Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 <---------AHL20(2)                                                                               --------->AHL20(2)                                                                           --------->AHL20(2)                                                                          <---------ARR11(3)                                                                          --------->AHL20(1)                                                                          <---------AHL20(1)                                                                          --------->ARR11(3)                                                                       --------->AHL20(2)                                                                      --------->YAB1                                                               --------->GLK1(1)                                                             <xxxxxxxxxxxxxxxxsmallRNA(i)                                                         <xxxxxxxxxxxxxxxxsmallRNA(i)  <---------HSFB2a(2)                               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  --------->HSFB2a(2)                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) -----ANAC58                ----------->GT1         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) -----ANAC58            ---------->DOF2             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   ttatctagaaactgttcaaagtatgagaaagagtagaattagtttttcaagtgagaaactctgagaaacccataaaaatatttatatatcatctattgat  23672100                                      <---------ICU4                                    <---------TOE2(3)                      --------->AHL20(2)                      <---------AHL20(2)                     --------->AHL20(1)                     <---------AHL20(1)    <---------YAB1                <---------AHL20(2)<---------AHL20(2)                --------->AHL20(2)--------->AHL20(2)               --------->YAB1    <---------YAB1              <---------YAB1     --------->ICU4           <---------YAB1     <---------YAB1 --------->AHL20(2)        --------->AHL20(2)    <---------AHL20(2)        <---------AHL20(2)    --------->AHL20(2)                                             <-------GAMYB        <---------AHL20(1)--------->AHL20(2) <---------AHL20(2)                              <XXXXXXX        --------->AHL20(1)<---------AHL20(2)--------->YAB1                              <----------DOF2     <---------AHL20(2)   --------->YAB1 <---------AHL20(2)                            <---------ICU4   <---------YAB1    --------->AHL20(2) --------->AHL20(2)        <-----------GT1--------->TOE2(3)   <---------AHL20(2)<---------AHL20(2) --------->ICU4     <----------DOF2  <---------At4g35610   caaatattattttattattaaaatttaattatataattaatatttattaaaatactaatctcttttttttactgatgaagatgccttaatcttttcgttg  23672200                                                                       --------->AtMYB61                                                          <---------PCF5                                                          --------->PCF2        <---------ARR11(3)                                --------->TOE2(3)         <---------TCP16(1)    --------->ARR11(3)               --------->ARR11(3) --------->AHL20(2) <---------At4g35610    ---------->DOF2               <---------ARR11(3)<---------YAB1      <---------ZAT2   --------->MYB46(3)           ------>ZmHOX2a(1)   <---------ICU4   <---------YAB1      --------->ANAC46   ------>ZmHOX2a(1)           <--------HAHB4 --------->YAB1     --------->ANAC46                   <  --------->TOE2(3)           --------->ICU4 --------->ICU4      --------->ANAC58                  <- XXXXXXXXXXXXXMIR3932A/B      <---------YAB1 <---------ATHB51    --------->ANAC58<---------YAB1    --   tcatcctaaattcctaatatctgtattttgtgatcattaaaaacacaattatgttagcagggaccacaatccaccactaaaagataattatctgtaagaa  23672300                                                                              --------->HSFB2a(2)                                       --------->YAB1                         <---------HSFB2a(2)                                       -------->HAHB4                 <---------ANAC46                                     <---------TOE2(3)              --------->ZAT14                 -                                   --------->AHL20(2)               <---------ZAT14     <---------ZAT6                           --------->YAB1                           --------->ZAT18     ----------->GT1                        --------->YAB1<---------YAB1            <------ZmHOX2a(1)     ----------->GT1               ----------->RAV1(1) <---------AHL20(2)           ====================HOX2a_HOX2a ----- ---------AHL20(2)     <---------AHL20(2)              <---------AHL20(2)    ------>ZmHOX2a(2)  ----- --------AHL20(2)     --------->AHL20(2) <---------YAB1--------->AHL20(2)  --------->ARR14(2)   <---- ------->AHL20(2)<---------ALFIN1 --------->AHL20(2)  --------->AHL20(2)   <---------ARR14(2)   <----   attaaatgaaattggtccaacacatataataagaaaattaatgataatttgcaaaattaaaatacaggagcgtagtggatcgagaagagagtgtaaaaat  23672400          --------->TOE2(3)     <----------DOF2 -------->SPL7                                                            ---------->DOF2 ---------->AtSPL8                      ---------->DOF2          --------->LBD16 ---------->AtSPL3                   --------->MYB52(1)     *TSS--------->LBD16 -----------AtSPL3             ---------->DOF2     --------->GLK1(1)<---------GLK1(1) -----------AtSPL8        ------>ZmHOX2a(1)        <---------GLK1(1)--------->GLK1(1)   cgtactgctttacataaatgaagtcgtcctcactaaagctaacaaagatgaagaaatccaaaactccctgaaatctgaaagcacaaaacttccattttca  23672500                                                                                               <-----                                                                                               ------                                                                                        ------>NtERF2                                                                                   <---------ARR14(2)                                                                                 <---------ANAC58                                                                              <---------DEAR3(1)<----                                                      <---------ANAC58     --------->ALFIN1    ------                                        <------NtERF2 <---------ANAC58     <---------AtMYB61  -------                                        --------->At4g35610            <------NtERF2<------ZmHOX2a(2)                                        <---------At4g35610     <---------ANAC58 <---------ANAC58----                               <-------TEIL         --------->ALFIN1  --------->LBD16  --------->LBD16           <---------YAB1    <---------SPL7       <---------ANAC58   <---------ANAC46  <---------ETT(1)         <---------ZAT18 <---------ETT(2)         <---------ANAC58  <---------LBD16--------->ARR14(2)         --------->ZAT18 --------->ETT(2)  ------>NtERF2        <---------ANAC58<------NtERF2 =======   tctatctcaagtgctcattgttcattgtcgacgtacaatggctgcagccttggagtgctggtcgagtcgtgccggagatggtggcgatcccgacaacgat  23672600                                                 <---------ANAC58                          =======================================MYC_MYB                ----------->HVH21                          --------->ANAC58       <---------ANAC55(1)               <---------ARR14(2)      <-----------RAV1(2) ----------->HVH21      --------->ANAC55(2)               --------->ARR14(2)     <------ZmHOX2a(2)    --------->TGA1a        <---------ANAC55(2)             --------->HSFC1(2) ----ARR14(2)             --------->ANAC46       <---------ANAC58                <---------HSFB2a(1) --->ARR14(2)             --------->ANAC58     <-----------GT1                   --------->HSFB2a(1) --ZmHOX2a(2)          --------->TOE1(2)  --------->LBD16----------->RAV1(2)     <---------HSFC1(2) --->ARR11(3)         --------->ANAC58   <---------ANAC55(2)                    <---------TOE1(3) >GAMYB--------->MYB59--------->ANAC58   --------->ANAC55(2)                    <---------TOE2(3) -->ZmHOX2a(2)       --------->SPL7      ----------->GT1-------->P         <-------GAMYB--------->ANAC46 ===================================MYC_MYB <---------ICU4                <---------MYB46(3)   ctggtcgatcaggtactcatgcgaacgcacgacaggtctgagtccgtaattacgtctctacctgagacgagtttggaggttgaaggttccacgacggttt  23672700                                                    <-----------HVH21                                                  >>>>>>>>>>BZIP12                                                  >>>>>>>>>>ABI5                                                  <-------MYC3                                                  ------->MYC3                                                 --------->O2                                                 =====================MYC_MYB                                                 <---------TGA1a                                                 <---------O2                                             --------->LBD16                                            --------->RRTF1(2)                                            --------->ANAC58                                            --------->RAP2.3(2)                                            --------->RAP2.6(2)                                            --------->ANAC46                                            --------->ANAC58                  --------->AtLEC2         --------->RAP2.3(1)              <------NtERF2               --------->At4g35610        <---------ANAC46             ---             ------>NtERF2                --------->ZAT2--------->At4g35610                  <-------             <---------DEAR3(2)         <-----------RAV1(2)         ---------->ID1           <-------            <---------DEAR3(1)    <---------At4g35610   <---------At4g35610      --------->ANAC58 <--          <-----------HVH21  <---------ARR14(2)  --------->TGA1a  <-----------RAV1(1)        --------      <---------ZAT2  <---------At4g35610 <---------At4g35610 <-------GAMYB      --------->ANAC58 <--   ttgatcagagctcgtcggctatgcagaagcggtttcagcgtctcagccgcaacgtgtcagaggcgattgtgtcgcttaaaaacacgcttaatctggattc  23672800                                                                 <------NtERF2                                                               <---------ANAC46                                                              <---------At4g35610                                                              <---------LBD16                                                              --------->ATERF1(1)                                                              <------NtERF2                                                              --------->RAP2.3(1)                                                              --------->At4g35610                                                             <---------DEAR4(2)                                                             ------>NtERF2                                                             <---------RRTF1(1)                                                             <---------RAP2.3(1)                                                             <---------ORA47(2)                                                             <---------ATERF1(1)                                                             <---------ERF1                                                             <---------RAP2.6(1)                                                            <---------RRTF1(2)                                                            <---------ANAC46                                                            --------->ALFIN1                                                            <---------DEAR3(1)                                                            --------->ATERF1(2)                                                            --------->DEAR3(1)                                                            <---------ATERF1(2)                                                            <---------RAP2.3(2)                                                            <---------RRTF1(3)                                                            <---------RAP2.6(2)                                                            <---------RAP2.3(3)                                                           --------->ATERF1(1)                                                           <------NtERF2                                                           <---------At4g35610                                                           --------->RAP2.3(1)                                                           --------->DREB2C(1)                                                           --------->At4g35610                                                           <---------ABI4(1)                                                           --------->DEAR4(2)                                                          <---------ERF1                                                          <---------DEAR4(2)                                                          <---------RRTF1(1)                                                          <---------RAP2.3(1)                                                          <---------RAP2.6(1)                                                          <---------ATERF1(1)                                                          <---------ORA47(2)                                                          ------>NtERF2                                                         --------->DEAR3(1)                                                         <---------RAP2.6(2)                                                         <---------RAP2.3(3)                                                         <---------RRTF1(2)                                                         <---------DEAR3(1)                                                         <---------ANAC46                                                         --------->ALFIN1                                                         <---------RAP2.3(2)                                                         <---------ATERF1(2)                                                         --------->ATERF1(2)                                                         <---------RRTF1(3)                                                        --------->DEAR4(2)                                                        <---------ABI4(1)                                                        --------->ATERF1(1)                                                        <------NtERF2                                                        --------->At4g35610                                                        --------->DREB2C(1)                                                        <---------At4g35610                                                       <---------DEAR4(2)                                                       <---------RAP2.6(1)                                                       ------>NtERF2                                                       <---------ATERF1(1)                                                       <---------ERF1                                                       <---------ORA47(2)                                                       <---------RAP2.3(1)                                                       <---------RRTF1(1)                                                      <---------ATERF1(2)                                                      <---------ANAC46                                                      <---------DEAR3(1)                                                      --------->ATERF1(2)                                                      <---------DREB2C(2)                                                      <---------RAP2.3(2)                                                      <---------ANAC58                                                      <---------RRTF1(2)                                 ------>NtERF2        <---------RRTF1(3)     <---------KAN4(2) <------NtERF2                  <---------RAP2.6(2)                          -- <---------LBD16      --------->LBD16                 <---------RAP2.3(3)                          -- ------>ZAT2         <---------DEAR3(1)               <---------ANAC58                             <- --GLK1(2)--------->YAB1     ----------->HVH21       --------->ATERF1(1)                           <- --ARR14(2)         <---------LBD16                  <---------ABI4(1)                            --- -------At4g35610   <---------At4g35610            --------->ALFIN1     <---------At4g35610      <--- ->ARR14(2)       <---------DEAR3(1)       <------NtERF2--------->RAP2.3(1)             --------->ZAT14 -------ZAT2      <---------RAP2.6(2) xxxxxxxxxxxxxxxx>smallRNA(s)      <---------ZAT2  <---------ZAT14   tgctcgggataatcagagtttcggcggagctatgacgcccaaggcggaagtcagtggcggcggcggcggaaggaagctcgtttgggctactgtagtgaag  23672900                 ------>ZmHOX2a(1)                --------->TOE1(2)                --------->TOE2(2)                                                                 ---                <---------LBD16                                                                   <--             <---------ARR14(2)                                                                  ----             ------->TEIL     <---------LBD16                                                    <--- ------->HSFB2a(1)           --------->MYB52(1)                                                  <--- ------->HSFC1(2)<---------HSFB2a(2)                                                             <--- --------HSFC1(2)--------->LBD16                                       <---------ANAC58  --------->TOE2(2) --------HSFB2a(1)       --------->WOX13(1)<---------CCA1(2)           <---------ANAC58 ----------->RAV1(2) ---->TEIL   --------->ARR14(2) --------->LBD16 <---------CCA1(2)<---------YAB1  <---------TOE2(3)<-- ------ARR14(2)----------->RAV1(2)   --------->GLK1(2)      <---------ICU4 ----------------->AGL1----   aaccttgctaagatgtatcctgggagtcaattaccggagaagctcgtatcaaatctcaagaagcattacgattccttgccattcaggtaaacctgagttt  23673000  Previous    Next  AGI:  At5g58520.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G07140.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21408.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 23672460    to: 23675388    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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