Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              <---------YAB1                                           <---------AHL20(2)                                           --------->AHL20(2)                                           --------->AHL20(1)                                           <---------AHL20(1)--------->At5g28300                       ----------->GT1    --------->YAB1    ----------->GT1                         <                      --------->DAG2     <---------YAB1   <---------ZAT14                      ------                     ---------->DOF2  <------NtERF2  --------->MYB46(3)                      --------           --------->YAB1            ----------->RAV1(1)  --------->ZAT14              --------->YAB1   aagtgaagaatactaataaacaataaagtgaatttcaggcaccattataatgggaaccaatacagtgaatacttctaatatgttcgaaatcaaaatcaaa  23750500                                                --------->ANAC58                                           --------->ANAC46                              <---------ANAC58     --------->ANAC55(2)                   --------->ANAC58                              ----------->GT1     <---------ANAC55(2)                   --------->ANAC58               <---------TOE2(3)    <----- ---------ICU4                         --------->YAB1                     <---------TOE1(3)<---------MYB52(1) ---->DOF2    --------->ANAC46        <---------ATHB12              --------->DAG2       <---------ANAC58 ->YAB1<---------ICU4        --------->ARR11(3) --------->ANAC58   ---------->DOF2       <---------ZAT6   agtcattacttattccacataagcctactcagaacttgaaatcataagccaagtaagaaaactcattagaaaagttagggtttttagaatagcgttactt  23750600                             <---------ANAC58                             <---------ANAC58                                               <--------                       --------->At5g28300  ---------->ID1                                --------->REM1(1)                   --------->MYB52(1)   <----------DOF2                             --------->MYB46(3)                --------->TOE2(3)<---------ANAC58                                   <------------MYB.PH3(1)                --------->TOE1(3)<---------ANAC58                                 <-----------GT1       --------->YAB1 ------->GAMYB     <---------MYB52(1)                       <-----------GT1  ---       --------->TOE2(3)    <---------MYB46(3)<----------DOF2           --------->ANAC46<----------DOF2 -----DOF2     --------->At4g35610<----------DOF2                   <-----------GT1<---------At5g28300   tgcaaactttcttaataagcttaacggtaatgggtgctttccctttggctttattcttctccaattcaattttccctccatttttaaccgcttcatcttc  23750700                        <---------ARR11(3)                        <-----------GT1                        --------->ARR11(3)          <---------HSFB2a(2)                                             --------->ZAT6          --------->HSFB2a(2)                                           ------->TEIL          --------->LBD16                     --------->At4g35610      <---------CCA1(2)        <----    ------>NtERF2----------->GT1              <---------At4g35610 <---------ARR14(2)        <--------   ----------->HVH21   --------->YAB1      <<<<<<<<<TBF1          --------->GLK1(2)      <---------GLK1(1) ------>ZmHOX2a(1)    --------->ICU4    <<<<<<<<<TBF1        <---------LBD16       ----------->HVH21 -At4g35610  ---------->DOF2         <<<<<<<<<TBF1    ------->TEIL--------->ARR14(2)  <---------YAB1 --->ZmHOX2a(1) ----------->GT1------>ZmHOX2a(1)----------->HVH21<---------GLK1(2) ----------->TGA1   ctcctccgactccgagaaagggtaattatcttcctcttcttcttcttcttctgacgaacttaactcggaatctgtatctctagcgatgacgatttctggg  23750800                                                    ----------->RAV1(1)                                                   --------->ANAC58                                                   --------->ANAC46                                                   ----------->HVH21                                                   <---------ETT(1)                                                   --------->ANAC58                                                  --------->DEAR3(2)                                              --------->ANAC46                                              --------->ANAC58                                              --------->ANAC58                                        <---------ARR11(3)            --------->ANAC58 <----------DOF2    --------->WRKY12    --------->ARR11(3)       <---------------AtSPL3 <---------DAG2 ------>ZmHOX2a(1)      --------->RVE1(1)         <---------------AtSPL8 -----PCF2 <---------At4g35610    --------->At5g28300   ---------->DOF2                    <--------- -LBD16 <---------At4g35610      ----------->GT1  --------->MYB46(3)  --------->ANAC58 ---------->ID1   tccctttttcttctgctcctcgttgaactcattttcggtaaaaatctcacgacccgacaaaaggaagagagtacgaatcaaacagttttgtttctttttg  23750900                                           --------->WRKY12                                           ----------->HVH21                                     <------MYB83                                     <------MYB46(1)             --------->LBD16                                    --------->MYB111(1) <---------AHL20(2)                                    <---------AtMYB61   <---------ICU4                ------>NtERF2       --------->MYB46(2)  --------->AHL20(2)               <---------ZAT18      --------->MYB59     --------->ATHB51             <------NtERF2        <---------MYB52(1)   --------->ICU4             <---------At4g35610  <--------P<---------WRKY18(1)  ----------->GT1             --------->At4g35610 <-----------HVH21  <---------AHL20(2)       <---------DAG2       <--         --------->ANAC46        <-------GAMYB  ----------->GT1<---------LBD16                   <---      ----------->HVH21   ---------->DOF2  --------->WRKY38(1)<---------ANAC46             <---------TOE2(3) -DOF2--------->ANAC46  *TSS    <---------DEAR3(2)  --------->AHL20(2)       <----------DOF2    <----   ggtttgatacgacgcagcggacacaaactaaagccggttaggtcgatgaccggtttaattatttacgcggataaaaacacttttactcccatttagattt  