Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  ------>MYB83                -------->P             --------->MYB46(3)                                         <---------YAB1          --------->YAB1                                                --------->At4g35610         <---------ATHB12                                          --------->YAB1     --------->ZAT14                                              --------->MYB46(3)     <---------ZAT14                                         <---------HSFB2a(2)     <---------ZAT18                              <---------HSFB2a(2) <---------ICU4       <---------ARR14(2) ------->TOE2(3)------>MYB46(1)                   --------->HSFB2a(2) --------->YAB1       --------->ARR14(2) >YAB1 --------->WOX13(1)             --------->TOE2(3)      --------->HSFB2a(2)          <---------CCA1(2)   acatcagtgcaatcatccaacccttctactatatcagaaacatcaacagtttccacaagattaccagaaccatcatcagagagaatgttgtcatatctga  23707900              <---------DAG2              <----------DOF2        --------->TGA1a        <---------TGA1a        <---------bZIP60(2)        --------->bZIP60(2)        <---------bZIP60(1)        =================bZIP_DOF        --------->bZIP60(1)                                                              ----------->RAV1(1)        --------->O2                                                                  --------->ANAC58        --------->DEAR3(1)                                                            --------->ANAC46        <---------O2                                                                  --------->ANAC58        --------->ANAC46                                                       <---------------AGL15       <------NtERF2                                                           --------------->AGL15      <---------ATERF1(1)                                                      ======================      <---------DDF1                                                           --------->TOE1(3)      ------>NtERF2                                                            <---------MYB59     --------->DEAR3(1)              ------>ZmHOX2a(1)                         --------->TOE2(3)     ----------->HVH21              --------->TOE2(3)                         ----------------->AGL1    --------->RAP2.3(1)      <---------At5g28300                              ----------------->AGL2   ------->GAMYB    --------->At4g35610                                       =======================   ===============MYC_MYB   <-----------GT1                                   ----------------->AG  <  --------->DEAR3(1)<---------At4g35610              --------->LBD16       ------>ZmHOX2a(1)        <   tacaacgccgacgtcgctttttagctgaagttacagttcctaaataccaagaacccagagacccctcttcaagactccttacctaaacaagcaacacaaa  23708000        <------ZmHOX2a(1)           ----------->RAV1(1)      --------->LBD16            --------->ANAC58     <---------HSFB2a(2)         --------->ANAC58           ----------->GT1     =================================================================MADS_MADS     --------->HSFB2a(2)         --------->ANAC46    --------------->AGL15     --------------->AGL15 --------->TOE2(3)         <---------------AGL15     <---------LBD16    ----------->RAV1(1)         ----------------->AGL2 ====================================================================MADS_MADS ====================MADS_MADS ---------->DOF2      <-----------------AGL3                          - ---------DAG2       --------->ANAC58               ----------------->AGL3             ---------->DOF2 ----------DOF2      --------->ANAC58            --------->ZAT18              <-----------GT1      --   tacttttccaggattagaagacgaagcaacattaaaagcaacatataagtttgcactaaaaatggaaactactaaacttttaacatctcaaaagctaaac  23708100                          <---------YAB1                         <---------AHL20(2)                                    --------->ANAC58                        --------->YAB1                                         --------->ANAC46                       --------->ICU4                                          --------->ANAC58                       <---------YAB1             <----------DOF2            --------->ZAT6        -- -------->DAG2   --------->DAG2                ------->TEIL         --------->WOX13(1)             -- -------->DOF2  ---------->DOF2<---------------------WRI1---------->DOF2--------->WOX13(1)------->TEIL   aaaaagctacagagaaccaaaagtgattataatggagaaacagacaatgtagcttttacaaaagttgaatccatcaattacactccacgatgaaactcaa  23708200             --------->LBD16         --------->GLK1(2)         --------->ARR14(2)                                       ---------->DOF2         <---------ARR14(2)                                    --------->YAB1                <-------        --------->RVE1(1)             ----------->GT1         <---------ATHB12             <--------- ------->TOE2(3)          --------->DAG2                      <<<<<<<<<ARR2        ----------->GT1 ------->TOE1(3)        ---------->DOF2             <-----------GT1              ---------->DOF2  ---   accttgaaaaaaatccgaaattgctcaaaaggttgagaaaatgaaaaaccctataaaccctacaatcaaaaagacccatggtggaaaggaaatagtcagg  23708300                                                    <------NtERF2                                                   --------->LBD16                                                  <---------DEAR3(1)                                                  <---------ANAC46                                                ------>NtERF2                                               <---------RAP2.3(2)                                               <---------LBD16                                         <---------DAG2               --------->ABI4(2)          --------->ANAC58               <----------DOF2   <---------ANAC58            --------->RAP2.6(3)          --------->ANAC46        <---------HSFB2a(2)      <---------ANAC58           --------->ARR14(2)          --------->ANAC58        --------->HSFB2a(2)      <---------ANAC46      --------->RAP2.6(2)        ---------->DOF2          <---------ETT(2)<---------LBD16--------->MYB52(1)    <---------ARR14(2)     <----------ID1         <---------At5g28300<---------RAP2.6(2)   --------->ALFIN1 --------->MYB52(1) ----RAV1(2)----------->HVH21 --------->DEAR3(1)--------->LBD16 -------->P     <---------At4g35610 --HVH21--------->MYB46(3) <-----------GT1    <---------LBD16 --------->ETT(2) --------->At4g35610 -------->GT1      <---------CCA1(2)  --------->GLK1(2)--------->ARR11(3)    <-----------RAV1(2)   ggggaaaacaacaagcgacctctatcttatcaccgtcgagaagctttttccggcggagatttcgtctaccggtgctgttccagccgaatatcggctcttc  23708400           <------NtERF2          ------>NtERF2        --------->ATERF1(1)       <---------At4g35610       <---------ZAT2       --------->At4g35610       --------->ZAT2       ------>NtERF2       <---------ATERF1(1)      --------->DEAR3(1)                                               <---------YAB1     --------->RAP2.3(1)                                           <---------ZAT14    ------>NtERF2---------->DOF2                                   --------->ZAT14    --------->LBD16                                               <---------ZAT6    <---------ATERF1(1)                                           --------->ALFIN1   <---------ALFIN1                >>>>>>>>>CBP60g           --------->ANAC58            <-----------   --------->DEAR3(1)              >>>>>>>>>SARD1            --------->ANAC46          --------->GLK1(2)   --------->ANAC46 --------->HSFC1(2)                       --------->ANAC58          <---------ARR14(2) ------>ZmHOX2a(1)  <---------HSFC1(2)                   ---------->DOF2     --------->ARR11(3)    --   ttcctccgccgctggcattaaaagcttcgagtgagaaatttggagggaaaacaaaaacaaaaaacgcagtgttccgatagagcttggagaatattgaaga  23708500                                       <---------ANAC58                                       <---------ANAC46        <---------MYB52(2)                                   <---------ANAC58           --------->ANAC58        <---------ANAC46           <---------ANAC58           --------->ANAC46 <---------ARR11(3)               <-------TEIL      <----------DOF2 --------->ARR11(3)            <------MYB83       <---------At4g35610  --------->ZAT14 <---------GLK1(2)      --------->CCA1(2)         --------->ZAT2 --------->MYB52(1) -CBF <-----------RAV1(1)      <------MYB46(1)    --------->At4g35610  <---------ZAT14  <----------DOF2 --------->ARR10     ----------->ARR10 <---------ANAC58       --------->ANAC58          <---------DAG2   gaagatttttgtgggtaagagaagagatttgggaggtacttgtgtgagtagcagctttctccccaagtaacgctgtactagtctctgcaacttttttagt  23708600                                                                                               <<<<<<                                    <------ZmHOX2a(1)            --------->ANAC46              <<<<<<                         <---------AHL20(2)                      --------->ANAC58     <---------AHL20(2)                         --------->YAB1                          --------->ANAC58 <---------RVE1(1)                     <---------AHL20(2)                  <--------P              --------->ARR11(3)                     --------->AHL20(2)                  <---------WOX13(1)      <---------ARR11(3)        --------->AHL20(2)      ---------->DOF2         <-------GAMYB ---------->DOF2 --------->AHL20(2)        <---------AHL20(2)      --------->MYB52(1)     <---------MYB46(3)   --------->ALFIN1   <<<<<<       <---------ATHB12  --------->AHL20(2)<---------TOE2(3) --------->CCA1(2) ----------->ARR10   ctaatcccaattaaacagcgagattaattaaaactaaaggacattgatgttgttttttggttgatacacgcgaaaagagtggagatttttaattttggtc  23708700                                                                                     <---------ANAC58                                                                                 ---------->DOF2                                                                               <---------YAB1                                                                        <---------ANAC58  --------->ZAT18<---------AHL20(2)                                     <---------ANAC58 <<<<WRKY26      --------->AHL20(2)      <-----------GT1               --------------->AtSPL8      <- <<<<WRKY38  ------>ZmHOX2a(1)   <-----------GT1       <----------DOF2 --------------->AtSPL3    <--- <<<<WRKY43 <---------MYB59     <-----------GT1     <-----------GT1  <----------DOF2 <---------ANAC58   aatttgcactatttcctaattaaaaatccaaaatttacccatttcaccctcttatttctttatttcttctactttcgtactattaaagcttgctcatcac  23708800  Previous    Next  AGI:  At5g58610.1    Description:  PHD finger transcription factor, putative. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G05380.2); similar to DNA binding [Arabidopsis thaliana] (TAIR:AT1G05380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21435.1); contains InterPro domain Acyl-CoA N-acyltransferase (InterPro:IPR016181); contains InterPro domain Tudor-like, plant (InterPro:IPR014002); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Agenet; (InterPro:IPR008395); contains InterPro domain Zinc finger, FYVE/PHD-type; (Inter Range:  from: 23703997    to: 23708279    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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