Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   ------->GLK1(2) ------->ARR11(3) ----------ARR10 --------ARR11(3)                                                   ---------->DOF2 -TEIL                                                            <---------YAB1      <---------TOE1(2) ->CCA1(2)                             --------->MYB46(3)       --------->YAB1       ------>ZmHOX2a(1) >ARR14(2)               <---------CCA1(2)                     <---------ATHB12     --------->TOE1(2) -ARR14(2)             <---------ALFIN1<---------ATHB12 <----------ID1              --------->TOE2(2)   aaatcttttcaaatccatcgaagccccatttctcaccttcaaccattaatccacaaaaactacaaatcataaaagaagaaaactttcctacgaatactac  23820500                                                   --------->AHL20(2)                  --------->HSFB2a(1)         ------>ZmHOX2a(1)                  <---------HSFB2a(1)     <---------ARR14(2)           <-----------GT1                --------->ARR11(3)                     --------->YAB1       --------->HSFC1(2)                 --------->GLK1(2)                   ----------->RAV1(1)       <---------HSFC1(2)            --------->LBD16 <---------ANAC55(2)   --------->ANAC46       <---------HSFB2a(1)         <---------LBD16 <-----------GT1         --------->ANAC58       --------->HSFB2a(1)        --------->MYB52(1) --------->ANAC55(2)   --------->ANAC58   --------->ANAC58        --------->AtMYB61  --------->LBD16             --------->WOX13(1)      ---   --------->ANAC58     --------->ANAC46  --------->ARR14(2)     ------>ZmHOX2a(1)                <--   taagctcgaaatttctccaaacgttcccaccaaaatcaccggaaaatcctgaattacatacctcttcctacaaaatcaagcaacaatactcagaaaatcg  23820600                                          <---------AGP1                                       <------ZmHOX2a(2)                                       ==============================HOX2a_HOX2a                                  ---------->DOF2                              <-------GAMYB ------>ZmHOX2a(2)                             ----------->GT1=========================HOX2a_HOX2a              ------- ------>ARR14(2)       --------->YAB1 <---------ARR11(3)      <------ZmHOX2a(1)         --------->TOE2(3) -------ARR14(2)    --------->TOE2(3) --------->ARR11(3)    <---------TOE2(3)          ----------->RAV1(2)   aatccatagaagctattgaaaacgataatgagggttaaaagatcgatctgaatcaacaaatttaggaaactagttttcgatatttgtttacctgaatcac  23820700                                                                               --------->DEAR3(1)                                                                             --------->LBD16                                                                             <---------ATERF1(1)                                                                            --------->TOE1(2)                                                                           <---------LBD16                                                                           ------>ZmHOX2a(2)                                                                           ==========================                                                                          ===========================                                                                          <------ZmHOX2a(2)                                                                          --------->ARR14(1)                                                                          --------->CCA1(2)                                                                         --------->ARR11(1)                                                                         --------->ARR14(2)                                                                         <---------ARR14(3)                                                                         --------->ARR14(3)                                                                         <---------ARR14(2)                                                                         --------->ARR11(3)                             ---------->DOF2                             <---------ARR11(3)                        ----------->GT1             --------->O2        <---------HSFB2a(1)                      <---------ANAC46         --------->ANAC58         <---------GLK1(1)  --------->LBD16                    <---------ANAC46           --------->ANAC58        ----------->ARR10 <---------LBD16                   <------NtERF2              --------->GLK1(1)  <---------ATHB12    ---------->DOF2                  <-----------HVH21          ---------->DOF2   --------->GLK1(1)  <---------ANAC46                 <---------DEAR3(1)         <------ZmHOX2a(1)  <---------GLK1(1)------>NtERF2  <----- -->YAB1         --------->DEAR3(1)         =====================================HOX2a_HOX2a<------NtERF2   aacaaaaaactatgaagcgtcgtcgtgtgttaaaaggaagagaagaggaaagccaagtgaatcggaaatcaagaagatccggcgacttgaagccggagga  23820800                                                            <----------DOF2                                                            <---------DAG2                                                         --------->ARR11(3)         --------->ANAC58                                                         <---------ARR11(3)         --------->ANAC58           <------ZmHOX2a(1)                   --------->ARR14(2)     ------->TEIL  --------->ANAC46 =HOX2a_HOX2a                  --------->TOE1(3)     ---------->DOF2  --------->ARR14(2)           *TSS =HOX2a_HOX2a           <---------At4g35610    <---------GLK1(2)      --------->GLK1(2)<---------DAG2 -ZmHOX2a(1)            --------->At4g35610    <---------ARR14(2)     <---------ARR14(2)<----------DOF2   agatggaatcgaaggagaaatttgagagctaaaccataagacgtttttggattctcaaagacctttttgacgaatccagacctcttacgcctttttagat  23820900                                                      --------->HSFB2a(2)                                             --------->AHL20(2)                                             <---------AHL20(2)                                             <---------AHL20(1)                                            --------->AHL20(2)               ---------->DOF2                                            <---------AHL20(2)            --------->TOE2(3)                                         --------->AHL20(2)               --------->TOE1(3)           <----------DOF2              --------->AHL20(2)               ----------->GT1         ---------->ID1                 <---------AHL20(2) --------->ICU4<---------ANAC55(2)        <-----------GT1           ----------->GT1  <----------DOF2      <-------TEIL  <---------AHL20(2)       --------->AHL20(2)--------->AHL20(1) ----------->GT1        <---------ANAC46   ggattttttttttctttttttttcacagataaaatgtggaaaataaataaattcttttggaatatttagaaaaatacgttaaaacgacagcgtattaatc  23821000                                                               <----------DOF2                                                               <---------DAG2                                                              <---------------AGL15                                                              --------------->AGL15                                                             ----------------->AGL1                                      ---------->DOF2        ----------------->AGL3                           <---------AHL20(2)          <---------TOE2(3)                           <---------ICU4        <---------AHL20(2)                 ---------->DOF2                           -------->HAHB4        --------->AHL20(2)          <---------AHL20(2)                          <---------ATHB12      <---------AHL20(2)           --------->AHL20(1)                --------->GLK1(1)   ----------->HVH21  --------->MYB59       <---------AHL20(1)       <---------GLK1(2)  <---------ATHB51      --------->AHL20(2)           --------->AHL20(2)      <---------At4g35610 --------->ICU4        <---------AHL20(1)          --------->AHL20(2)  <-----------HVH21       <---------YAB1        --------->AHL20(1)          <---------AHL20(2)   tgtctgtcagcatctctgatatgctctaattattctgtctgaaagagaaatttaatttaggttcccttttttagtcaaataaattctaaaggccatagac  23821100                                                          <---------WOX13(1)                                                         <---------ANAC46                                                         <---------ANAC58                                                      <---------WOX13(1)                                                    <---------ICU4                                                    --------->ATHB12                                           --------->ANAC46                                       ---              <---------AHL20(2)       --------->CCA1(2) <---------ANAC58             <------NtERF2           --------->YAB1            --------->YAB1<---------YAB1            ---------->DOF2      ---        --------->YAB1              <---------YAB1 --------->ICU4          --------->ANAC58  --------       --------->AHL20(2)       <----------DOF2  <---------ICU4            --------->ANAC58  -------- ---------->ID1              <-----------GT1     --------->YAB1         --------->ARR14(2)  --------- ------>NtERF2--------->AHL20(2)<---------DAG2  --------->ICU4          <---------ARR14(2) --------->TOE2(3)   ttcggcccattaataataaaactggcccaaattactttatgatataggccatgatgattgcttgatagtaaccagaaacgaaagaggcctcaacgttgac  23821200                                                                                                 <--- ------>ANAC58                                                                         <-----------GT1 ------>ANAC58 --------->YAB1                                                      <----------DOF2 ->WRKY12  --------->TOE1(2)                                                       --------->TOE2(3) ->WRKY38(1)------>ZmHOX2a(1)            ---------->DOF2        <-----------GT1 --------->ARR11(3) >DOF5.7(2)--------->TOE2(2)   <---------MYB52(1)       --------->ANAC46        <---------ARR11(3)   aagcttcactaatcctatgagaaaaactcttctgttttttttttaaagaacataattcacacaaattaaccattctaaacaagaactttaaactacataa  23821300        <---------CCA1(2)                                              <-------TEIL      <---------CCA1(2)                         <-----------GT1    <---------ICU4                  --      ------>ZmHOX2a(1)                      <---------ICU4<----------DOF2                 <--------- --------GT1          --------->ATHB12       ----------->GT1      --------->AHL20(2)    <-----------GT1   aaccattcctatctcttattctcaacattggggaagtgcttaaacaattgttacaaaacaacttttgaataaatacatgctagttttttttttctttgtc  23821400  Previous    Next  AGI:  At5g58950.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G46930.1); similar to flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] (GB:ABK06446.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 23818154    to: 23820899    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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