Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   <---            <-----------GT1                     <---------YAB1                                -------      <------ZmHOX2a(1)                         --------->ICU4                                <------     ----------->GT1       <----------DOF2 <---------ANAC58                                  ------>ZmHOX2a(2) ------>ANAC58             <---------DAG2  <---------ANAC46                                 <------ZmHOX2a(2) ------>ANAC58          <-----------GT1    <---------ANAC58                   *TSS         <---------ARR14(2) --------------AGL1   <----------DOF2   <---------MYB52(1)               --------->ZAT18   <---------ARR11(3) --------------AG   ---------->ID1     <-------GAMYB               --------->DAG2          --------->ARR14(2) ---->MYB52(1) <----------DOF2     <-----------GT1                ---------->DOF2          --------->ARR11(3)   acgcataaggaaaataacttttgtctttacttttttttttcggttgagtgatgatggagagcaaaacaaaaagtgtgaacaaactcagagcgggatctag  23714700                                                                <---------WOX13(1)                                                 --------------->AtSPL8 ------------>CBF                                         <---------DAG2<---------DAG2  --------->ANAC58           ---                                         <----------DOF2       <------------CBF                   ---     <---------MYB52(2)                <---------At4g35610    --------->ATHB12                    <-- ------GLK1(2)                         --------->At4g35610   <---------YAB1      ----------->RAV1(1) -->HSFB2a(2)                     --------->WOX13(1)   <----------DOF2 --------->ANAC58           <-- ---HSFB2a(2)                 ----------->GT1  <-----------RAV1(1)   ---------->DOF2         --------   aatttgaactaacattctcagtcaaaaacaaaatgtaaatcagctttttttgttgtactttttgtgattgagaaagcaatagacaacagttgagacgctg  23714800                                                        <----------DOF2                                                        <---------DAG2                                                      ------>NtERF2                                                    <---------RAP2.6(2)                                                    --------->ATERF1(1)                                                    <------NtERF2        <<<<<<<<CAMTA3                             <---------ATERF1(1)       <-------MYC3                                ------>NtERF2       ------->MYC3                                --------->ABI4(2)       ------->MYC2                               --------->ALFIN1       <-------MYC2                               <---------DEAR3(1)      --------->ANAC58                          --------->At4g35610      --------->ANAC58                          <---------At4g35610      --------->ANAC46                          <---------ATERF1(1)   --------->ZAT14                             <---------MYB46(3)   <---------ZAT18                         --------->ETT(2)   <---------ZAT14          --------->LBD16<---------ANAC58 --------->ANAC46          <---------LBD16 <---------ETT(2) ------>ZAT18              <---------HSFB2a(2)<---------LBD16     --------->MYB46(3)    <----------DOF2 ------>ZAT14     --------->ANAC58         <---------ANAC58       <---------MYB52(2) ---------->ID1 -------ZAT18     --------->ANAC58   <-------TEIL --------->ARR14(2)            <---------DAG2 -------ZAT14 <-----------GT1--------->LBD16<---------SPL7      <-----------GT1 <----------DOF2 --------------->TaNAC69(2)--------->HSFB2a(2)--------->SPL7 --------->YAB1<-----------HVH21   ------   tgcactgcacgcgttttgacaagtcaattcccggagaaattcatgtcgtccggtgccgcttttttataacaaacctctgtcacttttgttctttttagtt  23714900                            <---------ANAC55(2)                            <---------ANAC58                            <---------ANAC58                            <---------ANAC46                           <---------LBD16                  --------->AHL20(2)                     <----------DOF2                            -              --------->ANAC58                        <-----------GT1      <<<<<<<<<MYB98         <--              --------->ANAC58  <------ZmHOX2a(2)  <---------YAB1<---------ZAT18                 <---         <---------WRKY38(1)--------->ANAC55(2) <---------MYB52(1)   <----------DOF2          ------- --->ARR11(3) ----------->GT1--------->LBD16   <---------RAP2.6(3)   <---------DAG2       ---------->DOF2   cttgaaccgagtcaacaagaaaaaatagttgcggatcaaatatttgggccgttttgatacttttcagtgggctttatgttacttctattcattcaagcgg  23715000            <---------AHL20(1)            --------->AHL20(1)            --------->AHL20(2)                                                   --------->YAB1       ------------>CBF                                            ------------>CBF --------->YAB1       --------->ZAT18                                             *TSS       <------ZmHOX2a(1)       <---------ZAT18                                            ----------->RAV1(1) -------->ALFIN1  --------->AHL20(2)                             --------->MYB46(3) --------->AHL20(2) -------ANAC46    ----------->TBP                          <---------O2      ----------->GT1 ------DEAR3(1)   <---------AHL20(2)--------->ANAC58       --------->O2 --------->YAB1 -->ALFIN1  <---------AHL20(2)      --------->ANAC58      <-----------STF1--------->At4g35610   gggtgtaagtgcaataaaatataaatacaggggtatttaagcaaatatttcaaaatataagacgtcaacaacaatgagcaggataataatattccagcat  23715100                                      <---------ARR14(2)                                      --------->ARR14(2)                                      <---------GLK1(2)                           --------->ANAC55(2)                   <---------CCA1(2)           <-------                           <---------ANAC55(1)  XXXXXXXXXXXXXXXXXXXX>MIR408            --------->At5g28300                           <---------ANAC58 <----------DOF2    --------->O2       <---------ZAT14                           <---------ANAC58 <---------DAG2     =============================bZIP_DOF                           <---------ANAC46 =============================bZIP_DOF --------->ZAT14        <---------YAB1     <---------ANAC55(2)  --------->ZAT6 --------->TGA1a   <----------DOF2   ccaaacaagtcttattgaactctctcgttccgtcttctccgattcgctttacactacttcttccctcgtctctctctctcgcgcttcactgtgaattaat  23715200               ------>NtERF2               --------->LBD16              --------->ANAC58              --------->ANAC58              --------->ANAC46             <---------LBD16                                                            --------->ZAT14           <---------ARR14(2)                                                 -----------------------          --------->CCA1(1)                                                ==========================          <---------GLK1(1)                                                ------>ZmHOX2a(2)          --------->RVE1(1)                                                ==========================     ------>ZmHOX2a(2)                                                    <------ZmHOX2a(2)         -    <------ZmHOX2a(2)                                                     --------->GLK1(1)       ---    --------->CCA1(2)                                                     ===========================   >>>>>>>>>GATA-4                                                        <---------GLK1(1)       <--   --------->ARR11(3)                                                     ===========================   <---------ARR11(3)                        <------MYB46(1)             --------->ARR11(3)      ----   >>>>>>>>>GATA-2                    ------>ZmHOX2a(2)                  <-----------ARR10       <---   >>>>>>>>>GATA-1         --------->ZAT14   <------MYB83                <---------ARR11(3)      ----   --------->AGP1          <---------ZAT18  --------->MYB59              --------->ARR14(2)    ------   >>>>>>>>>GATA-3         <---------ZAT14<---------MYB52(1)             <---------ARR14(2)    <-----  --------->GLK1(1)--------->AtLEC2 --------->ARR11(3)                   <---------AGP1 <---------ZAT14 --AHL20(2)--------->ARR14(2)       <---------ARR11(3)                  <---------CCA1(2)  --------->ANAC46   cgagagatctaaatatccgccatggacagagcacaattgatcttgttaggtctacctatattcttgttttgttcggatctcttcaacctcttcactcctc  23715300         --------->TOE1(3)               --------->KAN4(2)         --------->TOE2(3)              <---------KAN4(1)    ------>ZmHOX2a(1)                --------->LBD16 ------>NtERF2                      --------->DEAR3(1) >TaNAC69(2)                       <------NtERF2 ==========HOX2a_HOX2a            ------>NtERF2 =HOX2a_HOX2a                    <---------ALFIN1 -------->DEAR3(1)              <---------MYB55(2)                          --------->ANAC46 --->NtERF2                     --------->MYB46(3)                          --------->LBD16 ==========HOX2a_HOX2a         --------->At4g35610                         --------->LBD16 -------ATERF1(1)             --------->ANAC46------>ZmHOX2a(1)            <---------HSFB2a(2) =HOX2a_HOX2a               <---------At4g35610                        --------->KAN4(2) ----->ANAC46               --------->At4g35610                      <------ZmHOX2a(2)              - ------ALFIN1            ------>ZmHOX2a(1)    ==============================HOX2a_HOX2a            <- ----->DEAR3(1)      --------->ORA47(1) <----------TaMYB80    ---------->DOF2                      <- >ZmHOX2a(1)        --------->DEAR3(1) ---------->TaMYB80    ===============HOX2a_HOX2a       <------ ----ATERF1(1)   <---------ALFIN1--------->DEAR3(1)          ------>ZmHOX2a(1)           <----------DOF2   cgcctcctaaacctcagcctcaccgtcctcatcagccaccgcatattcctcaccagcatcgtcctaatgcgatcatccccgaaaccctagactttccttc  23715400                                                                                           <---------ANAC46                                                                                           <---------ANAC58                                                                               --------->At4g35610                                                              --------->ZAT2   <---------At4g35610                      <---------ANAC58                        <---------At4g35610     <---------TGA1a                      <---------ANAC58                --------->ARR11(3)     --------->HSFB2a(2) ---------->GT1       <---------ANAC46        <---------TOE2(3)       --------->ATHB51<---------O2 == --------TOE1(2)   <----------DOF2       <---------MYB46(3)   --------->At4g35610     --------->O2 <- --------TOE2(2)<-----------GT1   --------------->AGL15 ------>ZmHOX2a(2)    <---------HSFB2a(2)<---- -----HVH21<----------DOF2     <-----------GT1<---------TOE1(3)       --------->AHL20(2)   <---------ANAC58   acaggttaaatttcttttatactttcgtgtatttcacttctattggttacggttttgatctctaagctcccattattttgcagaagacaagtggcttagg  23715500                                            ----------->RAV1(2)                                          <---------ARR14(2)                                       <---------ANAC58          --------->CCA1(2)            <---------ANAC58 --------->ANAC55(1)         --------->ARR14(2)  <------ZmHOX2a(2)          --------->ANAC58         <---------ARR14(2)  ========================HOX2a_HOX2a                      <---------TOE2(3) ===================================HOX2a_HOX2a         --------->ANAC46        <---------ARR11(3) -----ZmHOX2a(1)            <---------ARR11(3)          --------->ANAC58        --------->ARR11(3) --ZmHOX2a(1)----------->GT1--------->ARR11(3)------>ZmHOX2a(1)               ----------->ARR10    <-   aggagcaattggatatggaaatacagtagagatcaacttctgcgtctcctgttcttacaagtaattcaatttttcttacttagattttaagaaattcgat  23715600  Previous    Next  AGI:  At5g58630.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN78823.1) Range:  from: 23713334    to: 23714678    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g58640.1    Description:  selenoprotein-related. similar to SELT (SELT-LIKE PROTEIN PRECURSOR), selenium binding [Arabidopsis thaliana] (TAIR:AT3G47300.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83419.1); contains InterPro domain SelT/selW/selH selenoprotein; (InterPro:IPR011893) Range:  from: 23715067    to: 23716993    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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