23751000                  ======================HOX2a_HOX2a                  ------>ZmHOX2a(2)                                              <------NtERF2                 =======================HOX2a_HOX2a                             --------->LBD16    <-                 <------ZmHOX2a(2)                                             <---------ANAC58    <-                <---------ARR11(3)                                             <---------ANAC46    <-                --------->ARR11(3)                                            <------NtERF2       <--                <---------ARR14(3)                                        <---------O2        <------                --------->AGP1                                            <---------ANAC58    -------                <---------AGP1                                            --------->O2        <------                --------->ARR14(3)             ----------->GT1    --------->MYB52(1)          <------          --------->ANAC46                 --------->ALFIN1     =====================================    <-----------GT1 ----------->GT1    --------->YAB1           <---------MYB59<---------ANAC58 ----- <---------YAB1 --------->ARR14(2)     <---------ICU4           <---------MYB52(2)    ----------->GT1 -------YAB1   <---------CCA1(2)      --------->ICU4            <------------MYB.PH3(2)       ------- ------At5g28300<---------ARR14(2)  --------->YAB1            <-----------GT1 <---------LBD16 <------ -------GT1  --------->HSFB2a(2) ------>ZmHOX2a(1)<---------ARR14(2)      <---------ANAC58    <------   accattataccccctccagatcttgtaatatgttcctgtaataatgtgagggtatattggtatataactaactatctcgtggcgggagaggttaagacgt  23751100        <---------SPL7      --------->ALFIN1       --------->MYB46(3)  ------->MYC3     --------->MYB52(1)    <-------MYC3     <---------At5g28300   <-------MYC2    <-----------GT1        <-------PIF5 --------ANAC58            ------->PIF5 --------ANAC58           ============================================bZIP_DOF --------ANAC46           <---------O2 ----NtERF2               --------->TGA1a ---bZIP60(2)  --------->ANAC58 -->TGA1a      --------->ANAC58 ---TGA1a    <------NtERF2--------->ANAC55(2) ---ANAC58--------->SPL7<-------------DYT1                               --------->ANAC55(2) ===MYC_MYB --------->LBD16------->MYC2--------->ANAC58                  <---------ANAC55(2) ---->ALFIN1<------NtERF2 <---------bZIP60(2)                            --------->ANAC58 -->O2 --------->ATERF1(2)--------->ANAC46                               --------->ANAC58 ---ANAC58<---------LBD16 --------->O2 --------->ANAC58    <----------DOF2 ---O2 <---------ATERF1(2)<---------TGA1a     <-----------------AGL2 <---------At4g35610        <----   ggcgaattaccggccggaagcaccattcacgtggctctcacgagcaatactagtattgggcctttttattcagataagtaatgggctatggcccaatttt  23751200                                                   <---------ANAC46                                               <----------DOF2                                              --------->MYB52(2)                                             <-------TEIL                                            <---------ARR14(2)                                            --------->GLK1(2)                        --------->HSFB2a(2)                                         <---------TOE1(3)                           >>>>>>>ZML2                                         <---------TOE2(3)                           <---------HSFB2a(2)                                    --------->ATHB12                                 <---------HSFC1(1)                                   --------->AHL20(2)            --------->ANAC58    --------->HSFC1(1)                                   <---------AHL20(2) <---------MYB52(1)  --------->MYB52(2) --------                           --------->ANAC46 <-----------ARR10    --------->ANAC58 --------->ARR11(3)            <---------AHL20(2)   --------->TOE2(3) <---------ANAC58    --------->TOE2(3)   <------ZmHOX2a(1) -----YAB1  --------->AHL20(2)----------->RAV1(1)  <---------ANAC58 ----------->RAV1(1) <------ZmHOX2a(1)   catttatcccatatttaaatttgacttacaaacaacattaattgaggttctttgctggtatgttgacaaacaacattagttgaagttctaggaggaggtt  23751300                                      <---------ANAC46                                      <---------O2                                      <---------bZIP60(2)                        ----------->GT1 --------->ALFIN1           --------->ANAC58                       ----------->GT1--------->O2                 --------->ANAC58                     ---------->DOF2  <---------TGA1a              --------->ANAC46                     ===========================bZIP_DOF         ----------->RAV1(1)              ==================================bZIP_DOF         --------->AtMYB61            <------              <----------DOF2         --------->TGA1a         <-----------GT1                 <------       <---------AHL20(2)             ==============================================bZIP_DOF --------       --------->AHL20(2)             <---------ANAC58        --------->ANAC46     ---------->DOF2    ------->TEIL  <---------TOE2(3)   <---------ANAC58  ----------->GT1    ----------->GT1 <------ZmHOX2a(1) --->GT1   <---------AHL20(2)     <------ZmHOX2a(1)<------ZmHOX2a(1)     ---------->DOF2<-----------RAV1(2)   ttaatgcatttattttctttaagaaaaggaaaattaggagacgtggacgaataggaactcgtataaaccacacaaaaaagaaataaaaagacaggagctt  23751400  Previous    Next  AGI:  At5g58760.1    Description:  DDB2 (DAMAGED DNA-BINDING 2); nucleotide binding. similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT1G80710.1); similar to UV-damaged DNA binding protein 2 [Oryza sativa (japonica cultivar-group)] (GB:BAB16450.1); similar to hypothetical protein OsJ_000312 [Oryza sativa (japonica cultivar-group)] (GB:EAZ10487.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61895.1); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro Range:  from: 23747726    to: 23750924    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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