MYC3                                            <---------ANAC55(1)                                            <---------ANAC46 =================================bZIP_DOF                                            --------->ANAC55(2)                                           <-----------------------TaNAC69(2)                                          --------->CCA1(2)  <---------ANAC55(2)                                         <---------ARR14(2)  <---------O2                    <-----------GT1<---------ANAC58          --------->O2                 --------->MYB52(2)<---------ANAC58          --------->ANAC55(2)             ----------->GT1  <-----------RAV1(1)            <---------ANAC46        --------->ANAC58      <---------REM1(1)  ---------->DOF2        --------->ANAC46      --------->ALFIN1   ======================bZIP_DOF        --------->ANAC58    <------MYB83 --------->ARR14(2)  --------->TGA1a           --------->ZAT18      --------->ANAC58      <------MYB46(1)<-------TEIL      <---------TGA1a       ---------->DOF2      --------->ANAC58     <---------AtMYB61<---------ANAC55(2)                <----------ID1     ---   tttttcgcacacacaaggttatttactggatggtgttgctagggatacgtataaagactattcacgtgtacatttcaatatacaacaaaggcactagatg  23828700                                                                                      --------->ARR14(2)                                                                                   --------->LBD16                                                                                  <---------LBD16                                                                                 <---------LBD16                                                                              <----------DOF2       -                                   --------->At4g35610                        <---------ARR14(2)    <                                   <---------At4g35610                ----------->HVH21  <-----------GT1                     <----------DOF2       ---------->DOF2            --------->ALFIN1<---------ARR14(2)         ----------->GT1   <------ZmHOX2a(1)                      <-----------RAV1(2) <---------GLK1(2) ---->TEIL         <---------At4g35610   --------->MYB46(3)    --------->ANAC46<-----------HVH21  <--   aaccagagaaatggtgaatggagcttataggagttttagctgaaccaaagtgagtgattctataaacaccaggtgatgcggtttcagggattctccattc  23828800                   <----------CDC5                  <---------At4g35610                               <---------ICU4               <---------ANAC58                                     --------->YAB1               <---------ANAC46                                  <---------ICU4               <---------ANAC58                       <------NtERF2<---------YAB1            ---------->CDC5                          --------->ANAC58  --------->YAB1         <---------ZAT14                             --------->ANAC58 <---------YAB1         --------->ZAT14    <-----------GT1       --------->LBD16--------->YAB1 -------->MYB52(2)<---------ZAT2                <---------LBD16 <---------YAB1 ---------MYB46(3)--------->ZAT2             ---------->DOF2    --------->ICU4 -------MYB52(1)  --------->At4g35610<---------WRKY18(1) ---------->DOF2               --------->O2   gatagttgctgtgctctgcgtgctgagtttaaacggtcttgaccacttaaaccggaggcaaaagtcatcatcatcataaacaggtacccatgtctctctt  23828900                                                            <---------ZAT2                                                            --------->ZAT2                          -                                    <-----------TGA1        <---------At4g35610                     -                                    <-----------HVH21       --------->At4g35610                     -                               <---------ANAC58      <---------LBD16                                <                          --------->HSFC1(2)--------->ARR14(2)                                     <-                          --------->HSFB2a(1) ------>ZmHOX2a(2)                                    <-                --------->MYB46(3) --------->ANAC55(2)   <--------P                                <-                ---------->DOF2<---------ANAC58     <---------LBD16        ------->TEIL            <-        --------->O2      <---------HSFC1(2)--------->ARR11(3)     --------->LBD16        --------->ZAT2       ------>NtERF2      <---------HSFB2a(1)<------ZmHOX2a(2)   <---------LBD16          --------->At4g35610      <---------ALFIN1--------->ANAC58      <---------ARR14(2)----------->HVH21           <---------At4g35610     --------->MYB46(3) ---------->DOF2     <---------ARR11(3)--------->WRKY12            <---------ZAT2   --------->ANAC46   --------->ANAC58  <---------At4g35610--------->MYB52(2)         <-----------HVH21   ccttcgagccacctctcaacaagcgcgaaagttccttccgtcatcagatcgtttctcgggttagctgaccggaattgaaccctcactatgtcagctccct  23829000  Previous    Next  AGI:  At5g58970.1    Description:  ATUCP2 (UNCOUPLING PROTEIN 2); oxidative phosphorylation uncoupler. similar to ATPUMP1, binding / oxidative phosphorylation uncoupler [Arabidopsis thaliana] (TAIR:AT3G54110.1); similar to uncoupling protein a [Dracunculus vulgaris] (GB:BAD51464.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial brown fat uncoupling protein; (InterPro:IPR002030); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067) Range:  from: 23825687    to: 23828484    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g58980.1    Description:  ceramidase family protein. similar to ceramidase family protein [Arabidopsis thaliana] (TAIR:AT1G07380.1); similar to ceramidase family protein [Arabidopsis thaliana] (TAIR:AT2G38010.2); similar to ceramidase family protein [Arabidopsis thaliana] (TAIR:AT2G38010.1); similar to neutral ceramidase [Triticum aestivum] (GB:ABX76295.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15765.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21530.1); contains InterPro domain Neutral/alkaline nonlysosomal ceramidase (InterPro:IPR006823) Range:  from: 23828675    to: 23831621    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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