Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         --------->AHL20(2)                                                      --------->AHL20(2)                                                      <---------AHL20(2)   --------->ATHB51                                  <---------AHL20(1)   --------->ATHB12                                 --------->YAB1  --------->ICU4                                  --------->AHL20(2) ----MYB83                                    --------->WOX13(1) ----MYB46(1)                 --------->GLK1(2)   <---------AHL20(2) ----P                        --------->ARR11(3) --------->YAB1 --TOE2(3)             ---------->DOF2      <---------ATHB12      ----------->GT1 --------->AtLEC2 ->MYB59  --------->AtLEC2    <---------ARR11(3) --------->AHL20(2)     <-----------GT1   -----------   tggcattatttgatgcaaaaaatactaaagaaaatctcacattgaaatcaattaaaataattttcttatggtatatacaagttgatgcaaaattgataaa  23687200                           =====================MYC_MYB                           <---------TGA1a                           ================================================bZIP_DOF                           <---------O2                           --------->ANAC55(2)                           --------->O2                     <---------AtMYB61                 <---------ANAC46                     --------->At4g35610                 ====================bZIP_bZIP       --------->ARR14(2)                 <---------ANAC55(1)         <-----------HVH21                 --------->TGA1a            ===============================bZIP_DOF                 ===============================MYC_MYB                                       -------                 --------->O2               <---------TGA1a                                   <------                 <---------O2               --------->O2                                      <------                 <---------TGA1a            --------->TGA1a                                   -------                 <---------ANAC55(2)   --------->ANAC58                                       -------                 <---------ANAC58      --------->ANAC58                                      <-------                 <---------ANAC58      ===============MYC_MYB       <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)            --------->ANAC58           -------->P    <---------ARR14(2)                   --------->HSFB2a(2)            --------->ANAC58        <------NtERF2    --------->GLK1(2)                    --------->HSFC1(1)       --------->ANAC58    <---------ANAC55(2)--------->ALFIN1  <----------DOF2           <---------HSFB2a(2) --------->AHL20(2)--------->ALFIN1--------->ANAC46 <---------GLK1(1)  <------------------------ANAC81 >GT1  --------->ANAC58<-----------HVH21    <---------O2        <---------DAG2      <---------YAB1   agattaaacaaggcaagagacgtgtggtcatgtgtctcggcaacccatgtgagggaatctgaatcactttttttttttttttttttatgtttctcgaatc  23687300          --------->YAB1                           <---------ICU4          <--------ATHB1                           --------->YAB1          -------->ATHB1                          --------->ICU4          --------->ATHB12            <---------TOE2(3)          --------->ATHB51     <---------------AGL15         --------->ATHB12         <---------ATHB51      --------------->AGL15         --------->ATHB51         <---------YAB1       <-----------------AGL3 ----------->GT1         <---------ATHB12     <-----------------AGL2 <---------YAB1 >TEIL   --------->ICU4  --------->ANAC55(2)      <---------ATHB12 -----ARR10              <---------ANAC55(2)    --------->WOX13(1) ---ARR14(2)             ----------->GT1        --------->YAB1 -->GLK1(2)              <---------ANAC46     <---------YAB1 <---------AHL20(2)               ------- -->ARR14(2)             <---------ANAC58  --------->AHL20(2)--------->AHL20(2)       <---------ANAC46 --CCA1(2)<---------ICU4 <---------ANAC58  --------->ICU4   <---------AHL20(2)      --------->PCF5   tgagtagcacaataattgaattgtgtttcgtaactaaattagggatttattaatcatgaaaaattatttgatgaaatcaaattgtggtccgtctagttga  23687400              --------->AHL20(2)                                     ------>ZmHOX2a(1)              <---------AHL20(2)                                    --------->TOE2(3)             <---------AHL20(1)                               <---------ANAC58             --------->AHL20(2)                    --------->YAB1--------->ARR14(2)    <-----------HVH21      ------>MYB83                        --------->PCF2 <---------ATHB51 <---------MYB52(2)  -------      ------>MYB46(1)       ---------->DOF2  ----------->RAV1(1) <---------ARR14(2)   --------->bZIP60(2) -->WRKY12   <---------AHL20(2)          <-----------TCP11(1) <---------ANAC58   --------->AtMYB61   cttataccagcccaaattatttagcgaatataaagcccaaactaggcccacaataacaaattatgcgtttcctcaaacgaacaccaccatgtcatgaacc  23687500                                                                                        <-----------GT1                                                                                        --------->ARR11(3)                                                                       --------------->AGL15                                                           ----------->GT1              --------->ARR14(2)                                                          --------->DAG2                <---------ARR14(2)                                                    --------------->AGL15              --------->CCA1(1)                                   <----------DOF2  <---------------AGL15          --------->AHL20(2)                    --------->ANAC58               ----------------->AGL3          <---------AHL20(2)                    --------->ANAC58   <-----------GT1   ---------->DOF2<----------DOF2--------->RVE1(1)        <---------ARR14(2)        <---------ANAC58 ----------------->AGL1   <---------LBD16   <------        --------->GLK1(2)         <---------ANAC58 ====================================MADS_MADS  <-- >TEIL  --------->ARR14(2)    <------------CBF  ----------->HVH21     ----------------->AGL1  <------   attctagccgaatccaaatagaacgaaactaaaattgctttaatccatatgtgaccagataaagtaaaacactccttttggggaaataaatatccacttt  23687600                                                               ------>MYB83                                                               -------->P                                                               ------>MYB46(1)                                                              --------->MYB55(1)                                                             <---------MYB46(2)                                                             <---------MYB55(2)                                                             --------->MYB46(3)                                                             <---------MYB111(1)                                                             --------->AtMYB61                                                             <---------MYB111(2)                                                         <---------MYB52(2)                                                         --------->MYB46(3)                   -------                                                   --------->MYB46(3)                         -------                                          <---------ANAC58 -------->P                         -------                                          <---------ANAC58------->GAMYB              <---------AHL20(2)                                       <---------ZAT18   <---------MYB55(2)         --------->AHL20(2)                                      <---------ANAC58   <---------MYB111(2)        <---------AHL20(2)     <----------DOF2                <---------ANAC46     <---------MYB111(1)    --------->AHL20(2) ----DOF2            *TSS      ------>MYB83        --------->REM1(1)       <<<<<<<<<WRKY18    ------- ---------GT1       --------->AHL20(2)<---------ANAC58--------->MYB46(3)<---------ZAT6        <------ ---DAG2       ------------>CBF------>MYB46(1)   ----------->RAV1(1)  <---------At5g28300     -------   tcaccatctttttggtaaacaataaaacaaaccaaattttgtgtgcttgagcaacaacaactaccaaccagttactgtcaaaaaaaataaatgaaaacgt  23687700                                                                              <---------At4g35610        --------->DAG2                    <---------MYB111(1)              <---------ZAT2      ---------->DOF2         <---------------AGL15                        <---------At4g35610 -->ANAC46  <---------ANAC58  --------------->AGL15                        --------->At4g35610 -->ANAC55(2)                <---------HSFB2a(2)                           --------->ZAT2 -->ANAC58  <---------ANAC46 <-----------------AGL1                  <---------MYB52(1) -->ANAC58  <---------ANAC58 ----------------->AGL1           <---------ARR11(3)            <-------- ---ANAC55(2)           <---------ZAT6    --------->MYB46(3)  --------->ARR11(3)  <----------DOF2 -->ANAC55(1)           <-----------RAV1(1)               ---------->DOF2 <-----------RAV1(1)    ----   