Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                --------->ANAC55(2)  --------->CCA1(2)                                                       <----------DOF2 --------->ARR11(3)                                                      --------->TOE2(3) --------->ARR14(2)                                          --------->ZAT2   <---------TOE2(3) <---------GLK1(2)                                           --------->At4g35610 <---------ARR11(3)                                          <---------At4g35610   <-------TEIL <---------ARR14(2)                              <-----------HVH21  --------->At4g35610     --------- --------->ARR10                    --------->MYB52(1)  ------->TEIL<---------At4g35610 ---------->DOF2 --->DOF2                   <-------GAMYB ----------->HVH21  <---------ZAT2  <---------LBD16<--------   gaagatactcgattcgaactctgtttccaccgttgaagtaacgagtgacattgtcatgtacccagctctctgctacctttacggatgcattcaagctctt  23659800                                                                         <------NtERF2                             <---------------AGL15                    <------NtERF2                             --------------->AGL15                   <---------DEAR3(2)                            ----------------->AGL2                  <---------DEAR3(1)                            ----------------->AGL3          <----------DOF2                         <                            <-----------------AGL3       --------->ARR11(3)    <---------ARR11(3) <--                          <---------bZIP60(1)            <---------ARR11(3)    --------->ARR11(3) <-- >ARR11(3)         <---------MYB52(1)            <---------ZAT2     --------->ETT(1)              <-- -ARR11(3)       <---------YAB1                  --------->ZAT2    --------->RAP2.6(3) <----------DOF2   gagcatcgaattttggattccgatagtgacaccaatattagaaccagagagagctcggagaacttttgggtcggcatcgaagagcttcactttgacaatg  23659900                                                                                               ======                                                                                               ------                                                                                       --------->KAN4(2)           <---------GLK1(2)                                                        <-------GAMYB          <---------At4g35610                         <-----------HVH21             =================        <---------HSFB2a(2)                     --------->HSFC1(2)                 <---------MYB46(3)     <---------GLK1(1)                      ----------->HVH21              <---------ZAT14    ------- ---------MYB52(1)                         --------->SPL7   <---------ALFIN1   ----------->HVH21 -------ANAC58                    <------NtERF2 <---------HSFC1(2)      <---------At4g35610  <------- -------ANAC58                 <---------LBD16  --------->HSFB2a(1)     <---------ZAT2<---------MYB46(3) -------ANAC46         --------->TOE2(3)  --------->ALFIN1 --------->LBD16 --------->ZAT14  ---------   ccgtttgatttcagaagctctacaacctttgaaggcggaagagggtgcgacgcttctgtcccccaatttatgccaactgctctgacggttgttcccgtca  23660000                    --------->ALFIN1                 <------NtERF2                ------>NtERF2                <---------RAP2.3(1)               <---------RAP2.6(2)               <---------RAP2.3(3)               <---------DEAR3(1)               <---------ANAC46               --------->ATERF1(2)              --------->RAP2.6(3)             --------->MYB52(1)            ----------->HVH21            ----------->TGA1           <-----------HVH21                                                        <---------ANAC58          <---------ANAC58            ----------->HVH21                          <-----------RAV1(1)          <---------O2                ------->GAMYB                            *TSS --------->ETT(1)          <---------TGA1a             --------->DEAR3(1)            --------->SPL7  <---------ANAC58          --------->O2 --------->ALFIN1 <------NtERF2            --------->TOE1(1) --------->ALFIN1          ====================================MYC_MYB            --------->TOE2(1)<-----------HVH21          <---------ANAC46           --------->DEAR3(2)         --------------->AtSPL8  <---------ALFIN1<---------ANAC46  <---------At4g35610         --------------->AtSPL3 ===================bZIP_DOF        --------->At4g35610         <---------------AtSPL3 ---->DOF2<---------ANAC58  <------ZmHOX2a(1)           ----------->GT1    --------->ANAC58 ===================MYC_MYB----------->GT1 --------->ANAC58  <---------ARR14(2)<---------ICU4 -->WRKY18(1)--------->REM1(2)    --------->MYB46(3)<---------ARR14(2)     --------->ANAC46 ----HVH21--------->TGA1a<------ZmHOX2a(1) --------->ANAC58  ------->TEIL  --------->ANAC58      ---- >ANAC46------>NtERF2 <------ZmHOX2a(1)------>NtERF2--------->ARR14(2)    --------->LBD16 <------NtERF2   agctcaaccctgccgtgacggcgaggaggaggagaaacagccgacgagccatcaaatccagtgaatctcgtacttccacgataatgtcgggccgagaaat  23660100                                   --------->ANAC58                                   --------->ANAC46                                   --------->ANAC58                                 <-----------GT1                      --------->ANAC58                            <---------ANAC58                          --------->ANAC46                            <---------ANAC46         <---------MYB52(1)                       <---------ANAC58      --------->At4g35610      <----------ID1         <-------                       <---------ANAC46    <---------GLK1(2)<---------At4g35610              <-------          <----------ID1    <---------ANAC58 <---------At4g35610      --------->ANAC58 <------------CBF -------->CBF          <---------ANAC58   <---------At4g35610    --------->YAB1<---------MYB46(3)   tcaatgtttaaaaaaacaaaacactgcgtgccgtttcacgactcagcatctcactgttatttagctatcaaaacgacacggtgtttagaaattgggcttg  23660200                                                                                                  <--                                                                                                  ---                                                                                                 ----                                                                                               <-----                                                                                               ------                                                                                             --------                     <---------ICU4                                                         ---------                  --------->YAB1                                                       <---------YAB1                  <---------ICU4                                                      --------->TOE2(3)                 <---------YAB1                                                      <---------ICU4               --------->YAB1                                                        --------->YAB1               <---------ICU4               *TSS                                  --------->WOX13(1) --ANAC58     --------->ICU4             --------->At4g35610            --------->At4g35610 --------- --ANAC58     <---------ATHB12   ----------->GT1                     ---------->DOF2<---------ATHB12   ggcttcacattccctaatcatcatcatctctgaaatagaaattatctgaaacttagagagacagagagagagaaagctcaaattcaatcatcaatgttaa  23660300                                   <---------MYB46(3)                              --------->ATERF1(1)                              <------NtERF2                             ------>NtERF2                                      <---------ATERF1(1)                             ----------->RAV1(1)                               <---------ARR14(2)                            --------->RAP2.3(3)                                --------->ARR14(2)                            --------->DEAR3(1)                                -----------------------                            --------->RAP2.3(2)                               <------NtERF2       ---                           --------->ERF1                                   <---------DEAR3(1)    ---                           --------->RAP2.3(1)                             <---------LBD16     ------                           --------->ATERF1(1)              <-----------HVH21<---------ATERF1(1)<----                           --------->RRTF1(1)              --------->WOX13(1)------>NtERF2    <------                          <---------ATERF1(1)          <------MYB46(1)     ------>NtERF2    ------>NtERF2                         <---------DEAR3(1)            <------MYB83        <---------At4g35610------- -------SPL7             --------->DEAR3(1)           <---------MYB46(3)   --------->LBD16 --------->bZIP60(2) ---->GAMYB             --------->DEAR3(2)           <---------ANAC58    <---------LBD16   --------->ANAC58 ----->MYB46(3)         --------->At4g35610          <---------ANAC46   ------>ZmHOX2a(1)  --------->ANAC46 ----DOF5.7(2)          <---------LBD16          <-------PIF5          <---------ALFIN1    --------->O2 --->MYB52(1)           <---------At4g35610      ------->PIF5       <---------ALFIN1       --------->ANAC58 ->DOF5.7(2)            --------->ATERF1(1)     <---------TGA1a <---------At4g35610      <---------ALFIN1 >TOE2(3)            ----------->HVH21    <---------At4g35610   --------->At4g35610     <---------WRKY12 >YAB1              <-----------HVH21  <------NtERF2 <---------ANAC58------>ZmHOX2a(1)<-----------HVH21   cggacgagagagaagtagtctgtgtcaccggcgccagtggctgcatcggctcgtggctggtccatcagctcctcctccgcggctactccgtccacgccac  23660400       --------->TOE2(2) >TaNAC69(2)    <---------ICU4 ------>At5g28300 ------>LBD16   --------->YAB1 >NtERF2   --------->LBD16                                                                     <----- --NtERF2 --------->ANAC55(2)                                      <---------ICU4           <-------- ---ALFIN1--------->ANAC46  <-----------GT1                       ------>ZmHOX2a(1)  --------->ALFIN1 -->DEAR3(1)<---------MYB52(1)                           <-----------HVH21           <-----------RAV1(1)   cgtgaaaaacctccgtaatcttcacaaatttctctcttcgattacgcttctggttaccctatcacctcctaattcccttacatttctgtgttgcagagga  23660500                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                           <---------ATERF1(1)                                                                                           <---------RAP2.3(1)                                                                                  ------>NtERF2                                  --------->At4g35610                    --------->REM1(1) --------->LBD16                       --------->ARR11(3)  --------->ANAC46            ------>ZmHOX2a(1)   ------>NtERF2                 <---------HSFC1(1)        --------->ANAC55(1)     ------>ZmHOX2a(2)       --------->At4g35610                 <---------HSFB2a(2)       --------->ANAC58       --------->GLK1(1)        <---------At4g35610                 --------->HSFB2a(2)   <---------ALFIN1           <---------GLK1(1)       --------->ANAC46              --------->ARR11(3)  <-------TEIL                   <---------ARR14(2)      <---------LBD16        --------->ANAC58  --------->HSFB2a(2)                    <---------ARR11(3)    <---------ARR14(2)        --------->ANAC58  <---------HSFB2a(2)                    --------->ARR11(3)    --------->ARR14(2)      --------->CCA1(2)<---------ARR11(3)  --------->ANAC58      <---------AGP1  <---------ALFIN1     <----------ID1    <---------ARR14(3)<---------ALFIN1        --------->ARR14(2)   <---------MYB52(1) ---------->DOF2 --------->HSFC1(1)  ------>NtERF2        <---------HSFB2a(2) --------->ANAC58 <----- -ZmHOX2a(1)--------->HSFC1(2)   --------->ALFIN1         --------->HSFB2a(2) --------->ANAC58<------ -At4g35610 <---------HSFC1(2)<---------TOE1(2)------>NtERF2     ------->TEIL --------->ANAC46------>NtERF2   tgagaaagagacgaaacatctagaaggtctcgaaggtgcagccacacgcctccatctattcgagatggatctcctacaatacgacaccgtttccgccgcc  23660600     <--------P   <---------MYB46(3)   --------->ATHB12  <---------ATHB12 ->ATERF1(2) ->RAP2.6(2) ->RAP2.3(2) --ATERF1(2) ->RRTF1(3)                                                       <---------GLK1(2) ->RAP2.3(3)                                                    <---------TOE1(2) ->DEAR3(1)            --------->ZAT2                          <-----------RAV1(2) ->DREB2C(2)           --------->ANAC46                       <---------LBD16 ->RRTF1(2)          <---------ALFIN1                       ------>ZmHOX2a(2) ->ANAC46        <---------ARR14(2)                         =====================================HOX2a_HOX2a >ORA47(2)       --------->ARR14(2)                        <------ZmHOX2a(2)                     ---- >RAP2.3(1)   <---------ANAC58                            <---------ARR14(2)                     ---- >RAP2.6(1)   <---------ANAC46                            --------->ARR14(3)              <------ZmHOX2a(1) >ERF1      ------>NtERF2                                 <---------ARR14(3)             <----------ID1 >RRTF1(1)  --------->LBD16                <---------------------WRI1                  --------->DAG2 >ATERF1(1)<---------DEAR3(1)            <---------ANAC46 --------->ARR14(2)          ---------->DOF2 -NtERF2  <---------LBD16             <---------CCA1(2)   <---------ARR11(3)     <-----------------AGL1 ---ATERF1(1) <---------ANAC58 <---------ALFIN1           --------->ARR11(3) <---------ALFIN1   <----   atcaatggttgctccggcgtattccacctcgcatcaccttgtatcgtcgatgaagtccaagatccccaggttctaatctccactcccaaaaaggaccaat  23660700  Previous    Next  AGI:  At5g58480.1    Description:  glycosyl hydrolase family 17 protein. Identical to Putative glucan endo-1,3-beta-glucosidase 9 precursor [Arabidopsis Thaliana] (GB:Q9FGH4); similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT4G17180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41173.1); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490); contains InterPro domain X8 (InterPro:IPR012946); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 23658368    to: 23660079    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g58490.1    Description:  cinnamoyl-CoA reductase family. similar to cinnamoyl-CoA reductase family [Arabidopsis thaliana] (TAIR:AT2G02400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21401.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 23660244    to: 23661824    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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