Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          <----------DOF2                      <------ZmHOX2a(2)                      <---------RVE1(1)                     <---------AGP1                     <---------ARR11(3)                     <---------ARR14(2)                     --------->ARR11(3)                     --------->AGP1                     --------->ARR14(2)                                                             <                    <---------CCA1(2)<---------GLK1(2)                                              -            <---------WOX13(1)     <---------TOE2(3)                                               <-          <---------MYB46(3)<---------TOE2(3)                                                      --      <---------TOE2(3)------>ZmHOX2a(2)    --------->YAB1 <----------DOF2          <---------ARR11(3) ------->YAB1      ----------->ARR10<<<<<<<<<RAP2.2        <---------DAG2  <---------YAB1          <- ->GLK1(2)--------->ATHB12  <---------TOE1(3)            ------->TEIL   ------>ZmHOX2a(1)          --   aacatactgaggtgattggcacagatctttagggttttagattgtctcataacaagacgaacttttccagtttccttatgcttcaataacttcacagttc  23698600           ------>ZmHOX2a(1)    ------>ZmHOX2a(1) ---------ARR14(2) -------->ARR14(2)                                                                                --- --------ZAT2                                                    --------->YAB1                   --- ------->At4g35610          <----------DOF2         <---------GLK1(1)                             <-- --------At4g35610<---------MYB46(3)        --------->ARR11(3) <---------ARR11(3)            -------- ------->ZAT2   <---------MYB52(1)        <-------TEIL   ------>ZmHOX2a(1)          --------->ARR11(3)   cagctcctctctccttccattggttcccttctttatcgaatcgatacatcttcgatttcctacaaaatcataaacccagaagaatacatcttctatcaaa  23698700                                                                                                    <                                                                                                   --                                                                                                  <--                                                                                                 <---                                                                                                 ----                                                                                                <----                                                                                                <----                                                                                              -------      --------->ANAC58                                                                        <------      --------->ANAC58                                                                        -------    <---------ALFIN1                <----------DOF2                                     <------ZmHOX2a(2) --------->ANAC46                   <---------DAG2                         ----------->GT1  --------- <---------ETT(1)            <---------ALFIN1                        ------->GAMYB     --------->AGP1 ------>GLK1(2)              --------->ZAT6                         --------->ANAC46   --------->ARR14(2) ------>ARR14(2)           ----------->RAV1(1)                 --------->YAB1  >>>>>>>>>MYB98<------ZmHOX2a(1) -------ARR14(2)       --------->GLK1(2)          --------->ANAC58--------->MYB52(1)   <---------ARR14(2) ->YAB1               --------->GLK1(1)           --------->ANAC58<-----------GT1  <-------TEIL<-----   aatccgacactcatcttctatcgaaaatccaacactcactttaaccagaggcaaggaaactagaatattaacggaacgagtaacatacagatcgaggacg  23698800                                                               <---------At4g35610                                                               --------->ZAT2                                                               --------->GLK1(1)                                                               <---------ZAT2                                                          ----------->RAV1(2) ------NtERF2                                         --------->ZAT2 ---->NtERF2                                          <---------ZAT2 -------ANAC46                                        --------->At4g35610 ---NtERF2          <---------MYB46(3)            ------>ZmHOX2a(2) ----->ATERF1(1)    xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<---------At4g35610 -----ATERF1(1)    <---------DEAR3(1)            <------ZmHOX2a(2) -----RAP2.3(1)    <---------AtMYB61            --------->MYB52(1)   <---------MYB52(1)             < -->SPL7           --------->ALFIN1            ------->GAMYB   --------->At4g35610   --------->WRKY38(1) ---ORA47(1)      <---------MYB52(1)          --------->MYB46(3)  <---------LBD16    --------->WRKY45 -->RAP2.6(3)   <---------ATERF1(2)         --------->MYB52(1) <---------GLK1(1)     --------->WRKY12 -->HVH21       <---------DEAR3(1)     --------->ANAC58  --------->MYB52(1)         <---------MYB52(1) ----DEAR3(1)  <---------LBD16         --------->ANAC58  -------->P --------->LBD16 --------->DOF5.7(2)   gcgtcttcatcttcttcgccggtggtgactgcaacctcttcaagcctaacgatcggagctacctgagctccggtgtcttcatcttcgttgacttcggttt  23698900                                                                     <---------ZAT14                               --------->ANAC58                      --------->ZAT18                             <---------ANAC58                      <---------ZAT18                             <---------ANAC58                      --------->ZAT18      <---------MYB46(3)                            <---------ZAT14                 --------->ALFIN1          <-------GAMYB                            --------->ZAT14                 <---------ANAC58          <---------ANAC58              --------->ANAC58 --------->ANAC46             <---------ANAC58          <---------ANAC58  <---------REM1(2)         <---------ZAT18               --------->ALFIN1        <----------DOF2 ---------ICU4--------->ANAC58 --------->ANAC58       ---------->DOF2--------->ZAT14 <---------MYB46(3)   catcttcacggttctcacgctctggctcagtgctcgccatctctgtattgaaacttgaaagtgtgtgtgtgtgctctgcaacttctttggttgttcaatt  23699000                        *TSS             <---------HSFC1(1)             --------->HSFC1(1)             <---------HSFB2a(2)             --------->HSFB2a(2)            <---------ANAC46                                            <---------At4g35610   -------        --------->HSFB2a(1)                                  ---------->DOF2             <---------ZAT18        <---------HSFC1(2)                              <---------CCA1(2)                --------->ZAT18        --------->HSFC1(2)                          <----------DOF2     --------->At4g35610  --------        <---------HSFB2a(1)                      <-----------GT1   --------->MYB59--------->ZAT6   tgggagaagaagtttcgagaaccagaagaaaaaactggaaccagggtttttaaactttatatccaaagttaggcttctgaattatctctagtgggctaac  23699100                                                --------->ICU4                             <---------ETT(2)                                                <---------YAB1                           --------->ARR14(2)     <---------ARR11(3)               --------->ANAC58                           --------->ZAT18     --------->ARR11(3)               --------->ANAC46                           <---------ZAT18    <---------ICU4                    --------->ANAC58                           <---------ZAT14   --------->ICU4          ---------->DOF2    --------->YAB1              ---------->DOF2<---------ARR14(2) -->MYB52(1)     ---------->DOF2   --------->ARR14(2)               ------->TEIL --------->ZAT14 --->HVH21 <-----------HVH21       <---------ARR14(2)            <---------REM1(1)      <---------CCA1(2)   aggtcattatctcggtcatttaagcccattaaggccctatacgacaattcatgattttggtatgtagatgaagctagaaagtgtgaactcgtatcgacaa  23699200                                  <---------At4g35610                                  <---------ZAT2                                  --------->At4g35610                                  --------->ZAT2                                <---------ALFIN1                              ----------->RAV1(1)                           --------->ANAC46                           --------->ANAC58                                <---------YAB1                        <------ZmHOX2a(1)                  <-----------GT1 <---------ANAC55(2)                      --------->ANAC58    --------->ARR11(3)        <---------AHL20(2)                      <---------TOE2(3)   <---------ARR11(3)------->TEIL   <---------ANAC46              <---------ICU4  <---------ALFIN1          <---------------AtSPL8                     --           --------->YAB1  --------->ANAC58       --------->ICU4    --------->AHL20(2)            ---    <------ZmHOX2a(1) --------->ANAC58---------->DOF2   --------------->AtSPL8        <----------DOF2   tatagaggatgaaacatcatggctaaggaacgccacagctcaaagacctgtaatgagtaatgtaccatatttaaattatgtataatctctttacaaaact  23699300                       --------->ARR11(3)                            ------>ZmHOX2a(1)                <---------ALFIN1                             --------->ANAC46       --------->AHL20(2)             --------->ANAC58                           ------->TEIL--------->TOE2(3)<---------AHL20(2)          <---------ARR14(2)                            --------------->AtSPL3 --------->ANAC46          <---------GLK1(2)                             <---------------AtSPL8 --------->ANAC58          --------->ARR14(2)                            --------------->AtSPL8 --------->ANAC58   <-- ------->DAG2--------->ANAC46            <---------At4g35610------->TEIL    --------->TOE1(2)     <-- ------->DOF2--------->ANAC58 <---------ANAC46       <---------YAB1 --------->TOE1(3)--------->AHL20(2)   aaaagtaatacagatactccacatttatcttggagtagaatgtagatgatgctctatgaatgtactccatccttaacacatacgaaaaaaatttgaactg  23699400                                                                                                <----                                                                                               ------                                                                                               <-----                                                                                               <-----                                                           --------->AHL20(2)          --------->AHL20(2)                                                         <----------DOF2            <---------AHL20(2)                                                 ----------->HVH21                  --------->AHL20(2)                                            --------->AtMYB61                      <---------AHL20(2)                        <----------DOF2     <---------ALFIN1               --------->ALFIN1 <--------                --------->ZAT18            --------->MYB46(3)       ------->TEIL--------->AHL20(2)                <---------ZAT14         <---------ETT(2)<---------ICU4  <---------AtMYB61  --------->AHL20(2)                --------->WRKY38(1) <---------TOE2(3)   --------->YAB1  <---------DEAR3(1) <---------AHL20(2) --------DOF2   --------->WRKY12    <---------TOE1(3) --------->GLK1(2) --------->ALFIN1<---------AHL20(2) -------DAG2 <---------ANAC46  <---------ZAT6   --------->At5g28300--------->MYB52(1)  <---------AHL20(2)   ctttttttttctcagtcgtggactgcctttgtagtgttaaggtagaccaccgtgacaatctttatatatgaacggaggtggattatttatttattaattt  23699500  Previous    Next  AGI:  At5g58590.1    Description:  RANBP1 (RAN BINDING PROTEIN 1). Identical to Ran-binding protein 1 homolog c (RANBP1C) [Arabidopsis Thaliana] (GB:P92985;GB:Q9LUZ8); similar to SIRANBP (Ran-binding protein 1a), Ran GTPase binding [Arabidopsis thaliana] (TAIR:AT1G07140.1); similar to unknown [Brassica rapa] (GB:ABB97039.1); contains InterPro domain Pleckstrin homology-type (InterPro:IPR011993); contains InterPro domain Ran Binding Protein 1; (InterPro:IPR000156) Range:  from: 23697305    to: 23699024    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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