aatcgaagaaaaggtcgtgttttctagtgttgcagaaaatggcaactactagtactactacaaagctctccgttctctgctgctctttcatttcatctcc  23687800                                                                                                    -                                                                                                   --                                                                                                 ----                                                                                                -----   --------->WRKY45                               ------>ZmHOX2a(1)                             -----   --------->WRKY12                           --------->ARR14(2)         <----------DOF2        -----   --------->WRKY38(1)                     --------->ANAC46  --------->ARR14(2)                <----- -At4g35610 ------>ZmHOX2a(1)             --------->LBD16    <---------ARR14(2)               <------ -->ZmHOX2a(1) ------>ZmHOX2a(1)      --------->ARR14(2)    <---------GLK1(2)              <---------GLK1(1)   tctcgttgactctcctccttctctcgccttcttctctccgattccacgattcctcactgtccgaatcgcgactagctttagatcgagctctaggtttccg  23687900                               ----------->HVH21                            <------NtERF2                           ------>NtERF2                           --------->ABI4(1)                          <---------DEAR3(1)                          --------->DEAR3(1)         --------->ANAC58 --------->RAP2.3(2)        <---------LBD16   --------->RRTF1(3)      --------->GLK1(2)   --------->RAP2.3(3)      <---------ARR14(2)  --------->ANAC46    --------->ARR14(2)      --------->ARR14(2) --------->ATERF1(1)  <---------ARR14(2)  --------->AtMYB61     <---------ATERF1(1)  <---------HSFB2a(1) ----->NtERF2          --------->ANAC46  --------->LBD16 ------->RAP2.6(2)--------->ZAT14       <---------HSFB2a(2) -->NtERF2--------->LBD16--------->RAP2.3(1) --------->HSFC1(2)        <----------DOF2              < ---->LBD16  --------->ANAC58  <---------MYB52(1)                    --------->LBD16                < ---->ANAC46 --------->ANAC58<---------ANAC46<---------HSFC1(2)    <---------LBD16            <------ ->NtERF2--------->ANAC58--------->ERF1 --------->HSFB2a(2) --------->At4g35610               <------ ----RAP2.6(2)    <---------ZAT14      <---------LBD16      <---------At4g35610               <------ ---LBD16--------->ANAC46--------->DEAR4(2)  --------->HSFB2a(1) <---------RAP2.3(3)       <---------MYB52(1)   gccaccaaaatccgcaagtcttcactcgccgccgtgatgtttccggaaaattcggttttatcagatgtctgcgcgtttggagtcactagcatcgttgcgt  23688000                                                                                       --------->ANAC58                                                                                       --------->ANAC58                                                                                       --------->ANAC46                                                                             --------->AHL20(1)                                       <---------HSFB2a(1)                   --------->AHL20(2)                                 ------->MYC3                                <---------AHL20(2)                                 <-------MYC3                           --------->AHL20(2) ---------ANAC58                --------->O2                --------->WOX13(1)   --------->AHL20(2) ---------ANAC58                --------->TGA1a           <------ZmHOX2a(2) <---------AHL20(2) ---ANAC58              <---------WOX13(1)                <---------ATHB12  --------->AHL20(2)   <--- ---ANAC58     <---------LBD16  <---------O2      <---------GLK1(2)   --------->ANAC55(2)  <------NtERF2 ---ANAC46   <---------LBD16    <---------TGA1a<-----------RAV1(2)  <-----------GT1 <---------REM1(2)   tctcgtgcctcggtttctggggagagattggcaaacgtggcatcttcgaccaggttttcgatcattcaattcacttaattaaattatacacgcgtcgatt  23688100  Previous    Next  AGI:  At5g58560.1    Description:  phosphatidate cytidylyltransferase family protein. Identical to Probable phytol kinase 2, chloroplast precursor [Arabidopsis Thaliana] (GB:Q67ZM7;GB:Q67ZA1;GB:Q8LAW9;GB:Q9LV00); similar to VTE5 (VITAMIN E PATHWAY GENE5), phosphatidate cytidylyltransferase/ phytol kinase [Arabidopsis thaliana] (TAIR:AT5G04490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21418.1); contains InterPro domain Phosphatidate cytidylyltransferase; (InterPro:IPR000374) Range:  from: 23687621    to: 23690103    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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