Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->O2                                                                                           <---------O2                                                                                           ----------                                                                                        --------->DEAR3(1)                                                                                       <------NtERF2                                                                                       --------->RAP2.3(1)                                                                                      <---------RAP2.3(1)                                                                                      ------>NtERF2                                                                                     <---------DEAR3(1)                                                                                    --------->ATERF1(1)                                                                                  <---------O2                                                                          <---------ANAC46 <---------DEAR3(1)                                                                         <---------LBD16<---------DEAR3(1)                         <------NtERF2                                   <------NtERF2<---------ATERF1(1)                     <---------TGA1a                                    <---------ORA47(2)<------NtERF2                     --------->O2                                       <---------RAP2.3(1)--------->DEAR3(1)                     <---------O2                                      <---------RAP2.3(3)--------->ATERF1(1)                     <---------ZAT2                                    <---------DEAR3(1)------>NtERF2                     --------->At4g35610   <------MYB46(1)           --------->MYB52(1)--------->ATERF1(1)                     --------->ZAT2        <------MYB83         ----------->HVH21 --------->bZIP60(1)                     <---------At4g35610  <---------MYB46(3)   --------->At5g28300<---------bZIP60(1)                   <-----------RAV1(2)   <---------ANAC46    <---------ANAC46     ----------->HVH21             --------->ANAC46         --------->ALFIN1       <---------DEAR3(1)----------->TGA1            <---------LBD16           <---------AtMYB61    --------->MYB52(1)  ----------->HVH21 ----           <---------DOF5.7(2)   >>>>>>>>>>>>>>>>>LFY     ----------->HVH21 <------NtERF2<---------ATERF1(1)          <-------TEIL --------->ALFIN1<---------MYB46(3) ----------->TGA1<---------DEAR3(1)   <-----         --------->DOF5.7(2)     <<<<<<<<<<<<<<<<<LFY   <------ZmHOX2a(1)--------->ATERF1(1)------>NtERF2   ggtagagagacgttcacggagacaggtggcacagaaaccagtggtgggtttggaagaaggatgacggtgacagacggcggagtgacgacggcgacgacgc  23813300                    --------->ZAT18            <-----------HVH21            <---------PCF2           <------MYB83           <------MYB46(1)          <---------MYB46(3)       <------MYB83 ----------->HVH21                                                               -       <---------ANAC58                                                                            <-       <---------ANAC58                 --------->ZAT14                                           <--       <---------ANAC46        <---------MYB46(3)                                                 ---       <------MYB46(1)         --------->MYB55(2)                                                 ---      --------->MYB46(2)       <------MYB83                                                       <--      --------->MYB55(2)       <------MYB46(1)                                                    ---      --------->MYB111(1)     --------->ALFIN1                                     --------->WOX13(1)      --------->MYB111(2)  --------->ALFIN1                                      <---------MYB52(1)--      <---------MYB46(3)   <---------DEAR3(1)                               --------->ARR14(2)    <--      <---------AtMYB61<-----------RAV1(2)<---------ANAC46                  --------->GLK1(2)     <-- ->HVH21  --------->MYB55(2)  <---------AtMYB61       >>>>>>>>>TBF1         <---------ARR14(2)   <--- ------->HVH21    <---------At4g35610   <---------ZAT14                    <---------GLK1(2)  <------ ----At4g35610    --------->At4g35610   --------->ZAT18          <---------ZAT14<-----------HVH21<---   tgatgggtttggtgggtcatagctcacagggggtggtttgagttcagtgaatggaagaagaagagagtgaagttgaagaatctgtcagtcacattttcag  23813400   --------->HSFB2a(2)   <---------HSFB2a(2) ----->ZmHOX2a(2) -----ZmHOX2a(2) -------ARR11(3) ------>ARR14(3) ------>ARR14(2)                                <---------ZAT18 -------AGP1                                    <---------ZAT14 ------>ARR11(3)                              --------->ANAC46 ------->GLK1(1)                            --------->ZAT6 -------ARR14(3)                    <-------GAMYB                    ------>ZmHOX2a(1) -------ARR14(2)                   <---------ANAC58                 --------->TOE2(3) ---ZmHOX2a(1)                     <---------ANAC46       <----------DOF2  <---------DAG2 ---LBD16>>>>>>>>>TBF1             <---------ANAC58   -------->P    --------->TOE1(3)      <---------YAB1 ------GLK1(2)   ---------->DOF2--------->ALFIN1--------->ZAT14 <----------DOF2         --------->AHL20(2)   gatctcgagaagaagaagagaaagagagtcaagagtggcgttgtcaacactacactaaccctttccctttccttaaaccttttctctcgttttattattt  23813500                     --------->AHL20(2)                     <---------AHL20(2)                 <---------YAB1                <---------AHL20(2)                <---------AHL20(1)                --------->AHL20(1)               --------->YAB1          <---------ANAC58          <---------ANAC58          <---------YAB1          <---------ANAC46--------------->AtSPL3          <---------ANAC55(2)   <----------DOF2                                                     <          --------->ANAC55(2) ------->TEIL                                      ----------->GT1     -    --------->AHL20(2)    --------------->AtSPL8                      --------->YAB1          <------    <---------AHL20(2)  <-----------GT1      <---------TOE2(3)      <---------TOE2(3)   <---------TOE2(3)   cttcattttaatgcgtattatatttatttctgtactttcttatagttaatgaaaaatacagaaatgagttaatgaaaatagagagaaaataatgttatgt  23813600                                                                                        <------------                                                                                       --------------                                                                                       <-------------                                                                                       --------------                                                                                       --------------                                        ==================================bZIP_DOF     *TSS                                        --------->O2                       --------->ZAT14                                        <---------ANAC55(2)                <---------ZAT14                                        <---------TGA1a                    --------->ZAT18 <---------ICU4              ====================================bZIP_DOF     ---------->DOF2   <---------ALFIN1              ---------->DOF2           <---------O2         --------->YAB1<---------ZAT18<---------ATHB51 ---------------AtSPL8              <-----------HVH21<------NtERF2       --------------->AtSPL8 -------------->AtSPL8   ----------->GT1--------->TGA1a    --------->GLK1(2)   ----------->RAV1(1) ---YAB1    <---------YAB1   <---------YAB1     --------->ALFIN1         <---------------AtSPL8    --   tttttgtacaaaatatcaaagaaaaaatggtataattgtgtcacatgagagtggcagagagaatcaaaaggaagaagtgtacaacacatcccataatggg  23813700                                                                                                    -                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                   --                                                            <---------AHL20(2)                     --                                                       <---------YAB1                              <-                                                      <---------AHL20(2)                          ---                                                      --------->AHL20(2)                          <--                                                 --------->ICU4                                   <-- ---AGL15                                        <---------AHL20(1)                               --- --->AGL1                                        <---------ARR11(3)        ========================== ----AGL2              ------->TEIL              --------->ARR11(3)        ---------->DOF2        === --->AG <---------MYB52(1)                       --------->AHL20(1)     <---------MYB59           --- --->AGL2  <-----------TBP  ---------->DOF2 <---------ZAT6 <---------AHL20(2)           ----------->GT1 --------->HVH21  <------ZmHOX2a(1)       ----------->GT1  --------->AHL20(2)  <------------CBF   <--   tctgacctctggtatttgtaggacgaacataaaagactcttaattagtgaaaatattaaaattaaatggatagacctaaaagattgaaaatggtgaaaac  23813800       <---------ALFIN1   <---------ZAT18   --------->ZAT18 -------->ALFIN1 ----->MYC2 ------MYC4 ------MYC3 ----->MYC3 ----->MYC4                    <------MYB46(1)                   <---------GLK1(1) ------MYC2                    ----------->GT1             <----------DOF2 ------>O2                     <------MYB83         <---------MYB52(1) -------O2                  <---------ANAC58       <-----------TGA1 -------TGA1a               <---------ANAC46       --------->LBD16 ------>ANAC55(2)           <---------ANAC58       <-----------HVH21          <---------HSFB2a(2) =======bZIP_DOF           <---------MYB46(3)<---------At4g35610 --------->GLK1(1) ============================bZIP_DOF     <---------At4g35610   <---------GLK1(2) ------>TGA1a              --------->MYB55(2)--------->At4g35610--------->ARR14(2) -------ANAC55(2) <----------DOF2   --------->ICU4--------->ANAC55(2)        ----------->GT1        <   acgtgtgccccatttgttttcttttaccttgggtggtaatatttggctgcttccgtcatttctttggattcccttcgaatcgagaaatagcttcaatgtc  23813900                               --------->ARR11(3)             <-----------GT1                      <------MYB83                   <---------ANAC58                      <------MYB46(1)                ----------->GT1                 <---------AHL20(2)                  <---------ANAC58                     <---------REM1(1)               <---------------AGL15                 <---------ANAC46                     -----------               <----------DOF2 <---------ARR11(3)  <---------ZAT14                       <---------ARR11(3)              <-----------------AGL3               --------->ZAT14               <---------ZAT18              <-----------------AGL2       <---------YAB1  <---------ICU4        --------->ZAT18       <---------AHL20(2)      --------->AHL20(1)  --------->ZAT18            <---------ANAC46 ----------DOF2--------------->AGL15   <---------GLK1(1)  --------->ICU4<--------P ----------->RAV1(1)   aacttttatttattcttctttatttggtttggatatattagagttctgattagtggagtgatttttaccaagaggttgtttagtgcaacaagatgtaaca  23814000                                                                                     --------->At4g35610                                                                                     <---------ANAC46                                                                                     ----------->RAV1(2)                <----------DOF2                                                      <---------ANAC55(2)                <---------DAG2                                                     <-----------GT1                <---------------AGL15                                       --------->ATHB12                --------------->AGL15                                    --------->REM1(1)           <----------DOF2                                               <---------bZIP60(1)        --------->ANAC58     ----------->RAV1(1)                         <---------TGA2(1)<---------TGA1a        --------->ANAC58     ------->GAMYB                  <---------MYB46(3)  <---------MYB46(3)        --------->ANAC46    --------->ANAC58            <------MYB46(1)  --------->bZIP60(1)       <- >GT1 <---------ALFIN1      --------->ANAC58            <------MYB83   <-----------GT1 ----------->HVH21   tttgaacaacacgctttactttttgatgcaacgacataaactagtttttgaattaagtgggtttgttcaaatgttacatcatttgttacctgaagtgtgt  23814100                                                                                              -------                                                                   --------->ARR11(3)         -------                          ----------->GT1                    <---------YAB1<---------ICU4  --------->YAB1    --------->YAB1        <---------ANAC46        <<<<<<<<<<<<<<<<<LFY  <-----------GT1--------->TOE2(3) --------->WOX13(1)   <---------YAB1            <----------DOF2    <---------ARR11(3)  --------->TOE1(3) --------YAB1   <---------AHL20(2)        --------->MYB46(3)--------->AHL20(2)         <---------MYB59   tatcattcaaaacaatatttcattgttatcgtgaaaacagagaaaccactctttacaatggttttaatagattttaactatgacatttacctaaaataaa  23814200  Previous    Next  AGI:  At5g58930.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G46990.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79178.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21512.1); contains InterPro domain Protein of unknown function DUF740 (InterPro:IPR008004) Range:  from: 23811541    to: 23813687    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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