Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        ------->GAMYB                                   <-----------GT1                              <----------DOF2                            <---------RVE1(1)                            <------ZmHOX2a(2)                           <---------AGP1                           --------->AGP1                           <---------ARR11(3)                       ==========================HOX2a_HOX2a                           <---------ARR14(3)                       <------ZmHOX2a(2)                           --------->ARR14(3)                      --------->ARR11(3)    <---------KAN4(2)               <---------AtMYB61  <-----------GT1             --------->ARR14(2)       <------ZmHOX2a(1) ------>ARR14(2)           --------->ARR14(2)              --------->YAB1    --------->ANAC58 -------ARR14(2)           <---------ARR14(2)         --------->AHL20(2)     --------->ANAC58 -MYC3       <---------ANAC46------>ZmHOX2a(2)        <---------AHL20(2)   ---------->DOF2   ------->TEIL >MYC3    --------->ALFIN1 --------->ARR11(3)  ----------->GT1<---------ARR14(2) ---------->DOF2   gaaactcttgaggtgttgtggttttccaagatctttttaacgctcaattcagtaaataaaatcatatacgatctagcaaaagcaaaagaggaatgaactt  23759300                       --------->AHL20(2)                                                 <----------DOF2                       <---------AHL20(2)                                              <---------AHL20(1)             <----------DOF2                                               <---------ANAC46   --------->LBD16     --------->AHL20(1)                           <---------ANAC58   --------->ARR11(3)  --------->ANAC46     <---------AHL20(1)                           <---------ANAC58   <---------ARR11(3)  --------->ANAC58    --------->AHL20(2)                        <----------DOF2       --------->RVE1(1)  --------->ANAC58  --------->TOE2(3)        <-----------GT1   <---------DAG2         --------->CCA1(1) <---------LBD16   <---------ICU4         ----------->GT1  <---------MYB52(1)   ----------->GT1   aaacccgcaaaactcctttaaacattaaattgtttcaaacggttttgtaacacatttctccattaccttttcttgttgtgttttgttaatatcttttcaa  23759400                                                                         --------->ZAT14                                                  ---------->DOF2        <---------ZAT14                                              --------->ANAC58----------->GT1                  ------              ----------->GT1        --------->ANAC58         <---------ANAC58               <-------           <----------DOF2           --------->ANAC46        <------NtERF2                   <-------  --------->ZAT14                    --------->ANAC58      <---------DEAR3(1)                <-------  <---------ZAT14           <-------TEIL      --------->ANAC58<---------ANAC46               <------- <---------ANAC46          --------->CCA1(2)  --------->ANAC46<---------ANAC58       <-----------GT1   attgtgtagtagtcttttgtaaaaaatagatacaaaatcacacaatacaagtcaaagtgagacggcgtgaaatactacagtactattttacaataacgtg  23759500                                                                                                    -                                                                                                   <-       <---------ICU4                                                                             <--       --------->YAB1          ------>ZmHOX2a(1)                                                 ----       -------->ATHB1          <----------DOF2                                                -------      --------->ICU4          --------->TOE2(3)                                              <-------      <---------AHL20(2)      <---------------AGL15                                          --------      <---------ATHB51        --------------->AGL15          --------->MYB59                 <-------      --------->AHL20(2)     ----------------->AGL2        <--------P                        <------- <------NtERF2               ======================================================================== --->ALFIN1                  <-----------------AGL3       <-----------HVH21                 --------- --ANAC58                    ----------------->AGL3  <-----------------------TaNAC69(2)     --------- --ANAC58                  --------->ARR11(3)     --------->DAG2                            <-------- --ANAC46<---------YAB1    <---------ARR11(3)    ---------->DOF2              <------------CBF<------ --bZIP60(2)         ----------->GT1           <---------RAP2.6(3)  ---------->DOF2      ----------->GT1   gtcgccaaattattatttccaagtggaaaaatcctttaatagaaactgccgaaaagccctggttaggccaaaaaccccagtattggaacaagggtatatc  23759600       --------->ANAC58       --------->ANAC58       --------->ANAC46    --------->ZAT14    <---------ZAT18                             <---------GLK1(2) <------------CBF                            --------->HSFC1(1) -------->ATHB12                             --------->HSFB2a(2) --------MYB52(1)                            <---------HSFB2a(2) ---------HVH21                         --------->At4g35610 ----->ANAC46                           <---------HSFC1(2) -->ARR14(2)                            --------->HSFC1(2) ---TaMYB80                  --------------->AGL15 ->GLK1(1)                   <---------------AGL15 --CCA1(2)              <----------DOF2 <---------HSFB2a(1) --GLK1(1)         --------->HSFB2a(2)  <---------At4g35610 ============================================MADS_MADS                                            <-- ->TaMYB80        <---------ANAC58      <---------ZAT2         ------->TEIL          ----------->GT1 -->ARR10         <---------ANAC58      --------->ZAT2--------->MYB52(1)    ----------->GT1       --- -KAN4(2)         <---------LBD16  --------->DAG2  --------->YAB1           *TSS    <---------HSFB2a(2) ---ARR14(2)     <---------LBD16  ---------->DOF2--------->GLK1(2)   ---------->DOF2--------->HSFB2a(2)   cgtcattgcacgcataaatttcgggacttttcttgaaaaagcagcttcgagaatcgtaactgatgaatcgctaaagagaggtttatcgagaaaaatccaa  23759700                                                                                --------->TOE2(3)                                                                    <---------ANAC58                                                                    <---------ANAC58                                         --------->TOE2(3)      <---------ARR14(2)                                     --------->ETT(2)    <---------YAB1 ---------->DOF2                                     <---------ETT(2) <---------YAB1<---------ANAC46        --------- -------ARR11(3)                ------>ZmHOX2a(1)  --------->ICU4  <---------MYB46(3)     ------>ZmHOX2a(1) ------>ARR11(3)        <---------At4g35610  <---------TOE2(3)  --------->ARR14(2)       ------------   gatttactaaaaaaccactatctctctgctcttcctctgtctacattaatgtaattttgatcatcggattgggtgaaagaaacatcaaactcctaaaaga  23759800                                                                             <---------ICU4                                                                            <---------YAB1                                                                          <---------ICU4                                                                          --------->YAB1                                                                         <---------YAB1        <-----                                                                       --------->YAB1      <---------ANAC58       <---------TOE1(3)                        <---------DAG2         <---------ICU4      <---------ANAC58      ---------->DOF2                           <----------DOF2      ------->TEIL       <----------DOF2   <----------DOF2    --------->YAB1        <-----------GT1     <---------ANAC58       <---------ANAC58 ->DOF2<---------TOE2(3)      ---------->DOF2<-----------GT1    <---------ANAC58       <---------ANAC58 --->AGL15        <---------AHL20(2)----------->GT1             <---------ANAC46   <----------DOF2   gaagcctttaaagtttttttttaatcaaaaacaaaaggaagaaaattttcctttttgttttagatggcatgaatcatcatcatcgctttgctttcttgat  23759900                                                    ------>NtERF2                                                 <---------At4g35610                                                 --------->At4g35610                                    <---------AHL20(2)                                   --------->AHL20(2)                        --------->ARR14(2)                                   <---------AHL20(2)                        <---------GLK1(2)                                   <---------AHL20(1)                        <---------ARR14(2)          <---------MYB46(3)       --------->AHL20(1)                     <---------TOE2(3)      <---------ANAC46       --------->LBD16  ----------->RAV1(2)    <----------DOF2          -------      <---------ANAC58      <---------HSFB2a(2)  <---------ZAT2    <---------YAB1        <---------ARR11(3)      <---------ANAC58      --------->HSFB2a(2)  --------->ZAT2   <---------ARR11(3)     --------->ARR11(3) ----GLK1(2)               <---------LBD16    <---------At4g35610 --------->ARR11(3) ---------->DOF2<   tctctatttcgtttgatgggatttgtttttctgggaatttattcattcacctgctgccatggctaaattatctttcaaggattctcttaaagctcttgaa  23760000           --------->ANAC58           --------->ANAC46           --------->ANAC58        <---------REM1(2) <---------MYB52(1)                           <---------YAB1 <---------ARR14(2)                         <----------DOF2       <---------YAB1 --------->ARR14(2)    --------->At5g28300  <---------DAG2      <----------DOF2 --->DOF2<---------ALFIN1       ------>ZmHOX2a(1)       <---------AHL20(2) ---------RAP2.6(3)   ----------->GT1    <---------ALFIN1 <-----------GT1---------->DOF2   gccgatattcaacacgctaatacactgtaaattcctccattctccacttttattgaaatttatcgacttttattgtaaagtctcgatttttagtttatct  23760100                                                                 <---------ANAC46                                                                 <---------AtLEC2                                                                 <---------ANAC58                                                           <------MYB83                                    <---------ANAC58       <------MYB46(1)                                    <---------ANAC58     <---------WOX13(1)            --------->HSFB2a(1)                                    <---------ANAC46   --------->ATHB12                --------->HSFC1(2)                               <-----------RAV1(1)    <---------YAB1                   <---------HSFC1(2)                        <---------YAB1         <-----------GT1   <---------ANAC58      <---------HSFB2a(1)                     <---------AHL20(2)      <------------------------ANAC81          <---------TOE2(3)          --------->MYB52(2)   <---------MYB46(3)   <----------DOF2                   <---------TOE1(3)   cagcgttcaagttagtttttttttttattctagttgttgcttaattttgtttccctttgattggtttgcatgtaagagaattgaattgaaggttccttct  23760200  Previous    Next  AGI:  At5g58787.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G47160.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61894.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21466.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 23759676    to: 23761830    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version